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Chy12G220180 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy12G220180
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Rib s in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Genome locationchrH12:18259402..18260869
RNA-Seq ExpressionChy12G220180
SyntenyChy12G220180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584340.1 hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia]2.18e-5969.51Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTL---RCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI
        MKRA+WGAVF  CSR +S+SP  QT RS PLL  FSV      RCYSSGNDKYN LNST  +NKDSLV+DD+S EELKRKID+FYEG D +SLPAIFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTL---RCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDRRI
        LKRKLSGKH DADDELMKEIRQ++PGEVEDF  +EEYDSDL       D+      SEEEDRR+
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDRRI

XP_004137486.1 uncharacterized protein LOC101216147 [Cucumis sativus]4.05e-8892.9Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL
        MKRALWGAVF+V S TLSVSPP +TFRSRPLLSPFSV TLR YSSGNDKYNELNSTKNKDSLV+DDVSTEELKRKIDKFYEGGD DSLPAIFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASD-SEEEDRRI
        SGKHEDADDELMKEIRQQLPGEVEDF GEEEYDSDLMDDDSSDASD SEEEDRRI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASD-SEEEDRRI

XP_008461340.1 PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]3.66e-8387.66Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPP +TFRS PLLSPFSV TLRCYSSGNDKYNELNSTKNKDSLV+DDVSTEELKRKIDKFYEGGD DSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI
        SGKHEDADDELMKEIRQ++PGE+EDF GEE YDS+L DD    ASDSEEED+RI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI

XP_023519890.1 uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]6.56e-6170.12Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTL---RCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI
        MKRA+WGAVF VCSR +S+SP  QT RS PLL PFSV      RCYS+GNDKYN LNST  +NKDSLV+DDVS EELKRKID+FYEG D +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTL---RCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMD-----DDSSDASDSEEEDRRI
        LKRKLSGKH DADDELMKEIRQ++PGEVEDF  +EEYDSDL       D+  +   SEEEDRR+
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMD-----DDSSDASDSEEEDRRI

XP_038894045.1 uncharacterized protein LOC120082798 [Benincasa hispida]2.50e-6775.31Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL
        MKRAL GAVFNV SRTLSVSPP +TFRS  LLSPFS  +LR YSSGNDKYN LNSTKNKDSL+EDDVSTEELKRKIDKFYEG D +SLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMD--------DDSSDASDSEEEDRRI
        SGKHED D E+MKEIRQ++PG+VED  GEE YDSDL +        +D SD+SDSE+EDRR+
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMD--------DDSSDASDSEEEDRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LT17 Uncharacterized protein2.3e-6892.9Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL
        MKRALWGAVF+V S TLSVSPP +TFRSRPLLSPFSV TLR YSSGNDKYNELNSTKNKDSLV+DDVSTEELKRKIDKFYEGGD DSLPAIFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDAS-DSEEEDRRI
        SGKHEDADDELMKEIRQQLPGEVEDF GEEEYDSDLMDDDSSDAS DSEEEDRRI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDAS-DSEEEDRRI

A0A1S3CEX3 uncharacterized protein LOC1034999291.6e-6487.66Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPP +TFRS PLLSPFSV TLRCYSSGNDKYNELNSTKNKDSLV+DDVSTEELKRKIDKFYEGGD DSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI
        SGKHEDADDELMKEIRQ++PGE+EDF G EEYDS+L DD    ASDSEEED+RI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI

A0A5D3BIA4 Uncharacterized protein1.6e-6487.66Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPP +TFRS PLLSPFSV TLRCYSSGNDKYNELNSTKNKDSLV+DDVSTEELKRKIDKFYEGGD DSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKL

Query:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI
        SGKHEDADDELMKEIRQ++PGE+EDF G EEYDS+L DD    ASDSEEED+RI
Subjt:  SGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI

A0A6J1E804 uncharacterized protein LOC1114315722.5e-4669.51Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSV---LTLRCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI
        MKRA+WGAVF  CSR +S+SP  QT RS PLL  FSV      RCYSSGNDKYN LNST  +NKDSLV+DDVS EELKRKID+FYE GD +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSV---LTLRCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDRRI
        LKRKLSGKH DADDELMKEIRQ++PGEVEDF  +EEYDSDL       D+      SEEEDRR+
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDRRI

A0A6J1KP40 uncharacterized protein LOC1114952368.9e-4468.52Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSV---LTLRCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI
        MKRA+WGAVF  CSR +S+ P  QT RS PLL PFSV      RCYSSGNDKYN LNST  +NKDSLV+D VS EELKRKID+FYE GD +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSV---LTLRCYSSGNDKYNELNST--KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDR
        LKRKLSGKH DADDELMKEI Q++PGEVEDF  +EEYDSDL       D+  +   SEEEDR
Subjt:  LKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73770.1 FUNCTIONS IN: molecular_function unknown3.4e-1140.62Show/hide
Query:  STKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEE
        S  ++    E+ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  +R+     V D +  ++ DSD+  D   D+SDS+ E
Subjt:  STKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEE

AT1G73770.2 FUNCTIONS IN: molecular_function unknown3.4e-1140.62Show/hide
Query:  STKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEE
        S  ++    E+ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  +R+     V D +  ++ DSD+  D   D+SDS+ E
Subjt:  STKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEE

AT3G18240.1 Ribosomal protein S24/S35, mitochondrial8.3e-1031.58Show/hide
Query:  NVCSRTLSVSP--PQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNEL------NSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRK
        ++C+R + +SP    Q   + P L+P +       R +SS + + +          +  K  LV +DVS +ELK +I+K++  G+ D+LP + EA+L+R+
Subjt:  NVCSRTLSVSP--PQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNEL------NSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRK

Query:  LSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEED
        L  KH + DDEL+++I + LP   +D   +E+++SD    + + ++D E ED
Subjt:  LSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEED

AT3G18240.2 Ribosomal protein S24/S35, mitochondrial8.3e-1031.58Show/hide
Query:  NVCSRTLSVSP--PQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNEL------NSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRK
        ++C+R + +SP    Q   + P L+P +       R +SS + + +          +  K  LV +DVS +ELK +I+K++  G+ D+LP + EA+L+R+
Subjt:  NVCSRTLSVSP--PQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNEL------NSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRK

Query:  LSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEED
        L  KH + DDEL+++I + LP   +D   +E+++SD    + + ++D E ED
Subjt:  LSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEED

AT4G21460.1 Ribosomal protein S24/S35, mitochondrial1.1e-0933.54Show/hide
Query:  GAVF---NVCSRTLSVSPPQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNELNSTK-------NKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFE
        GA+F   ++C+R + +S   +   + P L+P +       R +SS + + N   +T+       +K  LV +DVS +ELK +IDK +  G+ D+LP + E
Subjt:  GAVF---NVCSRTLSVSPPQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNELNSTK-------NKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFE

Query:  AILKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEED
        A+L+R+L  KH + DDELM++I + LP   +D   +E+++SD    + + ++D E ED
Subjt:  AILKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGAGCTCTATGGGGAGCTGTCTTCAACGTCTGTTCTCGCACGCTTTCCGTTTCTCCTCCGCAACAAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGT
TCTCACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGAATTGAACTCAACCAAAAACAAGGACTCTCTCGTCGAAGATGATGTCAGCACCGAAGAGCTGAAGA
GGAAAATTGATAAATTTTATGAGGGTGGTGATACCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAG
CTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAATGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATTC
TGAGGAAGAAGATAGAAGAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGAGCTCTATGGGGAGCTGTCTTCAACGTCTGTTCTCGCACGCTTTCCGTTTCTCCTCCGCAACAAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGT
TCTCACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGAATTGAACTCAACCAAAAACAAGGACTCTCTCGTCGAAGATGATGTCAGCACCGAAGAGCTGAAGA
GGAAAATTGATAAATTTTATGAGGGTGGTGATACCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAG
CTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAATGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATTC
TGAGGAAGAAGATAGAAGAATATAA
Protein sequenceShow/hide protein sequence
MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDE
LMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI