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Chy1G004880 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G004880
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchrH01:3526827..3527980
RNA-Seq ExpressionChy1G004880
SyntenyChy1G004880
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144609.1 uncharacterized protein LOC101208968 [Cucumis sativus]1.31e-8998.54Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAF+GWTREHFTRLDTDRDGFLSYAEMLKELH LRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS

XP_008455505.1 PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo]1.03e-8696.35Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAF+GWTREHFTRLDTDRDGFLSYAEMLKE +TLRVSEADFGTDVK DADELSQLY AVFKQFDRDSDGKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS

XP_011657544.1 uncharacterized protein LOC105435869 [Cucumis sativus]2.93e-5467.94Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVE+LD ATIVNFVED+ AF  + R+ F  LDT+RDG LSY+EML+ELHTLRV E  FG DVKPD DELS +YS++F QFDRDS G VD+DEF    K 
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQRE
        MMLA+A GMGFLP+QM LE+  FLMKAV+RE
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQRE

XP_022135904.1 uncharacterized protein LOC111007741 [Momordica charantia]8.62e-6170.9Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVE+LD ATI+NFVEDEEAF  W RE F  LD DRDG LSYAEML+ELH+LRV E  FG D KPD DELS+LY AVF QFDR+S+G+VD++EFM G K 
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATK
        +M+AIAEGMGFLP+QMALE+DGFLMKAV+ E ++
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATK

XP_038887184.1 uncharacterized protein LOC120077371 [Benincasa hispida]1.16e-8392.7Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAF+GWTREHF  LDTD DGFLSYAEMLKELH+LRVSEADFGTDVKPDAD+LS+LY AVF QFDRDS+GKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein4.6e-4267.94Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVE+LD ATIVNFVED+ AF  + R+ F  LDT+RDG LSY+EML+ELHTLRV E  FG DVKPD DELS +YS++F QFDRDS G VD+DEF    K 
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQRE
        MMLA+A GMGFLP+QM LE+  FLMKAV+RE
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQRE

A0A1S3C0M6 uncharacterized protein LOC1034956569.2e-6796.35Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAF+GWTREHFTRLDTDRDGFLSYAEMLKE +TLRVSEADFGTDVK DADELSQLY AVFKQFDRDSDGKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS

A0A5A7UY59 Uncharacterized protein9.2e-6796.35Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVELLDGATIVNFVEDEEAF+GWTREHFTRLDTDRDGFLSYAEMLKE +TLRVSEADFGTDVK DADELSQLY AVFKQFDRDSDGKVDVDEFMMGMKN
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
        MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS

A0A5D3DDG8 Calcium-binding EF-hand family protein1.7e-4165.67Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVE+LD ATIVNFVEDEEAFSGW RE F+ LD DRDG L Y EMLKEL +LRV E  FG D KPD +ELS +Y+++F QFDRD +GKVD+ EFM   K 
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATK
        MMLA+A G+G  P+QM LE++ FL KAV RE+TK
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATK

A0A6J1C2T1 uncharacterized protein LOC1110077414.7e-4770.9Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        MSVE+LD ATI+NFVEDEEAF  W RE F  LD DRDG LSYAEML+ELH+LRV E  FG D KPD DELS+LY AVF QFDR+S+G+VD++EFM G K 
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATK
        +M+AIAEGMGFLP+QMALE+DGFLMKAV+ E ++
Subjt:  MMLAIAEGMGFLPIQMALEKDGFLMKAVQREATK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein3.2e-1130.47Show/hide
Query:  LLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLA
        ++   T++ F+ D ++F   T ++F  LD D++G LS +E+ + L+ +   E    ++V P  DE   +Y+A+F++F  D   K     F   +  ++ A
Subjt:  LLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLA

Query:  IAEGMGFLPIQMALEKDGFLMKAVQREA
        +A G+G  P+ M +  DG +MKAV  E+
Subjt:  IAEGMGFLPIQMALEKDGFLMKAVQREA

AT2G44310.1 Calcium-binding EF-hand family protein6.4e-2845.59Show/hide
Query:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN
        M V L+DG+T+ +FV+DEE F     E F  LD ++DG LS +E+ K   ++R+ E+ FG DV    DEL+ LY ++F++FD D  G VD++EF   MK 
Subjt:  MSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKN

Query:  MMLAIAEGMGFLPIQMAL--EKDGFLMKAVQREATK
        ++LAIA+G+G  PI M L  + D FL KA   EA+K
Subjt:  MMLAIAEGMGFLPIQMAL--EKDGFLMKAVQREATK

AT4G38810.2 Calcium-binding EF-hand family protein3.0e-0931.93Show/hide
Query:  ELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMML
        ++LDG+ IV  VE+E+ F  +  + F +LD D DG LS  E+   +  +  +         PD+D    +YS V  +F   S  KV   EF   + +++L
Subjt:  ELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMML

Query:  AIAEGMGFLPIQMALEKDG
         +A G+   PI + L  DG
Subjt:  AIAEGMGFLPIQMALEKDG

AT5G28830.1 calcium-binding EF hand family protein3.8e-0426.56Show/hide
Query:  VELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMM
        V +LDG  +  F+EDE+ F+      FT LD +  G L  +E+ K L  + V   + G    P   E   +   + K+ D DSD ++   +F   ++ ++
Subjt:  VELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMM

Query:  LAIAEGMGFLPIQMALEKDGFLMKAVQR
          IA+ +   PI + L  + F    +++
Subjt:  LAIAEGMGFLPIQMALEKDGFLMKAVQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAGTGGATTATGAGGAGATGAGCGTAGAATTACTTGACGGCGCCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAGTGGTTGGACTAGAGAG
CACTTCACCCGTCTTGACACTGACCGCGACGGCTTCCTCTCCTACGCCGAGATGCTGAAGGAGTTGCATACTTTGAGAGTCTCCGAAGCTGACTTTGGAACCGAT
GTGAAACCTGATGCCGATGAGCTCTCTCAACTCTACAGTGCCGTCTTCAAGCAGTTCGATCGGGATTCGGATGGAAAAGTTGACGTGGATGAGTTCATGATGGGG
ATGAAGAACATGATGTTGGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCTTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAAAGAGAAGCC
ACCAAAGCCTTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAGTGGATTATGAGGAGATGAGCGTAGAATTACTTGACGGCGCCACCATAGTCAACTTCGTGGAAGACGAAGAAGCTTTCAGTGGTTGGACTAGAGAG
CACTTCACCCGTCTTGACACTGACCGCGACGGCTTCCTCTCCTACGCCGAGATGCTGAAGGAGTTGCATACTTTGAGAGTCTCCGAAGCTGACTTTGGAACCGAT
GTGAAACCTGATGCCGATGAGCTCTCTCAACTCTACAGTGCCGTCTTCAAGCAGTTCGATCGGGATTCGGATGGAAAAGTTGACGTGGATGAGTTCATGATGGGG
ATGAAGAACATGATGTTGGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCTTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAAAGAGAAGCC
ACCAAAGCCTTTTCTTGA
Protein sequenceShow/hide protein sequence
MGRVDYEEMSVELLDGATIVNFVEDEEAFSGWTREHFTRLDTDRDGFLSYAEMLKELHTLRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMG
MKNMMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS