; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G201960 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G201960
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptiontRNA pseudouridine synthase
Genome locationchrH11:22708097..22709616
RNA-Seq ExpressionChy11G201960
SyntenyChy11G201960
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138518.2 uncharacterized protein LOC101205797 [Cucumis sativus]5.59e-15799.55Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTSFGRTRSVSKCKVPFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

XP_008458279.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]6.92e-15396.38Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTS GR+RSV KCKVPFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

XP_008458280.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X2 [Cucumis melo]2.39e-15396.38Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTS GR+RSV KCKVPFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

XP_022959478.1 uncharacterized protein LOC111460439 isoform X2 [Cucurbita moschata]1.55e-14287.33Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSL+ +HAALNGLLP DIRVREMSPAVPDFHARFSTLSKVYHYKIY+  I+DPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAF N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
         AHNDRVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PP++VPKILA+RDR+ELAKY + +PPQGLCLV INYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTSFGR+ SVSKCK+PFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

XP_038875516.1 tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida]2.20e-14993.21Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSLESVHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIY+G I+DPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNDRVVNPVKVIFRFDVI+MG LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILAS+DRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTS GR RSVSKCK+PFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

TrEMBL top hitse value%identityAlignment
A0A0A0KB67 tRNA pseudouridine synthase5.9e-11699.52Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFG
        DCPGTSFG
Subjt:  DCPGTSFG

A0A1S3C7H4 tRNA pseudouridine synthase4.6e-12196.38Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTS GR+RSV KCKVPFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

A0A1S3C7L6 tRNA pseudouridine synthase4.6e-12196.38Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTS GR+RSV KCKVPFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

A0A5D3BY40 Protein TRIGALACTOSYLDIACYLGLYCEROL 41.6e-11397.12Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAFTN
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
        AAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCLVSINYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFG
        DCPGTS G
Subjt:  DCPGTSFG

A0A6J1H621 tRNA pseudouridine synthase3.6e-11387.33Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHF+TPFNYDSL+ +HAALNGLLP DIRVREMSPAVPDFHARFSTLSKVYHYKIY+  I+DPFQRCYTYHCVYKLN+AAMKEAANYFVGKHDFSAF N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS
         AHNDRVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PP++VPKILA+RDR+ELAKY + +PPQGLCLV INYKEDHLKLPS
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPS

Query:  DCPGTSFGRTRSVSKCKVPFY
        DCPGTSFGR+ SVSKCK+PFY
Subjt:  DCPGTSFGRTRSVSKCKVPFY

SwissProt top hitse value%identityAlignment
A4J151 tRNA pseudouridine synthase A3.6e-3041.24Show/hide
Query:  ESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVI
        E    ALN LLP DI+V +      DFHARFS ++K Y Y IY   +M PF R Y YH   +L+  AM+E A Y +G +DF +F   A    V + ++ I
Subjt:  ESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVI

Query:  FRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY
        +R D+IE   ++ L + G+GFLY  VR + G L+ IG   + PE + KI+ S++R      A   PPQGLCL+ + Y
Subjt:  FRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY

B1I1B5 tRNA pseudouridine synthase A1.0e-3241.45Show/hide
Query:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAF
        R QV +FVT       E + AALNG+LP DI   +      DFHAR+S ++K Y Y +Y+  +  PFQR Y+ H    L+  AM+ AA + +G+HDFS F
Subjt:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAF

Query:  TNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY
          A     V + V+ + R D+     LV+L     GFLY  VR M G L+++G E L PE +P I+AS DR   A+    VPP GLCL  + Y
Subjt:  TNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY

Q3A3B5 tRNA pseudouridine synthase A2.0e-2837.86Show/hide
Query:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAF
        R  VAHFVTP     + +    +N  LP  I VR+ +    DFHAR+S + K Y Y IY   +  P    +++H    L+  AM++AA   VG+HDF+AF
Subjt:  RFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAF

Query:  TNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGV--PPQGLCLVSINYKEDHL
          +    R    V+ +F  D+++    V ++V GSGFL   VR MVG LV++G+ A PPE V  +LA   R++     SG+  P QGLCL+ + Y     
Subjt:  TNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGV--PPQGLCLVSINYKEDHL

Query:  KLPSDC
          P DC
Subjt:  KLPSDC

Q6MEE7 tRNA pseudouridine synthase A 11.8e-3739.8Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHF    +Y  L  +H +LNGLLP DIR++ + P  P FH+++S + K YHY ++   +MDPFQR Y++H   K++   +K+AA  F G HDF++F N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDH
         AH      NPV+ ++R D+      ++LE EG GFLY+ VRN+VG L+ +       E + +I A+++RR+ +  A   PP+GL L+ + Y+ ++
Subjt:  AAHNDRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDH

Q8R7Y7 tRNA pseudouridine synthase A2.4e-2942.71Show/hide
Query:  FQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFT
        +QVA+F T       E +  ALN +LP D+ V +       FHAR+S  SK Y Y I +     P  R Y +H  Y L+  AMK+AA +F G HDFSAF 
Subjt:  FQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFT

Query:  NAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY
          A  ++ VNPVK IF   V + G L+++EVE  GFLY  VR +VG LV +G   +    +P I+ S+DR    K     PPQGL LV I Y
Subjt:  NAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein1.9e-1032.34Show/hide
Query:  LNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAF-----TNAAHNDRVVNPVKVIF
        LN  LP DIRV   SPA  DFHARFS  ++ Y Y  +                   LN +AM  A   F+G+HDF  F      N     R V   +V  
Subjt:  LNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAF-----TNAAHNDRVVNPVKVIF

Query:  RFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKY--ASGVP
          +  E   L    + GS FL+ Q+R MV +L  IG+     +V+  +L ++      +Y  AS +P
Subjt:  RFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKY--ASGVP

AT3G06950.1 Pseudouridine synthase family protein9.3e-9071.17Show/hide
Query:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN
        QVAHFVTPFNY SL+S HAALNGLLP DIRVRE+S AVP+FHARFS  SKVY Y+IY+ T MDPFQR + YHC YKLN + M+EAAN FVGKHDFSAF N
Subjt:  QVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFTN

Query:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYAS-GVPPQGLCLVSINYKEDHLKLP
        A   D V +P+K I RFDVI+MG+L+QLEVEGSGFLYRQVRNMV LL+QIGKEAL  ++VP IL ++DRR LAKY S    P GLCLVS+ YKEDHLKLP
Subjt:  AAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYAS-GVPPQGLCLVSINYKEDHLKLP

Query:  SDCPGTSFGRTRSVSKCKVPFY
         DCP TS GR  +++KCK+PFY
Subjt:  SDCPGTSFGRTRSVSKCKVPFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCTGTTGCTTACGACAAGTTGAGGTTTCAGGTGGCTCACTTTGTTACGCCATTTAACTACGATAGCTTGGAAAGCGTTCATGCTGCACTGAATGGCCTTCTTCC
TGTGGATATAAGAGTTCGAGAGATGAGTCCTGCTGTACCCGATTTTCATGCTCGGTTTTCTACGTTAAGCAAGGTTTATCACTACAAGATATATAGTGGCACAATCATGG
ATCCATTTCAGCGTTGCTACACTTACCACTGTGTTTATAAACTCAACCATGCAGCCATGAAAGAAGCTGCAAATTATTTTGTCGGAAAGCATGATTTTTCTGCTTTTACA
AATGCAGCTCATAATGATCGAGTGGTAAATCCAGTGAAGGTCATTTTCCGTTTTGATGTGATAGAAATGGGAGCTCTTGTGCAGTTAGAAGTTGAGGGTTCTGGGTTCTT
ATATAGACAAGTTCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCACTTCCTCCTGAGGTTGTTCCTAAGATTTTGGCATCTCGAGATCGCAGAGAGCTTG
CCAAGTATGCTTCGGGCGTTCCTCCCCAGGGACTGTGTCTTGTGAGTATTAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTTTTGGTAGG
ACTCGTAGTGTGAGCAAATGTAAAGTCCCTTTTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCTGTTGCTTACGACAAGTTGAGGTTTCAGGTGGCTCACTTTGTTACGCCATTTAACTACGATAGCTTGGAAAGCGTTCATGCTGCACTGAATGGCCTTCTTCC
TGTGGATATAAGAGTTCGAGAGATGAGTCCTGCTGTACCCGATTTTCATGCTCGGTTTTCTACGTTAAGCAAGGTTTATCACTACAAGATATATAGTGGCACAATCATGG
ATCCATTTCAGCGTTGCTACACTTACCACTGTGTTTATAAACTCAACCATGCAGCCATGAAAGAAGCTGCAAATTATTTTGTCGGAAAGCATGATTTTTCTGCTTTTACA
AATGCAGCTCATAATGATCGAGTGGTAAATCCAGTGAAGGTCATTTTCCGTTTTGATGTGATAGAAATGGGAGCTCTTGTGCAGTTAGAAGTTGAGGGTTCTGGGTTCTT
ATATAGACAAGTTCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCACTTCCTCCTGAGGTTGTTCCTAAGATTTTGGCATCTCGAGATCGCAGAGAGCTTG
CCAAGTATGCTTCGGGCGTTCCTCCCCAGGGACTGTGTCTTGTGAGTATTAATTATAAAGAGGACCATTTAAAGCTTCCATCTGATTGCCCTGGGACTAGTTTTGGTAGG
ACTCGTAGTGTGAGCAAATGTAAAGTCCCTTTTTATTGA
Protein sequenceShow/hide protein sequence
MLAVAYDKLRFQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNHAAMKEAANYFVGKHDFSAFT
NAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPGTSFGR
TRSVSKCKVPFY