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Chy12G212340 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy12G212340
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionHistone deacetylase
Genome locationchrH12:9050431..9051288
RNA-Seq ExpressionChy12G212340
SyntenyChy12G212340
Gene Ontology termsGO:0016575 - histone deacetylation (biological process)
GO:0065007 - biological regulation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0004407 - histone deacetylase activity (molecular function)
GO:0015631 - tubulin binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025520.1 histone deacetylase 14 isoform X1 [Cucumis melo var. makuwa]1.45e-1266.67Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PKF     LGSN+I+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
KAE8647460.1 hypothetical protein Csa_003827 [Cucumis sativus]5.84e-1368.52Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PKF     LGSNVI+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
TYK25676.1 histone deacetylase 14 isoform X2 [Cucumis melo var. makuwa]1.31e-1366.67Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PKF     LGSN+I+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
XP_004148663.1 histone deacetylase 14 isoform X1 [Cucumis sativus]1.10e-1268.52Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PKF     LGSNVI+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
XP_031743012.1 histone deacetylase 14 isoform X2 [Cucumis sativus]8.82e-1368.52Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PKF     LGSNVI+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
TrEMBL top hitse value%identityAlignment
A0A0A0KHP9 Histone deacetylase1.2e-0968.52Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PK     FLGSNVI+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
A0A1S3B249 Histone deacetylase1.6e-0966.67Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PK     FLGSN+I+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
A0A1S3B3B9 Histone deacetylase1.6e-0966.67Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PK     FLGSN+I+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
A0A5A7SH99 Histone deacetylase1.6e-0966.67Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PK     FLGSN+I+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
A0A5D3DPS2 Histone deacetylase1.6e-0966.67Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        ESH+ V  +AN LED+EL PK     FLGSN+I+LENYKP SVDDIV+V SKSY
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33470.1 histone deacetylase 141.2e-0442.59Show/hide
Query:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY
        E    V  + N LE  EL PKF      GS ++EL N+K  +V+DI NV  K+Y
Subjt:  ESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACGGAATCTCATATCACGGTTGCCACAGTAGCAAACGATCTTGAAGATATAGAACTCATACCTAAGTTCAATGTATTGCAGTTTCTAGGTTCAAACGTC
ATTGAACTTGAAAATTACAAACCTACTTCAGTTGATGACATTGTGAATGTTGATTCAAAATCATATGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAACGGAATCTCATATCACGGTTGCCACAGTAGCAAACGATCTTGAAGATATAGAACTCATACCTAAGTTCAATGTATTGCAGTTTCTAGGTTCAAACGTC
ATTGAACTTGAAAATTACAAACCTACTTCAGTTGATGACATTGTGAATGTTGATTCAAAATCATATGGCTAG
Protein sequenceShow/hide protein sequence
MGTESHITVATVANDLEDIELIPKFNVLQFLGSNVIELENYKPTSVDDIVNVDSKSYG