; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G200630 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G200630
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionE3 ubiquitin-protein ligase Topors
Genome locationchrH11:21561865..21566745
RNA-Seq ExpressionChy11G200630
SyntenyChy11G200630
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006513 - protein monoubiquitination (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646983.1 hypothetical protein Csa_020881 [Cucumis sativus]0.076.33Show/hide
Query:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN
        M  SSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL TSN
Subjt:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN

Query:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER
        CSDKLKVGVGSSQ DARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCI+AVPSSVRSCLELN+LGSRGGKEVILER
Subjt:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER

Query:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVVLPVGINVYFPLQ
        IKPWIQRELQVILEDPDPTIIVHLVISLFVAR+EATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV +   I V   ++
Subjt:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVVLPVGINVYFPLQ

Query:  NSNSRSTSPPNFAISKPPLPSISLFNTTA-----TADSNSFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFC
        +S           +S  P  ++     T+     TADSNSFTVTYLINSCSF+PASALSISKHVTFHSPEKPDSVISFFKNQ F NADISFIV       
Subjt:  NSNSRSTSPPNFAISKPPLPSISLFNTTA-----TADSNSFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFC

Query:  YLIPTKPFCPNSSFFTPKVLRLPNSRTSSSYFCMSLGRFWESLDDMLKMGFDPSKLRFVVAVYCKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWC
           P K   P   F   +                                          AVYCK+SL+KSTW RKLGVYKSWGLSEEQILAGFRCHPWC
Subjt:  YLIPTKPFCPNSSFFTPKVLRLPNSRTSSSYFCMSLGRFWESLDDMLKMGFDPSKLRFVVAVYCKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWC

Query:  LKISEEKITSGMEFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFMLLSPYRCTESRFLGKYFHPHLKKVPQLSKLYHANVHDG
        LKISEEKI SGM+FFVN LGWEATAVIKRPD+LSLSLKNTIIPRASVLLCLFQNGLIRKKFML+SPYR TESRFLGKYFHPHLKKV              
Subjt:  LKISEEKITSGMEFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFMLLSPYRCTESRFLGKYFHPHLKKVPQLSKLYHANVHDG

Query:  ILKHSLYVVSDDLSLVEKRWK
                 SDDLSLVEKRWK
Subjt:  ILKHSLYVVSDDLSLVEKRWK

KAG7026294.1 E3 ubiquitin-protein ligase Topors, partial [Cucurbita argyrosperma subsp. argyrosperma]1.83e-16683.33Show/hide
Query:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL
        STREPARKL GENF+ KVISPAICGETCPICLRELEDRTAAVLTTCIHAYC+ CIRKWSNLKRTCPLCNAQFDSWF+KI LSS+SFRKERL   NC+D L
Subjt:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL

Query:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI
        K+G+GSS+TDAR ILQSTR EL+R+RRSER LTWRRSFGRRGP+S+P DV+  RK QWRASIY+RCI+A PSSVRSCL +N+ GS G KE ILERIKPWI
Subjt:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI

Query:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        QREL+ IL DPDPTIIVHLV SLFVARLEA SSQLNAE+DFLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Subjt:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

XP_004143083.1 E3 ubiquitin-protein ligase Topors [Cucumis sativus]1.63e-19797.21Show/hide
Query:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN
        M  SSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL TSN
Subjt:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN

Query:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER
        CSDKLKVGVGSSQ DARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCI+AVPSSVRSCLELN+LGSRGGKEVILER
Subjt:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER

Query:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        IKPWIQRELQVILEDPDPTIIVHLVISLFVAR+EATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
Subjt:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

XP_008458477.1 PREDICTED: E3 ubiquitin-protein ligase Topors [Cucumis melo]1.08e-19596.86Show/hide
Query:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN
        M  SSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL TSN
Subjt:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN

Query:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER
        CS+KLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRK QWRASIYNRCI+AVPSSVRSCLELNILG+RGGKEVILER
Subjt:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER

Query:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYR+V
Subjt:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

XP_038875512.1 E3 ubiquitin-protein ligase Topors isoform X1 [Benincasa hispida]1.31e-17589.01Show/hide
Query:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL
        STREPA KLNGENFI+KVISPAICGETCPICL EL+DRTAAVLTTCIHAYCI CIRKWSNLKRTCPLCNAQFDSWF KINLSS+SFR ERL T NC DKL
Subjt:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL

Query:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI
        K+GVGSS+TDARGILQSTR ELNRERRSERSLTWRRSFGRRGP+S+PADVV  R+ QWRASIYNRCI+A+PSSVRSCLELNILGSRG KE ILERIKPWI
Subjt:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI

Query:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        +RELQ ILEDPDPTIIVHLVISLFVARLE  S QLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Subjt:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

TrEMBL top hitse value%identityAlignment
A0A0A0KCD1 RING-type domain-containing protein1.6e-15797.21Show/hide
Query:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN
        M  SSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL TSN
Subjt:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN

Query:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER
        CSDKLKVGVGSSQ DARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCI+AVPSSVRSCLELN+LGSRGGKEVILER
Subjt:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER

Query:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        IKPWIQRELQVILEDPDPTIIVHLVISLFVAR+EATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
Subjt:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

A0A1S3C7X8 E3 ubiquitin-protein ligase Topors4.0e-15696.86Show/hide
Query:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN
        M  SSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL TSN
Subjt:  MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSN

Query:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER
        CS+KLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRK QWRASIYNRCI+AVPSSVRSCLELNILG+RGGKEVILER
Subjt:  CSDKLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILER

Query:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYR+V
Subjt:  IKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

A0A6J1CAG7 E3 ubiquitin-protein ligase Topors2.2e-12278.37Show/hide
Query:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL
        +TREP RKLN ENF++KVISPAICGETCPICLREL+D T AVLT+CIHAYC+ CIRKWS LKRTCPLCNAQF+SWF+KIN SS SFRKE L T NC DKL
Subjt:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL

Query:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI
          GVGSS+ D+R +LQ  R ELNR RRSE  LTWRRSFGRRG + +PADV+ +RK QWRASIYNR I+AVPSSVR   ELNI GS G KE ILE+IKPWI
Subjt:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI

Query:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        QRELQ ILEDPDPTIIVHLV SLFV+RLEA SSQLN EDDFL  L PFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRTV
Subjt:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

A0A6J1EQ79 E3 ubiquitin-protein ligase Topors isoform X13.1e-13282.98Show/hide
Query:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL
        ST EPARKLNGENF+ KVISPAICGETCPICLRELEDR AAVLTTCIHAYC+ CIRKWSNLKRTCPLCNAQFDSWF+KI LSS+SFRKERL   NC+D L
Subjt:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL

Query:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI
        K+G+GSS+TDAR ILQSTR EL+R+RRSER LTWRRSFGRRGP+S+P DV+  RK QWRASIY+R I+AVPSSVRSCL +N+ GS G KE ILERIKPWI
Subjt:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI

Query:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        QREL+ IL DPDPTIIVHLV SLFVARLEA SSQLNAE+DFLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Subjt:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

A0A6J1KEK6 E3 ubiquitin-protein ligase Topors isoform X14.8e-13383.33Show/hide
Query:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL
        ST EPARKLNGENF+ KVISPAICG+TCPICLRELEDRTAAVLTTCIHAYC+ CIRKWSNLKRTCPLCNAQFDSWF KINLSS+SFRKERL   NC+D L
Subjt:  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKL

Query:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI
        K+G+GSS+TDAR ILQSTR EL+R+RRSER LTWRRSFGRRGP+S+P DV+  RK QWRASIY+R I+AVPSSVRSCL +N+ GS G KE ILERIKPWI
Subjt:  KVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWI

Query:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        QREL+ IL DPDPTIIVHLV SLFVARLEA SSQLNAE+DFLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Subjt:  QRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

SwissProt top hitse value%identityAlignment
P08393 E3 ubiquitin-protein ligase ICP04.8e-0538.3Show/hide
Query:  GETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQ
        G+ C +C  E+          C+H +CI C++ W  L+ TCPLCNA+
Subjt:  GETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQ

P29128 E3 ubiquitin-protein ligase ICP04.1e-0432.91Show/hide
Query:  TCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKLKVGVG
        +C ICL  +    AA    C+HA+C+ CIR+W   + TCPLC A   S    +            A+  C +++ VG G
Subjt:  TCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKLKVGVG

P29836 E3 ubiquitin-protein ligase ICP04.1e-0432.91Show/hide
Query:  TCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKLKVGVG
        +C ICL  +    AA    C+HA+C+ CIR+W   + TCPLC A   S    +            A+  C +++ VG G
Subjt:  TCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKLKVGVG

Q80Z37 E3 ubiquitin-protein ligase Topors3.1e-1224.85Show/hide
Query:  SSSSTREPARKLNGENFITK---------VISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKI---------
        SS      A++   +NF  K         V + A     CPICL   ++   + L  C+H +C  C+++WS  K  CPLC   FDS F  +         
Subjt:  SSSSTREPARKLNGENFITK---------VISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKI---------

Query:  --------NLSSQSFRKERLATSNCSDKLKVGVGSSQTDAR--------GILQSTRYELNRERRSERSLTWRRSFGRRGPDSL---------PADVVVRR
                + ++   R+ R  T+   ++       S T +R        G+L      ++   R      + R    RGP +            D++  R
Subjt:  --------NLSSQSFRKERLATSNCSDKLKVGVGSSQTDAR--------GILQSTRYELNRERRSERSLTWRRSFGRRGPDSL---------PADVVVRR

Query:  KRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTI-IVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKT
        +  +RA +    +R++    R   +++    R      L R+ PW++REL V+       + IV  +I   V R +  S        F+S LRPFL  +T
Subjt:  KRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTI-IVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKT

Query:  DLFWHELRCFAGSPLRMEEYDSVVEY
        + F HE   FA SP  M  +D    Y
Subjt:  DLFWHELRCFAGSPLRMEEYDSVVEY

Q9NS56 E3 ubiquitin-protein ligase Topors4.8e-1327.41Show/hide
Query:  SSSSTREPARKLNGENFITK---------VISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRK
        SS      A++   +NF  K         V + A     CPICL   ++   + L  C+H +C  C+++WS  K  CPLC   FDS F  +  +   F++
Subjt:  SSSSTREPARKLNGENFITK---------VISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRK

Query:  ERLATSNCSDKLKVGVGSSQTDARGILQSTRYELNRERR----------SERSLTWRRS---FGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVR
          L  S          GS  T  R     T   L RER           + R+ T   S   F   G  + P DV +   +  R     R   A   S+R
Subjt:  ERLATSNCSDKLKVGVGSSQTDARGILQSTRYELNRERR----------SERSLTWRRS---FGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVR

Query:  SCLELNILGSR---------------GGK------------EVILERIKPWIQRELQVILEDPDPTI-IVHLVISLFVARLEATSSQLNAEDDFLSPLRP
           E +I+  R               GG+               L R+ PW++REL V+       + IV  +I   V R +  S        F+S LRP
Subjt:  SCLELNILGSR---------------GGK------------EVILERIKPWIQRELQVILEDPDPTI-IVHLVISLFVARLEATSSQLNAEDDFLSPLRP

Query:  FLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY
        FL  +T+ F HE   FA SP  M  +D    Y
Subjt:  FLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY

Arabidopsis top hitse value%identityAlignment
AT1G21150.1 Mitochondrial transcription termination factor family protein4.3e-2526.65Show/hide
Query:  SFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTKPFCPNSSFF----------------TPKV----
        SFTV+YL++SC  +  SA S S+ V   S +KPDSV++ FK+ GF+N  I+ ++ +F     L P     P   FF                +PK+    
Subjt:  SFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTKPFCPNSSFF----------------TPKV----

Query:  ----------------------------------LRLPNSRTSSSYFCMSLG----------------------RFWESLDDMLKMGFDPSKLRFVVAVY
                                          L++ +  +     C  LG                      RF E L+ +   GFDP K  FV A+ 
Subjt:  ----------------------------------LRLPNSRTSSSYFCMSLG----------------------RFWESLDDMLKMGFDPSKLRFVVAVY

Query:  CKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGMEFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKK-FM
             S+S   RK  +++ +G S+E  +A     P C+ +S+EKI   +E+ VN +G +A  ++ RP +LSLS++  I PR  V+  L   GL++K+   
Subjt:  CKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGMEFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKK-FM

Query:  LLSPYRCTESRFLGKYFHPHLKKVPQLSKLYHAN
          +  +   S F+ K+   +  ++PQL + + +N
Subjt:  LLSPYRCTESRFLGKYFHPHLKKVPQLSKLYHAN

AT1G61970.1 Mitochondrial transcription termination factor family protein1.2e-1923.25Show/hide
Query:  NFAISKPPLPSISLFNTTATA---------DSNSFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTK
        NF++S       S F ++A+A           N+FTV+YL++S       A SIS+ V+F     PDSV++   + GF+ + IS I+ ++         K
Subjt:  NFAISKPPLPSISLFNTTATA---------DSNSFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTK

Query:  PFCPNSSFF----------------TPKVLRLPNSRTSSSYF-----------------CMSL-------------------------------------
           P   F                  P++L     +T S Y+                 C SL                                     
Subjt:  PFCPNSSFF----------------TPKVLRLPNSRTSSSYF-----------------CMSL-------------------------------------

Query:  --GRFWESLDDMLKMGFDPSKLRFVVAVYCKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGM----------------------
           +F E+L  +++MGFDP+  +FV A+     +++ T   K+ +YKS G     + + F+  P  L++SE+K+   +                      
Subjt:  --GRFWESLDDMLKMGFDPSKLRFVVAVYCKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGM----------------------

Query:  -------------EFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFMLLS-PYRCTESRFLGKYFHPHLKK--VPQLSKLYHAN
                     EF V K+ W   AV+  P +   SL+  I+PR +V+  L   GL+R +   +S    CT+  FL +Y   H+ K  V +L  +Y A+
Subjt:  -------------EFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFMLLS-PYRCTESRFLGKYFHPHLKK--VPQLSKLYHAN

AT1G61970.2 Mitochondrial transcription termination factor family protein1.2e-1923.25Show/hide
Query:  NFAISKPPLPSISLFNTTATA---------DSNSFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTK
        NF++S       S F ++A+A           N+FTV+YL++S       A SIS+ V+F     PDSV++   + GF+ + IS I+ ++         K
Subjt:  NFAISKPPLPSISLFNTTATA---------DSNSFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTK

Query:  PFCPNSSFF----------------TPKVLRLPNSRTSSSYF-----------------CMSL-------------------------------------
           P   F                  P++L     +T S Y+                 C SL                                     
Subjt:  PFCPNSSFF----------------TPKVLRLPNSRTSSSYF-----------------CMSL-------------------------------------

Query:  --GRFWESLDDMLKMGFDPSKLRFVVAVYCKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGM----------------------
           +F E+L  +++MGFDP+  +FV A+     +++ T   K+ +YKS G     + + F+  P  L++SE+K+   +                      
Subjt:  --GRFWESLDDMLKMGFDPSKLRFVVAVYCKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGM----------------------

Query:  -------------EFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFMLLS-PYRCTESRFLGKYFHPHLKK--VPQLSKLYHAN
                     EF V K+ W   AV+  P +   SL+  I+PR +V+  L   GL+R +   +S    CT+  FL +Y   H+ K  V +L  +Y A+
Subjt:  -------------EFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFMLLS-PYRCTESRFLGKYFHPHLKK--VPQLSKLYHAN

AT2G39100.1 RING/U-box superfamily protein7.2e-6546.71Show/hide
Query:  SSTREPARKLNGENFITKVISPAICGETCPICLREL-EDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSD
        SS+R      +   F  + I PA+ G++CPICL  L E R+AAV+T C H YC+ CIRKWS+ KR CPLCN +FDSWF   + +S+ + KE+L      +
Subjt:  SSTREPARKLNGENFITKVISPAICGETCPICLREL-EDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSD

Query:  KLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKP
         L     ++ +D R I+Q +R  L       R L WRRSFGR  P S+P  V+ +RK QWRASIY + +RAV    R  LEL++  +   K  I ERI+P
Subjt:  KLKVGVGSSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKP

Query:  WIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAE-----DDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV
        WI+RELQ +L DPDP++IVH   +LF+ RLE  +++   +     +D +S LR FL +K D+FWHELRCFA S L ME YD+VVEY  V
Subjt:  WIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQLNAE-----DDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV

AT5G07900.1 Mitochondrial transcription termination factor family protein3.0e-2628.1Show/hide
Query:  SFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTKPFCPNSSFF----------------TPKVL--R
        SFT+ YLI+SC  +P SA   S+ +   SPE+P++V++  ++ GF+ A IS +V                P  SFF                 P +L   
Subjt:  SFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTKPFCPNSSFF----------------TPKVL--R

Query:  LPNSRTSSSYFCMSL------------GRFWESLDDMLK----------------------------------------------MGFDPSKLRFVVAVY
        L N    S  F  S+               W  L+D  K                                              MGF+P K  FV+A++
Subjt:  LPNSRTSSSYFCMSL------------GRFWESLDDMLK----------------------------------------------MGFDPSKLRFVVAVY

Query:  CKRSL-SKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGMEFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFM
              +KS W +   VY+ WG SE+ I+  F+ HP C+ +SE KI   ME+FVN++     ++ + P +L  SL+  IIPR SV   L  NGL+++ + 
Subjt:  CKRSL-SKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGMEFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNGLIRKKFM

Query:  LLSPYRCTESRFLGKYFHPHLKKVPQLSKLY
        L S     E  FL K    + +++P+L  LY
Subjt:  LLSPYRCTESRFLGKYFHPHLKKVPQLSKLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTCGAGTTCGACCCGAGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACAAAGGTAATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCT
CAGAGAATTGGAGGATCGTACCGCCGCCGTGCTTACAACGTGTATCCATGCTTATTGCATATGCTGTATTCGCAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTA
ACGCTCAATTCGATTCATGGTTTACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGGCAACCTCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGA
TCTTCCCAGACAGACGCTCGCGGGATTCTTCAGAGCACGAGGTATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGG
GCCGGATTCTTTGCCTGCTGATGTTGTTGTCCGGCGAAAACGTCAGTGGCGAGCTAGCATATACAACCGATGTATACGAGCTGTTCCATCTTCGGTCAGATCATGTTTAG
AACTGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGTTACAGGTCATCCTCGAGGACCCTGATCCAACTATA
ATTGTTCATCTGGTTATCTCACTATTTGTGGCGAGACTTGAAGCTACTTCCTCACAGCTTAATGCGGAAGATGATTTTCTTTCACCTTTGCGTCCCTTCCTCTTTGAAAA
GACTGATTTATTTTGGCATGAGCTAAGATGTTTTGCAGGAAGTCCATTGCGGATGGAAGAGTATGACTCAGTGGTTGAATATAGAACAGTGGTGTTGCCTGTTGGCATCA
ATGTCTATTTTCCTTTGCAAAACTCTAACTCGCGTTCCACATCTCCTCCAAATTTCGCCATATCCAAACCTCCGCTGCCTTCAATTTCTCTATTTAATACCACAGCCACT
GCCGATTCAAATTCCTTTACGGTTACGTATCTCATAAACTCATGTTCCTTCGCCCCTGCCTCTGCTTTATCTATTTCAAAGCACGTTACCTTCCATTCTCCTGAAAAACC
AGATTCCGTCATCTCCTTCTTCAAGAATCAAGGTTTTTCCAATGCTGATATCTCCTTCATTGTTGGGAACTTCCTCGGCTTCTGCTATCTGATCCCAACAAAACCCTTTT
GCCCAAATTCGAGTTTCTTTACTCCAAAGGTGCTTCGACTTCCAAATTCGAGGACGTCTTCTTCCTACTTTTGCATGAGTCTAGGCAGGTTTTGGGAGTCTCTGGATGAT
ATGCTGAAAATGGGGTTTGATCCATCGAAACTAAGATTTGTTGTAGCTGTTTATTGTAAACGATCATTGAGCAAATCGACATGGTTACGGAAGCTTGGAGTCTATAAGAG
TTGGGGTTTGTCTGAAGAACAAATTCTTGCTGGATTTAGGTGTCATCCATGGTGTCTGAAAATATCAGAGGAAAAAATTACTTCGGGAATGGAGTTCTTTGTTAATAAAT
TAGGCTGGGAAGCTACAGCTGTTATCAAAAGGCCTGATATGCTTTCACTTAGTTTAAAAAATACAATAATTCCAAGAGCTTCAGTTCTGCTGTGTCTGTTTCAGAATGGT
TTGATTAGGAAAAAATTCATGTTGTTAAGCCCATATAGGTGTACTGAAAGTAGGTTCTTGGGGAAGTATTTTCATCCTCATCTGAAAAAGGTACCTCAGCTATCAAAATT
GTATCATGCAAATGTGCATGATGGGATTTTGAAGCATTCCCTTTATGTGGTTTCCGATGACCTCTCTTTAGTAGAGAAGCGATGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTTCGAGTTCGACCCGAGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACAAAGGTAATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCT
CAGAGAATTGGAGGATCGTACCGCCGCCGTGCTTACAACGTGTATCCATGCTTATTGCATATGCTGTATTCGCAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTA
ACGCTCAATTCGATTCATGGTTTACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGGCAACCTCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGA
TCTTCCCAGACAGACGCTCGCGGGATTCTTCAGAGCACGAGGTATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGG
GCCGGATTCTTTGCCTGCTGATGTTGTTGTCCGGCGAAAACGTCAGTGGCGAGCTAGCATATACAACCGATGTATACGAGCTGTTCCATCTTCGGTCAGATCATGTTTAG
AACTGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGTTACAGGTCATCCTCGAGGACCCTGATCCAACTATA
ATTGTTCATCTGGTTATCTCACTATTTGTGGCGAGACTTGAAGCTACTTCCTCACAGCTTAATGCGGAAGATGATTTTCTTTCACCTTTGCGTCCCTTCCTCTTTGAAAA
GACTGATTTATTTTGGCATGAGCTAAGATGTTTTGCAGGAAGTCCATTGCGGATGGAAGAGTATGACTCAGTGGTTGAATATAGAACAGTGGTGTTGCCTGTTGGCATCA
ATGTCTATTTTCCTTTGCAAAACTCTAACTCGCGTTCCACATCTCCTCCAAATTTCGCCATATCCAAACCTCCGCTGCCTTCAATTTCTCTATTTAATACCACAGCCACT
GCCGATTCAAATTCCTTTACGGTTACGTATCTCATAAACTCATGTTCCTTCGCCCCTGCCTCTGCTTTATCTATTTCAAAGCACGTTACCTTCCATTCTCCTGAAAAACC
AGATTCCGTCATCTCCTTCTTCAAGAATCAAGGTTTTTCCAATGCTGATATCTCCTTCATTGTTGGGAACTTCCTCGGCTTCTGCTATCTGATCCCAACAAAACCCTTTT
GCCCAAATTCGAGTTTCTTTACTCCAAAGGTGCTTCGACTTCCAAATTCGAGGACGTCTTCTTCCTACTTTTGCATGAGTCTAGGCAGGTTTTGGGAGTCTCTGGATGAT
ATGCTGAAAATGGGGTTTGATCCATCGAAACTAAGATTTGTTGTAGCTGTTTATTGTAAACGATCATTGAGCAAATCGACATGGTTACGGAAGCTTGGAGTCTATAAGAG
TTGGGGTTTGTCTGAAGAACAAATTCTTGCTGGATTTAGGTGTCATCCATGGTGTCTGAAAATATCAGAGGAAAAAATTACTTCGGGAATGGAGTTCTTTGTTAATAAAT
TAGGCTGGGAAGCTACAGCTGTTATCAAAAGGCCTGATATGCTTTCACTTAGTTTAAAAAATACAATAATTCCAAGAGCTTCAGTTCTGCTGTGTCTGTTTCAGAATGGT
TTGATTAGGAAAAAATTCATGTTGTTAAGCCCATATAGGTGTACTGAAAGTAGGTTCTTGGGGAAGTATTTTCATCCTCATCTGAAAAAGGTACCTCAGCTATCAAAATT
GTATCATGCAAATGTGCATGATGGGATTTTGAAGCATTCCCTTTATGTGGTTTCCGATGACCTCTCTTTAGTAGAGAAGCGATGGAAGTAG
Protein sequenceShow/hide protein sequence
MNSSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCICCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLATSNCSDKLKVGVG
SSQTDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIRAVPSSVRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTI
IVHLVISLFVARLEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVVLPVGINVYFPLQNSNSRSTSPPNFAISKPPLPSISLFNTTAT
ADSNSFTVTYLINSCSFAPASALSISKHVTFHSPEKPDSVISFFKNQGFSNADISFIVGNFLGFCYLIPTKPFCPNSSFFTPKVLRLPNSRTSSSYFCMSLGRFWESLDD
MLKMGFDPSKLRFVVAVYCKRSLSKSTWLRKLGVYKSWGLSEEQILAGFRCHPWCLKISEEKITSGMEFFVNKLGWEATAVIKRPDMLSLSLKNTIIPRASVLLCLFQNG
LIRKKFMLLSPYRCTESRFLGKYFHPHLKKVPQLSKLYHANVHDGILKHSLYVVSDDLSLVEKRWK