CuGenDBv2

Gene ID	Chy11G204190
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ribosome biogenesis NEP1-like protein
Genome location	chrH11:24719663..24720167
RNA-Seq Expression	Chy11G204190
Synteny	Chy11G204190
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ADN33694.1 hypothetical protein [Cucumis melo subsp. melo]

5.91e-68

96.33

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTLPDPVH DPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAG+DPTRR
Subjt:  TAGIDPTRR

KAA0039866.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa]

1.83e-69

97.25

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTLPDPVHPDPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAG+DPTRR
Subjt:  TAGIDPTRR

XP_004140656.2 uncharacterized protein LOC101206372 [Cucumis sativus]

3.73e-68

97.25

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTL DPVHPDPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAGIDPTRR
Subjt:  TAGIDPTRR

XP_008459927.1 PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]

9.67e-68

96.33

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTLPDPVH DPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAG+DPTRR
Subjt:  TAGIDPTRR

XP_038906484.1 uncharacterized protein LOC120092464 [Benincasa hispida]

4.36e-63

89.91

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIV+GMVAV VSI THTAKQQLLHSPVVN SKKKRESIPEV+DPDT+I SA+KFINKSFLRKVAHIQ DTKTLPDPVHP+PFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAG+DPTRR
Subjt:  TAGIDPTRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC39 Uncharacterized protein

1.1e-51

97.25

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTL DPVHPDPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAGIDPTRR
Subjt:  TAGIDPTRR

A0A1S3CBE5 uncharacterized protein LOC103498899

2.4e-51

96.33

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTLPDPVH DPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAG+DPTRR
Subjt:  TAGIDPTRR

A0A5D3DLZ1 Putative Ribosome biogenesis protein NEP1-like

1.7e-52

97.25

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTLPDPVHPDPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAG+DPTRR
Subjt:  TAGIDPTRR

A0A6J1D5L1 uncharacterized protein LOC111017496 isoform X2

2.2e-44

86.92

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMV V V+I THTAKQQLLHSPVV  SKKKRESIPEV+DPDTVITSADKF+NKSFLRKVAHIQ+  KTL DP HPDPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPT
        TAG+DPT
Subjt:  TAGIDPT

E5GB52 Uncharacterized protein

2.4e-51

96.33

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Query:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK
        MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP+VNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ+DTKTLPDPVH DPFTRPRNAETLK
Subjt:  MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLK

Query:  TAGIDPTRR
        TAG+DPTRR
Subjt:  TAGIDPTRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G63060.1 unknown protein

4.5e-26

51.43

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Query:  GEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKT-LPDPVHPDPFTRPRNAETLKT
        GE+AP+ I+ G V + V +A H+ KQQL+H+P ++  K +R ++ EV+DP+  ++SADKFINKS+LRKV  IQ+ +K  L DP  P+PFT PRNAETL +
Subjt:  GEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKT-LPDPVHPDPFTRPRNAETLKT

Query:  AGIDP
         G+ P
Subjt:  AGIDP

AT5G07330.1 unknown protein

1.3e-20

41.12

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Query:  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTK--TLPDPVHPDPFTRPRNAETL
        KG++ P+Y+ +G++++ V+   +TA   L  +P V  +KK RE++PE+EDPD V+  AD+F N+S+ RK+AH+Q   K   + DP+  D F     A TL
Subjt:  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTK--TLPDPVHPDPFTRPRNAETL

Query:  KTAGIDP
        K  G+DP
Subjt:  KTAGIDP

Sequences

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CDS sequence

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ATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGAATGGTGGCAGTGGTCGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGGTG
GTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGAGGACCCCGACACCGTCATCACTTCCGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAG
GTTGCTCACATTCAGAATGACACCAAGACGCTACCCGATCCAGTTCATCCCGATCCATTTACCCGGCCACGTAATGCTGAAACTCTGAAAACTGCAGGAATTGAC
CCTACCCGCCGTTGA

mRNA sequence

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Protein sequence

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MKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPVVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQNDTKTLPDPVHPDPFTRPRNAETLKTAGID
PTRR

Chy11G204190 (gene) of Cucumber (hystrix) v1 genome