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Chy1G004890 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G004890
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGlycine rich protein
Genome locationchrH01:3539937..3540582
RNA-Seq ExpressionChy1G004890
SyntenyChy1G004890
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059138.1 cold and drought-regulated protein CORA-like [Cucumis melo var. makuwa]6.41e-4371.67Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYSGF---------YGRGCQY
        MSSKAFVFLGLLLAF+LLL+S+VA RDLAETSS K D++A VETNGVEDAK GG  D  Y GGGGY RGGYGR  YG GGY G          YGRGC+Y
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYSGF---------YGRGCQY

Query:  GPCLYRCCRYAGEVVEGAKP
        G C YRCC YAGEVVEGAKP
Subjt:  GPCLYRCCRYAGEVVEGAKP

NP_001267708.1 glycine-rich protein-like precursor [Cucumis sativus]6.62e-3664.52Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSG---------GRNDSIYSGGGGYRRGGYGRDDYG----LGGYSGFYGR
        MSSKAFVFLGLLLAF+LLL+S+VA RDLAETSS K D++A VETNGVEDAK G         G +D  Y GG    RGGYGR  YG     GG  G YGR
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSG---------GRNDSIYSGGGGYRRGGYGRDDYG----LGGYSGFYGR

Query:  GCQYGPCLYRCCRYAGEVVEGAKP
        GC+YG C ++CC YAGEVVEGAKP
Subjt:  GCQYGPCLYRCCRYAGEVVEGAKP

XP_008455506.1 PREDICTED: cold and drought-regulated protein CORA-like [Cucumis melo]5.25e-4270.83Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYSGF---------YGRGCQY
        MSSKAFVFLGLLLAF+LLL+S+VA RDLAET S K D++A VETNGVEDAK GG  D  Y GGGGY RGGYGR  YG GGY G          YGRGC+Y
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYSGF---------YGRGCQY

Query:  GPCLYRCCRYAGEVVEGAKP
        G C YRCC YAGEVVEGAKP
Subjt:  GPCLYRCCRYAGEVVEGAKP

XP_038886926.1 cold and drought-regulated protein CORA-like isoform X1 [Benincasa hispida]1.91e-3969.83Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAA---VETNGVEDAKSGGRNDSIYSGG-GGYRRGGYGRDDYG-LGGYSGFYGRGCQYGPCL
        MSSKAFVFLGLLLAF+LL++S+VA RDLAETSS K +   A   VETNGVEDAK GG  D  Y GG GGY  GGYG   YG  GGY G Y RGC+YG C 
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAA---VETNGVEDAKSGGRNDSIYSGG-GGYRRGGYGRDDYG-LGGYSGFYGRGCQYGPCL

Query:  YRCCRYAGEVVEGAKP
        YRCC YAGEVVEGAKP
Subjt:  YRCCRYAGEVVEGAKP

XP_038886927.1 cold and drought-regulated protein CORA-like isoform X2 [Benincasa hispida]1.78e-4172.57Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGG-GGYRRGGYGRDDYG-LGGYSGFYGRGCQYGPCLYRC
        MSSKAFVFLGLLLAF+LL++S+VA RDLAETSS KKD++  VETNGVEDAK GG  D  Y GG GGY  GGYG   YG  GGY G Y RGC+YG C YRC
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGG-GGYRRGGYGRDDYG-LGGYSGFYGRGCQYGPCLYRC

Query:  CRYAGEVVEGAKP
        C YAGEVVEGAKP
Subjt:  CRYAGEVVEGAKP

TrEMBL top hitse value%identityAlignment
A0A0A0K6L7 Uncharacterized protein6.0e-2667.5Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSG-GRNDSIYSGGG----GYRRGGYGRDDY----GLGGYSGFYGRGCQY
        MSSKAFVFLGLLLAF+LLL+S+VA RDLAET SSK D++A VETNGVEDAK G G  D  Y GG     G  RGGYGR  Y    G GG  G YGRGC+Y
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSG-GRNDSIYSGGG----GYRRGGYGRDDY----GLGGYSGFYGRGCQY

Query:  GPCLYRCCRYAGEVVEGAKP
        G C ++CC YAGEVVEGAKP
Subjt:  GPCLYRCCRYAGEVVEGAKP

A0A1S3C180 cold and drought-regulated protein CORA-like1.4e-3070.83Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYS---------GFYGRGCQY
        MSSKAFVFLGLLLAF+LLL+S+VA RDLAET  SK D++A VETNGVEDAK GG  D  Y GGGGY RGGYGR  YG GGY          G YGRGC+Y
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYS---------GFYGRGCQY

Query:  GPCLYRCCRYAGEVVEGAKP
        G C YRCC YAGEVVEGAKP
Subjt:  GPCLYRCCRYAGEVVEGAKP

A0A5D3DE59 Cold and drought-regulated protein CORA-like2.8e-3171.67Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYS---------GFYGRGCQY
        MSSKAFVFLGLLLAF+LLL+S+VA RDLAET SSK D++A VETNGVEDAK GG  D  Y GGGGY RGGYGR  YG GGY          G YGRGC+Y
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYS---------GFYGRGCQY

Query:  GPCLYRCCRYAGEVVEGAKP
        G C YRCC YAGEVVEGAKP
Subjt:  GPCLYRCCRYAGEVVEGAKP

A0A6J1GM55 cold and drought-regulated protein CORA-like isoform X14.6e-2665.29Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGY-------GRDDY-GLGGY--SGFYGRGCQ
        MSSKAF+FLGLL A +LL++S+VA RDLAET S+KK+++A  ETNGVEDAK GG  D  Y G GGY RGGY       GR  Y G GGY   G YGRGC+
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGY-------GRDDY-GLGGY--SGFYGRGCQ

Query:  YGPCLYRCCRYAGEVVEGAKP
        YG C YRCC YAGEVVEGAKP
Subjt:  YGPCLYRCCRYAGEVVEGAKP

A0P8W6 Cell wall glycine-rich protein6.0e-2667.5Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSG-GRNDSIYSGGG----GYRRGGYGRDDY----GLGGYSGFYGRGCQY
        MSSKAFVFLGLLLAF+LLL+S+VA RDLAET SSK D++A VETNGVEDAK G G  D  Y GG     G  RGGYGR  Y    G GG  G YGRGC+Y
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSG-GRNDSIYSGGG----GYRRGGYGRDDY----GLGGYSGFYGRGCQY

Query:  GPCLYRCCRYAGEVVEGAKP
        G C ++CC YAGEVVEGAKP
Subjt:  GPCLYRCCRYAGEVVEGAKP

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein1.7e-0945.13Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYSGFYGRGCQYGPC------
        M SKAF+FLGL LAF  L++S+V   +LAETS+  K        NGV+    GG ND    GG GY  GG GR      G  G+  RGC+YG C      
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYSGFYGRGCQYGPC------

Query:  LYRCCRYAGEVVE
          RCC YAGE ++
Subjt:  LYRCCRYAGEVVE

Arabidopsis top hitse value%identityAlignment
AT2G05540.1 Glycine-rich protein family9.6e-0839.37Show/hide
Query:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQ-----AAVETNGVEDAKSGGRNDSIYSG--GGGY--RRGGYGRDDYGLGGYSGFYG-RG--
        M+SKA +FL L++  +LL+ S+V  RDLAE S+ +K+++        +  G      GG     Y G  GGGY  R GGY   D G G   G YG RG  
Subjt:  MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQ-----AAVETNGVEDAKSGGRNDSIYSG--GGGY--RRGGYGRDDYGLGGYSGFYG-RG--

Query:  -CQYGPC-------LYRCCRYAGEVVE
         C+YG C        +RCC YAG+ V+
Subjt:  -CQYGPC-------LYRCCRYAGEVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAAAAGCCTTTGTTTTCCTCGGCCTTCTTCTCGCCTTCATTCTTCTCCTCACGTCTCAGGTGGCCACAAGAGACCTTGCGGAAACCAGCTCCTCCAAA
AAGGACCATCAGGCCGCAGTGGAAACCAATGGCGTAGAGGATGCCAAGTCGGGAGGACGGAACGACAGTATCTACAGCGGTGGTGGTGGTTATCGTCGTGGTGGC
TATGGTCGTGATGACTACGGTCTTGGTGGCTATAGTGGTTTCTACGGCAGAGGTTGCCAATATGGTCCATGCTTGTACAGGTGCTGCAGGTACGCTGGTGAAGTA
GTAGAGGGTGCAAAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAAAAGCCTTTGTTTTCCTCGGCCTTCTTCTCGCCTTCATTCTTCTCCTCACGTCTCAGGTGGCCACAAGAGACCTTGCGGAAACCAGCTCCTCCAAA
AAGGACCATCAGGCCGCAGTGGAAACCAATGGCGTAGAGGATGCCAAGTCGGGAGGACGGAACGACAGTATCTACAGCGGTGGTGGTGGTTATCGTCGTGGTGGC
TATGGTCGTGATGACTACGGTCTTGGTGGCTATAGTGGTTTCTACGGCAGAGGTTGCCAATATGGTCCATGCTTGTACAGGTGCTGCAGGTACGCTGGTGAAGTA
GTAGAGGGTGCAAAACCCTAA
Protein sequenceShow/hide protein sequence
MSSKAFVFLGLLLAFILLLTSQVATRDLAETSSSKKDHQAAVETNGVEDAKSGGRNDSIYSGGGGYRRGGYGRDDYGLGGYSGFYGRGCQYGPCLYRCCRYAGEV
VEGAKP