; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G201630 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G201630
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH11:22393662..22405387
RNA-Seq ExpressionChy11G201630
SyntenyChy11G201630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575134.1 Flowering time control protein FCA, partial [Cucurbita argyrosperma subsp. sororia]5.15e-1739.78Show/hide
Query:  PQKKLIEQLGTCTINIPFLGEWARFKLDMLMVSESALVQLSTNCLLVH*INKLQKKKSRKSFLPME*LKMFISCGMK*NRVVGVDL*SIHIGTWHWRL*M
        PQKKLIEQLGTCTINIPFLGE A+FK DMLM S S  VQLS+NC     +  L K+ S K         + +          G    +   G   +    
Subjt:  PQKKLIEQLGTCTINIPFLGEWARFKLDMLMVSESALVQLSTNCLLVH*INKLQKKKSRKSFLPME*LKMFISCGMK*NRVVGVDL*SIHIGTWHWRL*M

Query:  LLMEFLQ*EVVINR*VSALLTQRSPDLEIQ---GALLRLEVQALALAFNHLGQDQHLILVNLWVIEFQLMYEVSGHPLMLVFIPLG
                         +      P        G +  + +  L + F  L  DQ LILVNLWVIEFQ MYEVSGH LMLV  P G
Subjt:  LLMEFLQ*EVVINR*VSALLTQRSPDLEIQ---GALLRLEVQALALAFNHLGQDQHLILVNLWVIEFQLMYEVSGHPLMLVFIPLG
KAG7026361.1 hypothetical protein SDJN02_12863 [Cucurbita argyrosperma subsp. argyrosperma]9.49e-0572.73Show/hide
Query:  IIPMEAILPSYLLDRFQGQPRKKLFVHCLKNME
        II  EA+LPS LLD FQGQ +KK+F HCLKNME
Subjt:  IIPMEAILPSYLLDRFQGQPRKKLFVHCLKNME
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCATTCCGATGGAAGCAATTTTGCCAAGCTATTTGTTGGATCGGTTCCAAGGACAGCCACGGAAGAAATTATTCGTCCATTGTTTGAAGAACATGGAAATGTGATTGAA
GTAGCTTTGATAAAGGATAAGAGAACAGGCCAACAACAAGGATGTTGTTTTGTAAAATATACTACCTCAGAAGAAGCTGATAGAGCAATTAGGAACCTGCACAATCAACA
TACCCTTCCTGGGGGAGTGGGCCCGATTCAAGTTAGATATGCTGATGGTGAGCGAGAGCGCCTTGGTGCAGTTGAGTACAAATTGTTTGTTGGTTCACTAAATAAACAAG
CTTCAGAAAAAGAAGTCAAGGAAATCTTTTCTCCCTATGGAGTAGTTGAAGATGTTTATCTCATGCGGGATGAAATGAAACAGAGTCGTGGGTGTGGATTTGTGAAGTAT
TCACATAGGGACATGGCACTGGCGGCTATAAATGCTCTTAATGGAATTTTTACAATGAGAGGTTGTGATCAACCGTTAAGTGTCCGCTTTGCTGACCCAAAGAAGCCCAG
ACCTGGAGATTCAAGGGGCACTCCTGCGTTTGGAGGTCCAGGCTTTGGCTCTCGCTTTCAACCACCTGGGCCAAGACCAACACCTAATTTTGGTGAATTTATGGGTGATC
GAATTCCAATTGATGTACGAGGTTTCAGGCCACCCATTGATGCTGGTATTCATCCCTTTGGGGGTCAGTTGCCACCTAGGTCCAGTGAAATGGGACTACCTTTGAATTTG
GGTGGTCCTGCTGGTGGGTTTAGAGGTCCCAATCAAGGGTTAGTCAATCCAGCATCTTCAGCTTCTCAACAGAATTTTAATCAGTCTGCAAGCCAACATCCACCGCCTGG
TCTGCAAGTGTCGCCAGTGTTAAAAACTTCTCAGTCGCCTAAACAATTGCCACCTTCGAATCAATTGCACTCTCACACCATTGCCTATTCTCAGACACAGACATCTCCAG
CATTAGCGCAACAGCATAATCAACCACAAAACTTCAATTCTTCTGGTCAACTGCCCTTTAGTCAGCCTGCACCCTCCCAGGAGTCACCTGGCTTAGGTGGGCAGTTGGCG
GTATCTCAGTCTATGGGTGCCTCATCTGCTGCAGCTACACATACTCCTTTGAGTATGAACTTACAATCCCATGCTGCTGCCCCGAGTCAACAGCAACTTCCTACGCCAAT
TCAACCACCTCAGAATTCACCTTCTCAGTTAGCACACATGCTTTCACAACAAAAACAAACTCTACAGGCTAGGTTCCAGTCTTCCCAGCAGGCATTCTCTCAGCTACAAC
AGCAGTTGCAGCTGATACAACCACCAAATCAAAGTTCAACTTTGCAACCGAGTTCCCAGACTATTAAGCAACAGGTATTGAGTAATAGCAAGAGGATATCTCTATACTAG
mRNA sequenceShow/hide mRNA sequence
ATCATTCCGATGGAAGCAATTTTGCCAAGCTATTTGTTGGATCGGTTCCAAGGACAGCCACGGAAGAAATTATTCGTCCATTGTTTGAAGAACATGGAAATGTGATTGAA
GTAGCTTTGATAAAGGATAAGAGAACAGGCCAACAACAAGGATGTTGTTTTGTAAAATATACTACCTCAGAAGAAGCTGATAGAGCAATTAGGAACCTGCACAATCAACA
TACCCTTCCTGGGGGAGTGGGCCCGATTCAAGTTAGATATGCTGATGGTGAGCGAGAGCGCCTTGGTGCAGTTGAGTACAAATTGTTTGTTGGTTCACTAAATAAACAAG
CTTCAGAAAAAGAAGTCAAGGAAATCTTTTCTCCCTATGGAGTAGTTGAAGATGTTTATCTCATGCGGGATGAAATGAAACAGAGTCGTGGGTGTGGATTTGTGAAGTAT
TCACATAGGGACATGGCACTGGCGGCTATAAATGCTCTTAATGGAATTTTTACAATGAGAGGTTGTGATCAACCGTTAAGTGTCCGCTTTGCTGACCCAAAGAAGCCCAG
ACCTGGAGATTCAAGGGGCACTCCTGCGTTTGGAGGTCCAGGCTTTGGCTCTCGCTTTCAACCACCTGGGCCAAGACCAACACCTAATTTTGGTGAATTTATGGGTGATC
GAATTCCAATTGATGTACGAGGTTTCAGGCCACCCATTGATGCTGGTATTCATCCCTTTGGGGGTCAGTTGCCACCTAGGTCCAGTGAAATGGGACTACCTTTGAATTTG
GGTGGTCCTGCTGGTGGGTTTAGAGGTCCCAATCAAGGGTTAGTCAATCCAGCATCTTCAGCTTCTCAACAGAATTTTAATCAGTCTGCAAGCCAACATCCACCGCCTGG
TCTGCAAGTGTCGCCAGTGTTAAAAACTTCTCAGTCGCCTAAACAATTGCCACCTTCGAATCAATTGCACTCTCACACCATTGCCTATTCTCAGACACAGACATCTCCAG
CATTAGCGCAACAGCATAATCAACCACAAAACTTCAATTCTTCTGGTCAACTGCCCTTTAGTCAGCCTGCACCCTCCCAGGAGTCACCTGGCTTAGGTGGGCAGTTGGCG
GTATCTCAGTCTATGGGTGCCTCATCTGCTGCAGCTACACATACTCCTTTGAGTATGAACTTACAATCCCATGCTGCTGCCCCGAGTCAACAGCAACTTCCTACGCCAAT
TCAACCACCTCAGAATTCACCTTCTCAGTTAGCACACATGCTTTCACAACAAAAACAAACTCTACAGGCTAGGTTCCAGTCTTCCCAGCAGGCATTCTCTCAGCTACAAC
AGCAGTTGCAGCTGATACAACCACCAAATCAAAGTTCAACTTTGCAACCGAGTTCCCAGACTATTAAGCAACAGGTATTGAGTAATAGCAAGAGGATATCTCTATACTAG
Protein sequenceShow/hide protein sequence
IIPMEAILPSYLLDRFQGQPRKKLFVHCLKNMEMLK*L**RIREQANNKDVVL*NILPQKKLIEQLGTCTINIPFLGEWARFKLDMLMVSESALVQLSTNCLLVHINKLQ
KKKSRKSFLPMELKMFISCGMK*NRVVGVDL*SIHIGTWHWRL*MLLMEFLQ*EVVINR*VSALLTQRSPDLEIQGALLRLEVQALALAFNHLGQDQHLILVNLWVIEFQ
LMYEVSGHPLMLVFIPLGVSCHLGPVKWDYLIWVVLLVGLEVPIKG*SIQHLQLLNRILISLQANIHRLVCKCRQCKLLSRLNNCHLRINCTLTPLPILRHRHLQH*RNS
IINHKTSILLVNCPLVSLHPPRSHLAVGSWRYLSLWVPHLLQLHILL*V*TYNPMLLPRVNSNFLRQFNHLRIHLLS*HTCFHNKNKLYRLGSSLPSRHSLSYNSSCSYN
HQIKVQLCNRVPRLLSNRY*VIARGYLYTX