; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G201280 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G201280
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGATA transcription factor, putative
Genome locationchrH11:22026677..22027301
RNA-Seq ExpressionChy11G201280
SyntenyChy11G201280
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150081.1 GATA transcription factor 16 [Cucumis sativus]4.64e-9199.28Show/hide
Query:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MMDPIEE SEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
Subjt:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

XP_008458384.1 PREDICTED: GATA transcription factor 16-like isoform X1 [Cucumis melo]3.81e-9098.56Show/hide
Query:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MMDPIEE SEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
Subjt:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        LKWRSMAFGRKELMQR QLGEEEQAAVLLMALSYGSVYA
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

XP_008458385.1 PREDICTED: GATA transcription factor 16-like isoform X2 [Cucumis melo]3.75e-7799.17Show/hide
Query:  MESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQRRQL
        MESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQR QL
Subjt:  MESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQRRQL

Query:  GEEEQAAVLLMALSYGSVYA
        GEEEQAAVLLMALSYGSVYA
Subjt:  GEEEQAAVLLMALSYGSVYA

XP_022138518.1 GATA transcription factor 16-like [Momordica charantia]4.69e-7888.11Show/hide
Query:  MMDPIEEVSEFKDAG----KTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKI
        MMDPIEE SEFKDAG    K SP ESEQN+KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRG EVERKNKGSSN R +NGGGNQ KI
Subjt:  MMDPIEEVSEFKDAG----KTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKI

Query:  GGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        GG++LKWR MAFGR+ELMQRRQLGEEEQAAVLLMALSYGSVYA
Subjt:  GGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

XP_038875288.1 GATA transcription factor 16-like [Benincasa hispida]3.14e-8293.53Show/hide
Query:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MMDPIEE SEFKDAGK+SP ESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERK+KGSSN R+NNGGGNQ KIG ES
Subjt:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        LKWRSMAFGR ELMQRRQLGEEEQAAVLLMALSYGSVYA
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

TrEMBL top hitse value%identityAlignment
A0A0A0KG76 GATA-type domain-containing protein2.1e-6899.28Show/hide
Query:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MMDPIEE SEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
Subjt:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

A0A1S3C8C2 GATA transcription factor 16-like isoform X11.0e-6798.56Show/hide
Query:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MMDPIEE SEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
Subjt:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        LKWRSMAFGRKELMQR QLGEEEQAAVLLMALSYGSVYA
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

A0A1S3C902 GATA transcription factor 16-like isoform X29.8e-5899.17Show/hide
Query:  MESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQRRQL
        MESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQR QL
Subjt:  MESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKELMQRRQL

Query:  GEEEQAAVLLMALSYGSVYA
        GEEEQAAVLLMALSYGSVYA
Subjt:  GEEEQAAVLLMALSYGSVYA

A0A5D3BXI1 GATA transcription factor 16-like isoform X11.0e-6798.56Show/hide
Query:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MMDPIEE SEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
Subjt:  MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        LKWRSMAFGRKELMQR QLGEEEQAAVLLMALSYGSVYA
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

A0A6J1CD73 GATA transcription factor 16-like1.5e-5888.11Show/hide
Query:  MMDPIEEVSEFKDAG----KTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKI
        MMDPIEE SEFKDAG    K SP ESEQN+KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRG EVERKNKGSS NR +NGGGNQ KI
Subjt:  MMDPIEEVSEFKDAG----KTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKI

Query:  GGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
        GG++LKWR MAFGR+ELMQRRQLGEEEQAAVLLMALSYGSVYA
Subjt:  GGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

SwissProt top hitse value%identityAlignment
Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 13.5e-1267.39Show/hide
Query:  KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGG
        + C+DC TTKTPLWR GP GPKSLCNACGIR RK RR++     GG
Subjt:  KTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGG

Q8LC59 GATA transcription factor 231.1e-1340.29Show/hide
Query:  MDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MDP + +S           E +   + C++C TTKTP+WRGGP GPKSLCNACGIR RK+RRS LLG++    + R +K  ++ + N    + G +    
Subjt:  MDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
                    + +RR L EEEQAA+ L+ LS  SV A
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

Q8LG10 GATA transcription factor 151.0e-2451.23Show/hide
Query:  MMDPIEEV--SEFKDAGKTSPMESEQN------------KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRN
        M+DP E+V  SE  ++  TS    E++            KK+CA CGT+KTPLWRGGPAGPKSLCNACGIR+RKKRR+L+  NR  + ++K    S+NRN
Subjt:  MMDPIEEV--SEFKDAGKTSPMESEQN------------KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRN

Query:  NNGGGNQGKIGGESLKWRSMAFGRKELMQ--------RRQLGEEEQAAVLLMALSY-GSVYA
                   G+SLK R M  GR+ +MQ        R +LGEEEQAAVLLMALSY  SVYA
Subjt:  NNGGGNQGKIGGESLKWRSMAFGRKELMQ--------RRQLGEEEQAAVLLMALSY-GSVYA

Q9FJ10 GATA transcription factor 165.6e-2663.56Show/hide
Query:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKEL----MQRRQLGE
        KKTCADCGT+KTPLWRGGP GPKSLCNACGIR+RKKRR       G E  +K K SS     +GGGN  +  GESLK   M  G ++      QR++LGE
Subjt:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKEL----MQRRQLGE

Query:  EEQAAVLLMALSYGSVYA
        EEQAAVLLMALSYGSVYA
Subjt:  EEQAAVLLMALSYGSVYA

Q9LIB5 GATA transcription factor 172.5e-1840.36Show/hide
Query:  AGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS--------------------------------
        +G      S   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKKR++ LG+    E ++KN+ S                                
Subjt:  AGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS--------------------------------

Query:  ---SNNRNNNGGGNQG-----KIGGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
           +N R+++   N+G      +G +    +  A  +K L   R+LGEEE+AAVLLMALS  SVYA
Subjt:  ---SNNRNNNGGGNQG-----KIGGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 157.4e-2651.23Show/hide
Query:  MMDPIEEV--SEFKDAGKTSPMESEQN------------KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRN
        M+DP E+V  SE  ++  TS    E++            KK+CA CGT+KTPLWRGGPAGPKSLCNACGIR+RKKRR+L+  NR  + ++K    S+NRN
Subjt:  MMDPIEEV--SEFKDAGKTSPMESEQN------------KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRN

Query:  NNGGGNQGKIGGESLKWRSMAFGRKELMQ--------RRQLGEEEQAAVLLMALSY-GSVYA
                   G+SLK R M  GR+ +MQ        R +LGEEEQAAVLLMALSY  SVYA
Subjt:  NNGGGNQGKIGGESLKWRSMAFGRKELMQ--------RRQLGEEEQAAVLLMALSY-GSVYA

AT3G16870.1 GATA transcription factor 171.8e-1940.36Show/hide
Query:  AGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS--------------------------------
        +G      S   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKKR++ LG+    E ++KN+ S                                
Subjt:  AGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGS--------------------------------

Query:  ---SNNRNNNGGGNQG-----KIGGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
           +N R+++   N+G      +G +    +  A  +K L   R+LGEEE+AAVLLMALS  SVYA
Subjt:  ---SNNRNNNGGGNQG-----KIGGESLKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

AT4G16141.1 GATA type zinc finger transcription factor family protein7.0e-1637.78Show/hide
Query:  SEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSN----NRNNNGG--------------
        S+  +   +S       KKTC DCGT++TPLWRGGPAGPKSLCNACGI+SRKKR++ LG+ R  +++ K+K ++N    +RN   G              
Subjt:  SEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSN----NRNNNGG--------------

Query:  -------GNQGKIGGESLK------------------WRSMAFGRK-ELMQR---------RQLGEEEQAAVLLMALSYG
               G  G +  +  +                   R + FG K   M+R         R+LGEEE+AAVLLMALS G
Subjt:  -------GNQGKIGGESLK------------------WRSMAFGRK-ELMQR---------RQLGEEEQAAVLLMALSYG

AT5G26930.1 GATA transcription factor 237.7e-1540.29Show/hide
Query:  MDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES
        MDP + +S           E +   + C++C TTKTP+WRGGP GPKSLCNACGIR RK+RRS LLG++    + R +K  ++ + N    + G +    
Subjt:  MDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRS-LLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGES

Query:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA
                    + +RR L EEEQAA+ L+ LS  SV A
Subjt:  LKWRSMAFGRKELMQRRQLGEEEQAAVLLMALSYGSVYA

AT5G49300.1 GATA transcription factor 164.0e-2763.56Show/hide
Query:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKEL----MQRRQLGE
        KKTCADCGT+KTPLWRGGP GPKSLCNACGIR+RKKRR       G E  +K K SS     +GGGN  +  GESLK   M  G ++      QR++LGE
Subjt:  KKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGRKEL----MQRRQLGE

Query:  EEQAAVLLMALSYGSVYA
        EEQAAVLLMALSYGSVYA
Subjt:  EEQAAVLLMALSYGSVYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATCCGATTGAGGAAGTATCGGAGTTCAAGGATGCTGGAAAGACATCACCGATGGAGAGTGAGCAGAATAAGAAGACCTGCGCTGATTGTGGAACGACGAAGAC
TCCTCTCTGGCGTGGAGGTCCGGCTGGCCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGATCGCTACTAGGTTTAAACAGAGGAGGGGAAG
TAGAGAGGAAAAACAAGGGTAGTAGTAACAACAGAAACAACAATGGCGGTGGAAATCAAGGAAAAATTGGGGGAGAAAGCTTGAAATGGAGATCGATGGCGTTTGGTAGA
AAAGAATTAATGCAAAGGAGACAGTTGGGAGAGGAAGAGCAAGCTGCTGTTTTGTTAATGGCTCTTTCTTATGGATCTGTATATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGATCCGATTGAGGAAGTATCGGAGTTCAAGGATGCTGGAAAGACATCACCGATGGAGAGTGAGCAGAATAAGAAGACCTGCGCTGATTGTGGAACGACGAAGAC
TCCTCTCTGGCGTGGAGGTCCGGCTGGCCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGATCGCTACTAGGTTTAAACAGAGGAGGGGAAG
TAGAGAGGAAAAACAAGGGTAGTAGTAACAACAGAAACAACAATGGCGGTGGAAATCAAGGAAAAATTGGGGGAGAAAGCTTGAAATGGAGATCGATGGCGTTTGGTAGA
AAAGAATTAATGCAAAGGAGACAGTTGGGAGAGGAAGAGCAAGCTGCTGTTTTGTTAATGGCTCTTTCTTATGGATCTGTATATGCTTGA
Protein sequenceShow/hide protein sequence
MMDPIEEVSEFKDAGKTSPMESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKNKGSSNNRNNNGGGNQGKIGGESLKWRSMAFGR
KELMQRRQLGEEEQAAVLLMALSYGSVYA