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Chy11G201400 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G201400
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description60S ribosomal protein L29
Genome locationchrH11:22140679..22140956
RNA-Seq ExpressionChy11G201400
SyntenyChy11G201400
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47471.2 hypothetical protein Csa_023012 [Cucumis sativus]4.93e-3298.36Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_008458370.1 PREDICTED: 60S ribosomal protein L29-1 [Cucumis melo]8.94e-35100Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_008458371.1 PREDICTED: 60S ribosomal protein L29-1-like [Cucumis melo]5.18e-3498.36Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_010534701.1 PREDICTED: 60S ribosomal protein L29-1 [Tarenaya hassleriana]1.74e-3293.44Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN+KSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_011657268.1 60S ribosomal protein L29-1 [Cucumis sativus]5.18e-3498.36Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

TrEMBL top hitse value%identityAlignment
A0A0A0KCX6 60S ribosomal protein L292.4e-2498.36Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A1S3C7P2 60S ribosomal protein L292.4e-2498.36Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A1S3C7U0 60S ribosomal protein L296.3e-25100Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A2R6PJK9 60S ribosomal protein L293.8e-2291.8Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE+A+ EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

V9HZW1 60S ribosomal protein L291.3e-2293.44Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE  SGEE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L293.7e-1475Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK

Q58DW3 60S ribosomal protein L293.7e-1475Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK

Q84WM0 60S ribosomal protein L29-29.7e-2386.89Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

Q8HXB8 60S ribosomal protein L293.7e-1475Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK

Q9M7X7 60S ribosomal protein L29-13.3e-2386.89Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family6.9e-2486.89Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06680.2 Ribosomal L29e protein family6.9e-2486.89Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.1 Ribosomal L29e protein family2.4e-2486.89Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.2 Ribosomal L29e protein family2.4e-2486.89Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.3 Ribosomal L29e protein family2.4e-2486.89Show/hide
Query:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCTACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCTACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTAA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE