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Chy11G199640 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G199640
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSWR1 complex subunit 6
Genome locationchrH11:20166395..20168353
RNA-Seq ExpressionChy11G199640
SyntenyChy11G199640
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0042742 - defense response to bacterium (biological process)
GO:0043486 - histone exchange (biological process)
GO:0048638 - regulation of developmental growth (biological process)
GO:0000812 - Swr1 complex (cellular component)
GO:0031491 - nucleosome binding (molecular function)
GO:0042802 - identical protein binding (molecular function)
InterPro domainsIPR007529 - Zinc finger, HIT-type
IPR039723 - Vps71/ZNHIT1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143171.1 SWR1 complex subunit 6 [Cucumis sativus]1.69e-11399.42Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHE NLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_008463835.1 PREDICTED: SWR1 complex subunit 6 [Cucumis melo]1.97e-11298.25Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+EVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHE NLESLPPHVPSY KAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_022943643.1 SWR1 complex subunit 6 [Cucurbita moschata]5.18e-10693.02Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHE +LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_023512985.1 SWR1 complex subunit 6 isoform X1 [Cucurbita pepo subsp. pepo]1.04e-10593.02Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHE +LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

XP_038901863.1 SWR1 complex subunit 6 [Benincasa hispida]1.88e-10895.93Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TNPFRRMSSR RKVAPKMVAALASSDNRTQAALARLEALENDNAGVE VENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHE NLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

TrEMBL top hitse value%identityAlignment
A0A0A0KH15 HIT-type domain-containing protein5.5e-8799.42Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHE NLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A1S3CKL9 SWR1 complex subunit 63.6e-8698.25Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
        MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+EVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFME

Query:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        LLHE NLESLPPHVPSY KAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
Subjt:  LLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A6J1D2Z0 SWR1 complex subunit 6 isoform X12.2e-8093.02Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+E+VENIDDEDASLDDDD AYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHE NLESLPP+VPSYLKAAVGPPSS+SRRHFCTVCGFAA+YTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A6J1FTL5 SWR1 complex subunit 62.7e-8193.02Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHE +LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

A0A6J1JHH9 SWR1 complex subunit 64.5e-8192.44Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+E++ENIDDEDASLDDD+QAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        ELLHE +LESLPPHVPSY+KAAVGPPSSTSRRHFCTVCGFAASYTCIRCG+RFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

SwissProt top hitse value%identityAlignment
O43257 Zinc finger HIT domain-containing protein 15.1e-1335.67Show/hide
Query:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF
        ++ S R++    + V   A+   R      +LEALENDN         DD  A L           DD D    K++++G   K R           K F
Subjt:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF
          LL E+NL       P+YL A  GPP S  +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF

Q24JY4 Zinc finger HIT domain-containing protein 15.1e-1335.67Show/hide
Query:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF
        ++ S R++    + V   A+   R      +LEALENDN         DD  A L           DD D    K++++G   K R           K F
Subjt:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF
          LL E+NL       P+YL A  GPP S  +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF

Q54NW0 Zinc finger HIT domain-containing protein 1 homolog4.9e-1633.96Show/hide
Query:  SSRTRKVAPKMVAALASSDNRT---QAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRK--TRQAKALEAKKAPKTFMELLHEENL
        SS+ +    K     +  D R    +   ARLE+L++DN    +    D+ED   +DD+   +       KR    R+ K  E K     F ++L +  L
Subjt:  SSRTRKVAPKMVAALASSDNRT---QAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRK--TRQAKALEAKKAPKTFMELLHEENL

Query:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRC
        E+ P HVP+Y+ +    PS    RHFC++CG+  +YTC +C  R+CS +C N HN+TRC
Subjt:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRC

Q8R331 Zinc finger HIT domain-containing protein 13.5e-1439.72Show/hide
Query:  RLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEENLESLPPHVPSYLKAAVGPPSST
        +LEALENDN         DD  A L           DD D    K++++G   K R           K F  LL E+NL +     P+YL A  GPP S 
Subjt:  RLEALENDNAGVEVVENIDDEDASL-----------DDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEENLESLPPHVPSYLKAAVGPPSST

Query:  SRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF
         +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  SRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKF

Q9FHW2 SWR1 complex subunit 63.2e-6071.1Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF
        M+++ +N  RR+S+RTRKVA KM AAL S+DNRTQAA+ARLEALENDN  +EV++  DDE+ASLD DDD  Y+ K+Q KG+KRKTRQAKALEA+KAPK+F
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        +ELL E NLESLP HVP+YLKAAVGPPSS+SRR+FC+VCG+ A Y C  CG+RFCS RCQNIH DTRC KFVA
Subjt:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA

Arabidopsis top hitse value%identityAlignment
AT5G37055.1 HIT-type Zinc finger family protein2.3e-6171.1Show/hide
Query:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF
        M+++ +N  RR+S+RTRKVA KM AAL S+DNRTQAA+ARLEALENDN  +EV++  DDE+ASLD DDD  Y+ K+Q KG+KRKTRQAKALEA+KAPK+F
Subjt:  MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLD-DDDQAYI-KRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA
        +ELL E NLESLP HVP+YLKAAVGPPSS+SRR+FC+VCG+ A Y C  CG+RFCS RCQNIH DTRC KFVA
Subjt:  MELLHEENLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGATTCTACGAATCCATTCCGACGTATGTCGAGCCGTACTCGGAAGGTTGCTCCTAAGATGGTTGCTGCCCTAGCCAGCAGCGACAACCGTACGCAGGCAGC
ACTTGCTCGTCTCGAGGCATTGGAAAATGACAATGCGGGAGTGGAAGTAGTCGAAAACATTGATGATGAGGATGCTTCTCTCGATGATGATGATCAAGCATACATAAAGC
GGCAATCAAAGGGCACTAAACGGAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAAGCTCCCAAAACTTTTATGGAGCTTCTGCACGAGGAAAATTTGGAGTCATTG
CCTCCACATGTTCCATCATACTTGAAGGCGGCCGTTGGACCTCCAAGCTCTACCTCACGCCGGCATTTCTGCACAGTTTGCGGTTTTGCTGCGAGCTACACGTGCATAAG
GTGTGGAATCCGCTTTTGTTCATCTCGTTGCCAGAATATACATAACGATACTCGTTGTTTGAAATTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGATTCTACGAATCCATTCCGACGTATGTCGAGCCGTACTCGGAAGGTTGCTCCTAAGATGGTTGCTGCCCTAGCCAGCAGCGACAACCGTACGCAGGCAGC
ACTTGCTCGTCTCGAGGCATTGGAAAATGACAATGCGGGAGTGGAAGTAGTCGAAAACATTGATGATGAGGATGCTTCTCTCGATGATGATGATCAAGCATACATAAAGC
GGCAATCAAAGGGCACTAAACGGAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAAGCTCCCAAAACTTTTATGGAGCTTCTGCACGAGGAAAATTTGGAGTCATTG
CCTCCACATGTTCCATCATACTTGAAGGCGGCCGTTGGACCTCCAAGCTCTACCTCACGCCGGCATTTCTGCACAGTTTGCGGTTTTGCTGCGAGCTACACGTGCATAAG
GTGTGGAATCCGCTTTTGTTCATCTCGTTGCCAGAATATACATAACGATACTCGTTGTTTGAAATTTGTTGCCTAA
Protein sequenceShow/hide protein sequence
MDDDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDDQAYIKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEENLESL
PPHVPSYLKAAVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA