; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy11G202010 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy11G202010
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchrH11:22760646..22766139
RNA-Seq ExpressionChy11G202010
SyntenyChy11G202010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.87e-10270.97Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLV+L+QFEPL+DATSLL Q++K+ADV+FT  ML +I S+ SPRFVATLQ+S RLFTN+SVDH  SSKVSLE FHDAMLDGGSFSSM+IH+L++  QM+
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        LR+E PS + PPLH EL LSPPQAE+LGQVEYG FFTV S+ LR+IIKELPLFH D V V  T ++VKFSI SKEI +TKE G+C+IVGYEGE ET+L +
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTYRANK
          RPMMFFLNFTY+AN+
Subjt:  VLRPMMFFLNFTYRANK

TYK02993.1 uncharacterized protein E5676_scaffold46G00820 [Cucumis melo var. makuwa]2.17e-9485.64Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAK+ADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGS                
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
               HDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]3.80e-14698.62Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAK+ADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGSFSSMTIHLLDTTNQMV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTYRANK
        VLRPMMFFLNFTYRANK
Subjt:  VLRPMMFFLNFTYRANK

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]4.81e-8966.37Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L+ F+PL+DATS LAQ++ + AD+KFTP    II S+RSPRF+ATLQLS + FT FSVD++ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYGN--FFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D++ SV VT S+VKFSI SKEIILT EG HCKI G+E EV
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYGN--FFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV

Query:  ETKLQVVLRPMMFFLNFTYRANK
        ET+ Q++L PMMFFLNFTY+AN+
Subjt:  ETKLQVVLRPMMFFLNFTYRANK

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]7.38e-8966.06Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLV+L  FEPL+DATS LAQ++  ADVKFTPL   +I    SPRFVATLQLS++ FTN+SVDH  +SKV LE FHDA+LDGGSF+SMTIHLL+  NQM+
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQ-AENL--GQVEYGNFFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVET
        LRF+TPS ++PPLHHEL  SPPQ A+N   GQ+E G FF V S  LRRIIKELP+F  D+V  V VT SQ+KFSI SKEI+L  +  HC+IVG+E EVET
Subjt:  LRFETPSHDVPPLHHELALSPPQ-AENL--GQVEYGNFFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVET

Query:  KLQVVLRPMMFFLNFTYRANK
        + Q++LRPM+FFLNFTY+ANK
Subjt:  KLQVVLRPMMFFLNFTYRANK

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980102.9e-11498.62Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAK+ADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGSFSSMTIHLLDTTNQMV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTYRANK
        VLRPMMFFLNFTYRANK
Subjt:  VLRPMMFFLNFTYRANK

A0A1S3CL88 uncharacterized protein LOC1035022505.1e-7166.37Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVA-KEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L+ F+PL+DATS LAQ++   AD+KFTP    II S+RSPRF+ATLQLS + FT FSVD++ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVA-KEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D+ +SV VT S+VKFSI SKEIILT EG HCKI G+E EV
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV

Query:  ETKLQVVLRPMMFFLNFTYRANK
        ET+ Q++L PMMFFLNFTY+AN+
Subjt:  ETKLQVVLRPMMFFLNFTYRANK

A0A5D3BTK3 Uncharacterized protein2.2e-7485.64Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAK+ADVKFTPLMLMIIVSNRSP+FVATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGG                 
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
              SHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein1.2e-6464.79Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVA-KEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L+ F+PL+DATS LAQ++   AD+KFTP    II S+RSPRF+ATLQLS + FT FSVD++ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVA-KEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D+ +SV VT S+VKFSI SKEIILT EG HCKI G+E EV
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV

Query:  ETKLQVVLRPMMF
        ET+ Q++L PM++
Subjt:  ETKLQVVLRPMMF

A0A6J1KIW5 uncharacterized protein LOC1114948744.1e-6055.4Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRL+ F PL+D TS LAQ+A+E+D+ FTPL L +  S  SPRF+ATLQ+  + FT +SV+ +  S++SLE  HDA+LD GS S+MTIHLL+ TN MV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        LRFETP+H+ P L H+  L PPQ +++ ++EY     + SR+LR++IKELPLFH D+V VTVT S+V+FSI S+E+I  KE G C+I+G++G+  T+ ++
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTY
        VL PM+FFLN TY
Subjt:  VLRPMMFFLNFTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTAGTAAGGCTTGAGCAATTTGAACCTCTCATTGATGCAACCTCCTTGTTGGCTCAAGTTGCTAAGGAAGCCGACGTGAAATTCACACCATTGATGCTCATGAT
AATCGTATCGAACCGTTCCCCTCGGTTCGTTGCAACGCTACAATTGTCGCGACGATTGTTCACCAACTTTTCTGTGGATCATAATAAAAGTTCCAAGGTTTCCCTTGAAC
CTTTCCACGATGCTATGTTGGATGGTGGGAGTTTTTCTTCAATGACTATCCATCTTTTGGATACAACAAACCAAATGGTTCTTAGATTTGAGACTCCAAGTCATGATGTG
CCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAGAGAGTTAAGAAGGATCAT
AAAAGAATTACCTCTCTTCCATCAAGATACTGTTAGTGTTACTGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATTCTTACCAAAGAGGGTGGAC
ATTGTAAAATCGTAGGTTATGAAGGAGAAGTTGAAACGAAACTCCAAGTAGTTCTTCGACCGATGATGTTTTTCCTAAATTTTACATATAGAGCCAATAAGCAGCTCAGT
GTCGTCGTCGTCGCCGCCGCCGCCTCTCTCCGGTTCAGTGCCGCCGTCGTCGTGTATTTCTTCCATTCGTGTCGCCACAGCCTCGTAGCCGGGTTTGCGCTGATTTTATA
CTCCCTTCTTACTGATACTATTAAGGTTGGTTTTATTGAAGATTCAGAATCATGGTCACTAGATTCTTCATGCATTGTTTGGGTGAAATCTTTATCAAGGAATGTGCTTC
TACATCTCCTATGCAAAGGGATCTATTTCAGGCCAATGTTCACGAGCGAGTTAATGCTTACAATACAGTTTTGGTTAGATACGTGGGTTGCTAGTGGTTCAACTTTTGAA
GATTGGGATGGTGTTTCATGCTCTTGGAATACGTTCTTTAGAAGCCTTCTTAAAGATGATGAGATTGTTGATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTAGTAAGGCTTGAGCAATTTGAACCTCTCATTGATGCAACCTCCTTGTTGGCTCAAGTTGCTAAGGAAGCCGACGTGAAATTCACACCATTGATGCTCATGAT
AATCGTATCGAACCGTTCCCCTCGGTTCGTTGCAACGCTACAATTGTCGCGACGATTGTTCACCAACTTTTCTGTGGATCATAATAAAAGTTCCAAGGTTTCCCTTGAAC
CTTTCCACGATGCTATGTTGGATGGTGGGAGTTTTTCTTCAATGACTATCCATCTTTTGGATACAACAAACCAAATGGTTCTTAGATTTGAGACTCCAAGTCATGATGTG
CCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAGAGAGTTAAGAAGGATCAT
AAAAGAATTACCTCTCTTCCATCAAGATACTGTTAGTGTTACTGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATTCTTACCAAAGAGGGTGGAC
ATTGTAAAATCGTAGGTTATGAAGGAGAAGTTGAAACGAAACTCCAAGTAGTTCTTCGACCGATGATGTTTTTCCTAAATTTTACATATAGAGCCAATAAGCAGCTCAGT
GTCGTCGTCGTCGCCGCCGCCGCCTCTCTCCGGTTCAGTGCCGCCGTCGTCGTGTATTTCTTCCATTCGTGTCGCCACAGCCTCGTAGCCGGGTTTGCGCTGATTTTATA
CTCCCTTCTTACTGATACTATTAAGGTTGGTTTTATTGAAGATTCAGAATCATGGTCACTAGATTCTTCATGCATTGTTTGGGTGAAATCTTTATCAAGGAATGTGCTTC
TACATCTCCTATGCAAAGGGATCTATTTCAGGCCAATGTTCACGAGCGAGTTAATGCTTACAATACAGTTTTGGTTAGATACGTGGGTTGCTAGTGGTTCAACTTTTGAA
GATTGGGATGGTGTTTCATGCTCTTGGAATACGTTCTTTAGAAGCCTTCTTAAAGATGATGAGATTGTTGATTTTTAG
Protein sequenceShow/hide protein sequence
MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFVATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDV
PPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANKQLS
VVVVAAAASLRFSAAVVVYFFHSCRHSLVAGFALILYSLLTDTIKVGFIEDSESWSLDSSCIVWVKSLSRNVLLHLLCKGIYFRPMFTSELMLTIQFWLDTWVASGSTFE
DWDGVSCSWNTFFRSLLKDDEIVDF