; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy1G000570 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G000570
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationchrH01:427155..430294
RNA-Seq ExpressionChy1G000570
SyntenyChy1G000570
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]3.59e-15981.02Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSF+S  LADRQ PMP AS+T DSTGFNSESHSSSITVDGSK F DSHHCLQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRRMHALS KQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPIM D SSSELMVLQDASWQKA+IGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEE  SCSDRRHIR+MTNSCGSARN Q TRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ------------------------------KSIVKKVRKVTTIILPEDLR
         NSYTIITEVSDQNFVDNQP ELSGGMP AKRLKKASS F D+ Q                              KSIVKKVRKVTTIILPEDLR
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ------------------------------KSIVKKVRKVTTIILPEDLR

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]4.58e-16493.88Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSFLSP LADRQ PMPLASAT DSTGFNSESHSSSIT+DGSKHFFDSHHC QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR MHALSPKQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPI PDISSSELMVLQDASWQKA+IGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEE ESCSDRRHIRYMTNSC SARN QPTRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ
        CNSYTIITEVSDQNFVDNQP ELS GMPIAKRLKKASSDFSDS Q
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]6.08e-15389.39Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSF+S  LADRQ PMP AS+T DSTGFNSESHSSSITVDGSK F DSHHCLQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRRMHALS KQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPIM D SSSELMVLQDASWQKA+IGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEE  SCSDRRHIR+MTNSCGSARN Q TRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ
         NSYTIITEVSDQNFVDNQP ELSGGMP AKRLKKASS F D+ Q
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ

XP_011658902.1 cold-regulated protein 28 isoform X2 [Cucumis sativus]4.11e-12578.37Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSFLSP LADRQ PMPLASAT DSTGFNSESHSSSIT+DGSKHFFDSHHC QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR MHALSPKQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPI PDISSSE+         + HI                       H  S  KQCSLETPDLLEE ESCSDRRHIRYMTNSC SARN QPTRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ
        CNSYTIITEVSDQNFVDNQP ELS GMPIAKRLKKASSDFSDS Q
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ

XP_038887003.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]4.42e-11473.17Show/hide
Query:  MGDSHTPSFLSPR-LADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQ
        MG SHT S +SP  L DR+  +   SA+ DST   S+S SSSIT+DGS  F  SHH LQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRR HALS +Q
Subjt:  MGDSHTPSFLSPR-LADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQ

Query:  KMRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPC
        KM  KP MP+ISSSELM+LQDASWQKA+IGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEE  SCSDRRH+R  +NSCGSAR+ Q   PC
Subjt:  KMRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPC

Query:  CCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ
        C +S  IITEVSDQNFVD+ P ELSGG+PIAKRLKK SSD S + Q
Subjt:  CCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein2.0e-12893.88Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSFLSP LADRQ PMPLASAT DSTGFNSESHSSSIT+DGSKHFFDSHHC QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR MHALSPKQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPI PDISSSELMVLQDASWQKA+IGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEE ESCSDRRHIRYMTNSC SARN QPTRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ
        CNSYTIITEVSDQNFVDNQP ELS GMPIAKRLKKASSDFSDS Q
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ

A0A1S3BZQ8 uncharacterized protein LOC103495241 isoform X21.1e-8973.88Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSF+S  LADRQ PMP AS+T DSTGFNSESHSSSITVDGSK F DSHHCLQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRRMHALS KQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPIM D SSSE+         + HI                       H  S  KQCSLETPDLLEE  SCSDRRHIR+MTNSCGSARN Q TRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ
         NSYTIITEVSDQNFVDNQP ELSGGMP AKRLKKASS F D+ Q
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X15.9e-12089.39Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSF+S  LADRQ PMP AS+T DSTGFNSESHSSSITVDGSK F DSHHCLQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRRMHALS KQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPIM D SSSELMVLQDASWQKA+IGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEE  SCSDRRHIR+MTNSCGSARN Q TRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ
         NSYTIITEVSDQNFVDNQP ELSGGMP AKRLKKASS F D+ Q
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQ

A0A5D3C4A3 Cold regulated protein 27, putative isoform 25.5e-12681.36Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK
        MGDSHTPSF+S  LADRQ PMP AS+T DSTGFNSESHSSSITVDGSK F DSHHCLQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRRMHALS KQK
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQK

Query:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC
        MRRKPIM D SSSELMVLQDASWQKA+IGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEE  SCSDRRHIR+MTNSCGSARN Q TRPCC
Subjt:  MRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSD------------------------------SGQKSIVKKVRKVTTIILPEDLR
         NSYTIITEVSDQNFVDNQP ELSGGMP AKRLKKASS F D                              S QKSIVKKVRKVTTIILPEDLR
Subjt:  CNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSD------------------------------SGQKSIVKKVRKVTTIILPEDLR

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X22.3e-8767.45Show/hide
Query:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSK---HFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSP
        M D+HTPS +SP +ADR+ PM ++++  D T  NSES+SSS TVD S+       SHHC QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R + ALS 
Subjt:  MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSK---HFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSP

Query:  KQKMRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTR
        KQKMRRKPIMP+ISSSE MVLQDASWQKA++GR DPLLDKTADSPAILED+WINHFPSAG QC+LET D+LEE  SCSDR HIR  TNS  SAR+ Q   
Subjt:  KQKMRRKPIMPDISSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTR

Query:  PCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQKSIVKKV
        PCC +S+TI+TEVSDQNFVD  P ELS G PI KRLKKASSD S + + +  K++
Subjt:  PCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDSGQKSIVKKV

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 271.1e-0627.75Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK ++ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV+   E + G    +K++K      S S
Subjt:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS

Q8L983 Cold-regulated protein 286.0e-0527.9Show/hide
Query:  ASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ-----HRRMHALSPKQKMRRKPIMPDISSSELMVL
        ASA   S    S S  S +T + S+   DS    +LD E T WT+EKH  YLD LE+SFV+ L+       +R+      Q    K      S+ +  VL
Subjt:  ASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ-----HRRMHALSPKQKMRRKPIMPDISSSELMVL

Query:  QDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPT--RPCCCNSYTIITEVSDQNFV
        Q+  WQK + G+                           KQ  LET       E    R  +R    +         T      C+  T  +E S QNF 
Subjt:  QDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPT--RPCCCNSYTIITEVSDQNFV

Query:  DNQPEELSGGMPIAKRLKKASSDFSDSGQKSIV
        + + EE  G +   KR ++A++D S   +  +V
Subjt:  DNQPEELSGGMPIAKRLKKASSDFSDSGQKSIV

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)4.3e-0627.9Show/hide
Query:  ASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ-----HRRMHALSPKQKMRRKPIMPDISSSELMVL
        ASA   S    S S  S +T + S+   DS    +LD E T WT+EKH  YLD LE+SFV+ L+       +R+      Q    K      S+ +  VL
Subjt:  ASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ-----HRRMHALSPKQKMRRKPIMPDISSSELMVL

Query:  QDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPT--RPCCCNSYTIITEVSDQNFV
        Q+  WQK + G+                           KQ  LET       E    R  +R    +         T      C+  T  +E S QNF 
Subjt:  QDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPT--RPCCCNSYTIITEVSDQNFV

Query:  DNQPEELSGGMPIAKRLKKASSDFSDSGQKSIV
        + + EE  G +   KR ++A++D S   +  +V
Subjt:  DNQPEELSGGMPIAKRLKKASSDFSDSGQKSIV

AT4G33980.2 FUNCTIONS IN: molecular_function unknown4.3e-0627.9Show/hide
Query:  ASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ-----HRRMHALSPKQKMRRKPIMPDISSSELMVL
        ASA   S    S S  S +T + S+   DS    +LD E T WT+EKH  YLD LE+SFV+ L+       +R+      Q    K      S+ +  VL
Subjt:  ASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ-----HRRMHALSPKQKMRRKPIMPDISSSELMVL

Query:  QDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPT--RPCCCNSYTIITEVSDQNFV
        Q+  WQK + G+                           KQ  LET       E    R  +R    +         T      C+  T  +E S QNF 
Subjt:  QDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPT--RPCCCNSYTIITEVSDQNFV

Query:  DNQPEELSGGMPIAKRLKKASSDFSDSGQKSIV
        + + EE  G +   KR ++A++D S   +  +V
Subjt:  DNQPEELSGGMPIAKRLKKASSDFSDSGQKSIV

AT5G42900.1 cold regulated gene 277.8e-0827.75Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK ++ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV+   E + G    +K++K      S S
Subjt:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS

AT5G42900.2 cold regulated gene 277.8e-0827.75Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK ++ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV+   E + G    +K++K      S S
Subjt:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS

AT5G42900.3 cold regulated gene 272.7e-0827.75Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK ++ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMR--------RKPIMPDISSSELMVLQDASWQKAHIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS
        +    K     T +   +  S S+ +     + S  S +    +     +  ++  EVSDQNFV+   E + G    +K++K      S S
Subjt:  FPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQPEELSGGMPIAKRLKKASSDFSDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGACTCTCATACGCCGTCGTTTCTCTCACCGCGGCTTGCAGATCGACAATTACCCATGCCGCTGGCCTCTGCTACTATCGACTCCACTGGCTTCAACTCGGAATC
TCACTCTTCTTCCATTACTGTTGACGGGTCCAAGCATTTTTTCGATTCTCATCATTGTTTGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTAT
ATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCATGCCTGATATA
TCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTCACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGA
TCTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATATGAAAGTTGTAGTGATAGGAGACACATAAGATACATGA
CGAACTCCTGTGGATCTGCCAGAAATTTTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCA
GAAGAGTTGTCTGGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCAGACAGTGGCCAGAAGAGCATTGTAAAGAAAGTAAGGAAAGTGACAAC
AATAATTTTACCAGAAGATCTGCGGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGACTCTCATACGCCGTCGTTTCTCTCACCGCGGCTTGCAGATCGACAATTACCCATGCCGCTGGCCTCTGCTACTATCGACTCCACTGGCTTCAACTCGGAATC
TCACTCTTCTTCCATTACTGTTGACGGGTCCAAGCATTTTTTCGATTCTCATCATTGTTTGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTAT
ATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCATGCCTGATATA
TCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTCACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGA
TCTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATATGAAAGTTGTAGTGATAGGAGACACATAAGATACATGA
CGAACTCCTGTGGATCTGCCAGAAATTTTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCA
GAAGAGTTGTCTGGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCAGACAGTGGCCAGAAGAGCATTGTAAAGAAAGTAAGGAAAGTGACAAC
AATAATTTTACCAGAAGATCTGCGGCAGTAA
Protein sequenceShow/hide protein sequence
MGDSHTPSFLSPRLADRQLPMPLASATIDSTGFNSESHSSSITVDGSKHFFDSHHCLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRMHALSPKQKMRRKPIMPDI
SSSELMVLQDASWQKAHIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEYESCSDRRHIRYMTNSCGSARNFQPTRPCCCNSYTIITEVSDQNFVDNQP
EELSGGMPIAKRLKKASSDFSDSGQKSIVKKVRKVTTIILPEDLRQ