; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G199310 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G199310
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSmr domain-containing protein
Genome locationchrH11:19787961..19788756
RNA-Seq ExpressionChy11G199310
SyntenyChy11G199310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143157.1 SMR domain-containing protein At5g58720 isoform X1 [Cucumis sativus]3.26e-10095.51Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQARVGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKR+VASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

XP_016903146.1 PREDICTED: SMR domain-containing protein At5g58720 isoform X4 [Cucumis melo]1.17e-9290.45Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+ARVGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

XP_016903147.1 PREDICTED: SMR domain-containing protein At5g58720 isoform X5 [Cucumis melo]1.17e-9290.45Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+ARVGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

XP_031742717.1 SMR domain-containing protein At5g58720 isoform X2 [Cucumis sativus]6.53e-10195.51Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQARVGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKR+VASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

XP_031742718.1 SMR domain-containing protein At5g58720 isoform X3 [Cucumis sativus]6.15e-10195.51Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQARVGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKR+VASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

TrEMBL top hitse value%identityAlignment
A0A0A0KFA5 Smr domain-containing protein5.5e-8095.51Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQARVGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKR+VASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

A0A1S4E4I2 SMR domain-containing protein At5g58720 isoform X11.7e-7390.45Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+ARVGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

A0A1S4E4J9 SMR domain-containing protein At5g58720 isoform X51.7e-7390.45Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+ARVGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

A0A1S4E596 SMR domain-containing protein At5g58720 isoform X31.7e-7390.45Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+ARVGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

A0A5D3CV78 SMR domain-containing protein1.7e-7390.45Show/hide
Query:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL
        MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+ARVGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVL
Subjt:  MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVL

Query:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
        DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Subjt:  DYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC

SwissProt top hitse value%identityAlignment
O65573 SMR domain-containing protein At5g587207.3e-1335.35Show/hide
Query:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-
        KN   KKKK+     P+   T +    KD               NV  N ++++ EA        ++A+  +    +++ A + L + V+S DD +T+S 
Subjt:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-

Query:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG
         S SS   TAS+S     SS   SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K           +++AEQFL SMLG
Subjt:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG

Query:  DECELSMAVVRDVLC
        D+CELSMAVVRDVLC
Subjt:  DECELSMAVVRDVLC

Arabidopsis top hitse value%identityAlignment
AT5G58720.1 smr (Small MutS Related) domain-containing protein5.2e-1435.35Show/hide
Query:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-
        KN   KKKK+     P+   T +    KD               NV  N ++++ EA        ++A+  +    +++ A + L + V+S DD +T+S 
Subjt:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-

Query:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG
         S SS   TAS+S     SS   SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K           +++AEQFL SMLG
Subjt:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG

Query:  DECELSMAVVRDVLC
        D+CELSMAVVRDVLC
Subjt:  DECELSMAVVRDVLC

AT5G58720.2 smr (Small MutS Related) domain-containing protein5.2e-1435.35Show/hide
Query:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-
        KN   KKKK+     P+   T +    KD               NV  N ++++ EA        ++A+  +    +++ A + L + V+S DD +T+S 
Subjt:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-

Query:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG
         S SS   TAS+S     SS   SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K           +++AEQFL SMLG
Subjt:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG

Query:  DECELSMAVVRDVLC
        D+CELSMAVVRDVLC
Subjt:  DECELSMAVVRDVLC

AT5G58720.3 smr (Small MutS Related) domain-containing protein5.2e-1435.35Show/hide
Query:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-
        KN   KKKK+     P+   T +    KD               NV  N ++++ EA        ++A+  +    +++ A + L + V+S DD +T+S 
Subjt:  KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-------SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS-

Query:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG
         S SS   TAS+S     SS   SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K           +++AEQFL SMLG
Subjt:  -SSSSSAITASSS----SSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---------FSQQEAEQFLCSMLG

Query:  DECELSMAVVRDVLC
        D+CELSMAVVRDVLC
Subjt:  DECELSMAVVRDVLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACCCTAAGAATAAGAAGAAGAAGAAGAAGATCATCCCATCGCCGGCGTTGGGATCCACCCCTGCTACTATTGTTGCCAAAGATAATGTTACTAATGCCGTCGA
TGCAGTGACGGAGGCGTTATCTGTGGCTTCTCTTAACGATCCCTCGTTACCTGTTTCTAGACAAGCTAGGGTTGGTCTGGATGAAGACGTTGATAGTTTTGACGATTTGG
CTACGACTTCTTCCTCGTCTTCAAGTGCGATCACGGCTTCGAGTTCGAGTTCGAGTTGGTATTCCTCTGAGGATGTTTTAGATTATAAAGGTTATATGGGGAAGAAACAG
AAACGGGTCGTTGCTTCTACGGGAACAATATCTACGGTTTTAGGGAAGGATTATGTTCGGTCCTCATTGAAAAGGGATTCGAGGAATAAATTCATGGAGTTTGACCGTGG
GAAGTTTTCTCAACAGGAGGCAGAGCAATTCCTTTGCTCCATGTTAGGGGATGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTATGTTTCAGTACTCTAATAA
TCTGGGAGAGAAAGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACCCTAAGAATAAGAAGAAGAAGAAGAAGATCATCCCATCGCCGGCGTTGGGATCCACCCCTGCTACTATTGTTGCCAAAGATAATGTTACTAATGCCGTCGA
TGCAGTGACGGAGGCGTTATCTGTGGCTTCTCTTAACGATCCCTCGTTACCTGTTTCTAGACAAGCTAGGGTTGGTCTGGATGAAGACGTTGATAGTTTTGACGATTTGG
CTACGACTTCTTCCTCGTCTTCAAGTGCGATCACGGCTTCGAGTTCGAGTTCGAGTTGGTATTCCTCTGAGGATGTTTTAGATTATAAAGGTTATATGGGGAAGAAACAG
AAACGGGTCGTTGCTTCTACGGGAACAATATCTACGGTTTTAGGGAAGGATTATGTTCGGTCCTCATTGAAAAGGGATTCGAGGAATAAATTCATGGAGTTTGACCGTGG
GAAGTTTTCTCAACAGGAGGCAGAGCAATTCCTTTGCTCCATGTTAGGGGATGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTATGTTTCAGTACTCTAATAA
TCTGGGAGAGAAAGTTCTAG
Protein sequenceShow/hide protein sequence
MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQ
KRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLCFSTLIIWERKF