; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy1G000180 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G000180
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCytochrome b6-f complex subunit 7
Genome locationchrH01:139295..139672
RNA-Seq ExpressionChy1G000180
SyntenyChy1G000180
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136999.1 uncharacterized protein LOC101210164 [Cucumis sativus]8.50e-7499.2Show/hide
Query:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMSSAAPISAGSRRQRQTNAH+ISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

XP_008454894.1 PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]1.90e-7296Show/hide
Query:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMS+AAPI+AGSRRQRQTN HYI+GLNSF GLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

XP_022952989.1 uncharacterized protein LOC111455503 [Cucurbita moschata]8.59e-6789.52Show/hide
Query:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        AT SATLS  +S+AAPI+AGSRRQR TN HYI+GLNSFSGLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]1.48e-6790.32Show/hide
Query:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLS A+S+AAPI+AGSRRQR TN HYI+GLNSF GLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_038887487.1 uncharacterized protein LOC120077620 [Benincasa hispida]1.50e-6992.8Show/hide
Query:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLS AM +AAPI+AGSRRQRQTN HYI+GLNSF GLKAHNNVVSLGLPVCADQSFA I+SSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K4W4 Uncharacterized protein6.3e-5699.2Show/hide
Query:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMSSAAPISAGSRRQRQTNAH+ISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

A0A1S3C0U4 uncharacterized protein LOC1034952012.0e-5496Show/hide
Query:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMS+AAPI+AGSRRQRQTN HYI+GLNSF GLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1C3G5 uncharacterized protein LOC1110080071.2e-4686.72Show/hide
Query:  MATASATLSTAMSSAAPISAGSRR-QRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIA
        MATASATLS AMS+AAPI+AGSRR QR  N HYI+GLNSF GLKAHNNVVSLGLP+C D SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSTAMSSAAPISAGSRR-QRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIA

Query:  AIINGLVLIGVAVGFVLLRIEASVEEAE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1GND2 uncharacterized protein LOC1114555034.0e-5089.52Show/hide
Query:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        AT SATLS  +S+AAPI+AGSRRQR TN HYI+GLNSFSGLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

A0A6J1I5T0 uncharacterized protein LOC1114709411.0e-5090.32Show/hide
Query:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLS A+S+AAPI+AGSRRQR TN HYI+GLNSF GLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)6.1e-0880.56Show/hide
Query:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE
        NAA EIFRIAA++NGL L+GVA+GFVLLRIEA+VEE
Subjt:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative2.3e-2656.35Show/hide
Query:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI
        A A A +S   S     S  ++++ +    YI+GLNS+ GLKA NN VVS+G P+C +Q FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI
Subjt:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative2.3e-2656.35Show/hide
Query:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI
        A A A +S   S     S  ++++ +    YI+GLNS+ GLKA NN VVS+G P+C +Q FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI
Subjt:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative8.8e-1037.6Show/hide
Query:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        A A A +S   S     S  ++++ +    YI+GLNS+ GLKA NN VVS+G P+C +Q FA +V SLK                               
Subjt:  ATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
              G  VGFVLLRIE SVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTATATTTCTGGG
CTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATAC
CCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCGCTTTCTTCCACCTGTAATGCCGCCGGTGAGATCTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTT
ATTGGAGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTATATTTCTGGG
CTCAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATAC
CCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCGCTTTCTTCCACCTGTAATGCCGCCGGTGAGATCTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTT
ATTGGAGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGA
Protein sequenceShow/hide protein sequence
MATASATLSTAMSSAAPISAGSRRQRQTNAHYISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL
IGVAVGFVLLRIEASVEEAE