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Chy11G201100 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G201100
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH11:21885556..21894363
RNA-Seq ExpressionChy11G201100
SyntenyChy11G201100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]1.07e-2368.35Show/hide
Query:  RGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWR
        RGDLAKIGREGF +IDEYFGRA +T  R  A   ARPALPQ P KAEQPPR ++EK   AV  +QVAK   GIVITTWR
Subjt:  RGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWR
KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]2.24e-1963.29Show/hide
Query:  RGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWR
        R DLAKIGREGF++IDEYFGR  +T  RR A   ARPALPQ P KAEQPPR  +EK    V  +QVA+   G+VITTWR
Subjt:  RGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWR
KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]1.14e-5396.84Show/hide
Query:  REREIIDTDANLARIGIEGFKLIDKFFGRAST-GGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKHGAVVTSDHLAKTRGGIVITTWRSYAKRK
        REREIIDTDANLARIGIEGFKLIDKFFGRAST GGRRVVAATEMRPAQMQPPRKVAEQPP KTKEK GAVVTSDHLAKTRGGIVITTWRSYAKRK
Subjt:  REREIIDTDANLARIGIEGFKLIDKFFGRAST-GGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKHGAVVTSDHLAKTRGGIVITTWRSYAKRK
KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]4.45e-5597.83Show/hide
Query:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWRP
        MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHG G VITTWRP
Subjt:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWRP
XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]3.42e-1161.54Show/hide
Query:  RGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQ
        R DLAKIGREGF++IDEYFGR  +T  R  AA   RPALPQ P KAEQPPR  +EK    V  +Q
Subjt:  RGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQ
TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein3.8e-4197.83Show/hide
Query:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWRP
        MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHG G VITTWRP
Subjt:  MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWRP
A0A0A0KI19 Uncharacterized protein2.2e-4196.84Show/hide
Query:  REREIIDTDANLARIGIEGFKLIDKFFGRAS-TGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKHGAVVTSDHLAKTRGGIVITTWRSYAKRK
        REREIIDTDANLARIGIEGFKLIDKFFGRAS TGGRRVVAATEMRPAQMQPPRKVAEQPP KTKEK GAVVTSDHLAKTRGGIVITTWRSYAKRK
Subjt:  REREIIDTDANLARIGIEGFKLIDKFFGRAS-TGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKHGAVVTSDHLAKTRGGIVITTWRSYAKRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTCTTAGAGAAAGAGAAATTAGGGGTTCTCGTGGTGACCTGGCGAAGATTGGGAGAGAGGGGTTCCAAATAATTGATGAATACTTTGGTCGAGCGTCATCGAC
AGGGGCGAGACGGGTGGCGGCGAAGACGGCAAGGCCAGCTTTGCCGCAACCACCACGTAAGGCAGAGCAGCCTCCAAGGATAAGGAAGGAAAAACCCGTGGCCGCTGTGA
CCTCCGATCAAGTGGCTAAACATGGCAGCGGAATCGTGATAACAACTTGGCGTCCGAGAGAGAGAGAAATTATAGATACTGATGCTAACCTGGCGAGGATTGGGATTGAA
GGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGACGGGCGGTAGAAGGGTAGTGGCGGCAACGGAGATGAGGCCAGCTCAGATGCAGCCACCGCGTAAGGTGGC
CGAGCAACCACCTTTGAAGACGAAAGAGAAACATGGGGCAGTGGTGACTTCCGATCATTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCGTATGCAA
AACGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTCTTAGAGAAAGAGAAATTAGGGGTTCTCGTGGTGACCTGGCGAAGATTGGGAGAGAGGGGTTCCAAATAATTGATGAATACTTTGGTCGAGCGTCATCGAC
AGGGGCGAGACGGGTGGCGGCGAAGACGGCAAGGCCAGCTTTGCCGCAACCACCACGTAAGGCAGAGCAGCCTCCAAGGATAAGGAAGGAAAAACCCGTGGCCGCTGTGA
CCTCCGATCAAGTGGCTAAACATGGCAGCGGAATCGTGATAACAACTTGGCGTCCGAGAGAGAGAGAAATTATAGATACTGATGCTAACCTGGCGAGGATTGGGATTGAA
GGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGACGGGCGGTAGAAGGGTAGTGGCGGCAACGGAGATGAGGCCAGCTCAGATGCAGCCACCGCGTAAGGTGGC
CGAGCAACCACCTTTGAAGACGAAAGAGAAACATGGGGCAGTGGTGACTTCCGATCATTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCGTATGCAA
AACGGAAATAG
Protein sequenceShow/hide protein sequence
MGFLREREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRIRKEKPVAAVTSDQVAKHGSGIVITTWRPREREIIDTDANLARIGIE
GFKLIDKFFGRASTGGRRVVAATEMRPAQMQPPRKVAEQPPLKTKEKHGAVVTSDHLAKTRGGIVITTWRSYAKRK