CuGenDBv2

Gene ID	Chy11G205280
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome location	chrH11:25532831..25535669
RNA-Seq Expression	Chy11G205280
Synteny	Chy11G205280
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0005743 - mitochondrial inner membrane (cellular component)
InterPro domains	IPR007523 - NDUFAF3/Mth938 domain-containing protein IPR034095 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 IPR036748 - MTH938-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008460070.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis melo]

1.24e-115

97.08

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLP+LIRTLKN+RRKPGFSQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEITPDSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

XP_031742645.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]

6.13e-116

98.25

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLPNLIRTLKN+RRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEIT DSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNA STYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

XP_031743290.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]

1.51e-116

98.83

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLPNLIRTLKN+RRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEIT DSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

XP_031745505.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]

1.45e-114

97.08

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAAR KAVATLPNLIRTLKN+RRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEIT DSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQIVRPIPEILILGCGRYT+PVNPELRQFIRSTGMKLEAVDTRNA STYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

XP_038906819.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida]

4.15e-114

95.91

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLPNLIR+L+N+RR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEITP+SLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CB84 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

3.5e-89

97.08

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLP+LIRTLKN+RRKPGFSQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEITPDSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

A0A5A7TES8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

3.5e-89

97.08

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLP+LIRTLKN+RRKPGFSQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEITPDSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

A0A6J1HIQ3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

8.8e-85

91.23

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLPNLIR+++ +RR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVGNLLMSW+PKKFSEITP+SLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQI+RPIPEIL+LGCGRY EPVNP+LRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

A0A6J1KD25 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

2.2e-83

90.06

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MAARQKAVATLPNLIR+++ +RR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ YTETGFTVNG+DYEGSLLCVG+LLMSW+PKKFSEITP+SLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQI+RPIPEIL+LGCGRY EPVNPELRQFIRSTGMKLEAVD+RNA STYNILNEEGRIVAAALLPYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

A0A6P4B8N0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

4.7e-78

85.38

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MA R++AVATLP LIR+L+ E  KP F + LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW PKKFS+ITPDSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        +FQIVRPIPEILILGCGR+ EPVNPELR F+RSTGMKLEA+D+RNA STYNILNEEGRIVAAA++PYGVSS
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

SwissProt top hits

e value

%identity

Alignment

O08776 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

4.9e-16

33.87

Show/hide

Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+ N     +    Y   GFT+NG    G    +   ++ W      +IT +S SIF ++ P  EI+++G G  TE ++ ++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  TRNAASTYNILNEEGRIVAAALLP
        T NA +T+N L  EGR+  AAL+P
Subjt:  TRNAASTYNILNEEGRIVAAALLP

Q2HJI2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

4.2e-15

32.26

Show/hide

Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+       +    Y+  GF VNG    G    +   ++ W    + +IT +S S+F ++ P  EI+++G G  TE + P + + +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  TRNAASTYNILNEEGRIVAAALLP
        T NA +T+N L  EGR+  AAL+P
Subjt:  TRNAASTYNILNEEGRIVAAALLP

Q6DFN1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

6.4e-16

35.78

Show/hide

Query:  QRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEG
        + Y+  GF +NG    G    +   ++ W    + +I  +SLS+F ++ P  EIL++G G   E ++P + +F+R  G+ +E  DT NA +T+N L  E 
Subjt:  QRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEG

Query:  RIVAAALLP
        RI AAAL+P
Subjt:  RIVAAALLP

Q9BU61 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

3.2e-15

32.26

Show/hide

Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+       +    Y   GF +NG    G    + + ++ W      +IT DS S+F ++ P  EI+++G G  TE +  ++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  TRNAASTYNILNEEGRIVAAALLP
        T NA +T+N L  EGR+  AAL+P
Subjt:  TRNAASTYNILNEEGRIVAAALLP

Q9JKL4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

1.4e-15

32.26

Show/hide

Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+ +     +    Y+  GFT+ G    G  + +   ++ W      +IT +S S+F ++ P  EI+++G G  TE ++P++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  TRNAASTYNILNEEGRIVAAALLP
        T NA +T+N L  EGR+  AAL+P
Subjt:  TRNAASTYNILNEEGRIVAAALLP

Arabidopsis top hits

e value

%identity

Alignment

AT2G44525.1 Protein of unknown function (DUF498/DUF598)

1.6e-70

76.16

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSL
        MA R K++ATLP LI++++ E   P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ + +T FTVNGV YEGSLLCVGNLLMSW+P+KFSEIT DSL
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSL

Query:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        SIFQ VRPIPE+LI+GCGR   PV PE+RQF++S GMKLE VD+RNAASTYNILNEEGR+VAAALLPYGV+S
Subjt:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

AT3G60150.1 Protein of unknown function (DUF498/DUF598)

1.7e-72

77.78

Show/hide

Query:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS
        MA RQKA+ATLP LI++++NE  K   S  LPSLRRAFSLYDQINLIDNVPEDQLRFQ + ET FTVNGV YEGSLLCVGNLLMSW+P+ FS+IT DSLS
Subjt:  MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        IFQ VRPIPE+LI+GCGRY  P+NP++RQF++S GMKLE VD+RNAASTYNILNEEGRIVAAALLPYGV+S
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGCAAGGCAGAAAGCGGTGGCGACGCTGCCTAATCTAATTAGAACCCTTAAAAACGAACGCCGGAAGCCTGGTTTCAGCCAGCCTCTGCCGTCGTTGAGA
CGCGCCTTTTCACTTTACGATCAGATCAATCTCATTGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGGTTCACTGTGAATGGAGTG
GATTATGAGGGCAGCTTGCTTTGCGTTGGGAATTTGTTGATGTCTTGGACTCCTAAAAAATTTTCGGAAATTACGCCTGACAGCTTATCTATCTTCCAGATTGTA
CGCCCTATTCCAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCT
GTAGACACGAGAAATGCGGCATCAACTTATAATATCCTAAATGAGGAGGGTAGAATTGTAGCTGCAGCACTTCTGCCTTATGGAGTTTCTTCATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAARQKAVATLPNLIRTLKNERRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITPDSLSIFQIV
RPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

Chy11G205280 (gene) of Cucumber (hystrix) v1 genome