; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy1G006100 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G006100
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchrH01:4353566..4373021
RNA-Seq ExpressionChy1G006100
SyntenyChy1G006100
Gene Ontology termsGO:0009228 - thiamine biosynthetic process (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008972 - phosphomethylpyrimidine kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025368.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]3.73e-3490.12Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL
        EDWTNARMLIRFL VFYD+TLKI GS YTTSNLVFH ITMVQNC+ LNVGSANALLVGMANNMKAKFEKYWGNN+KNNLLL
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL

KAA0042176.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]8.55e-3441.24Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL-LCWILEKN*DL-------
        EDWTNARMLI FL VFYD+TLKILGS YTTSNLVFH IT+VQNC+ LN GSANALLVGMANNMKAKFEKYWGNN++NNLLL +  +L+    L       
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL-LCWILEKN*DL-------

Query:  --LLNP*EMWTKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLS---NKGHRILISIC*NPIILGPKVILTYYSCER*IVIDLRLLV
             P E+   M        C RL   +   +   +    +    + + +S L  +   +    +      + I+   +  +T    E    ID+ LL 
Subjt:  --LLNP*EMWTKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLS---NKGHRILISIC*NPIILGPKVILTYYSCER*IVIDLRLLV

Query:  --VWLEIFWLFKFLL*RLS*LLVLRTCC*FITVFIGS*NNGGFEALTCSQNWLNFDPIDLQVQHKLE*ASKFED
          V  E+  +           +V  + C      +        EAL C+QNWLN  PI LQ+QH+LE ASKFE+
Subjt:  --VWLEIFWLFKFLL*RLS*LLVLRTCC*FITVFIGS*NNGGFEALTCSQNWLNFDPIDLQVQHKLE*ASKFED

KAA0048725.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.95e-3588.89Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL
        EDWTNARMLIRFL VFYD+TLKILGS YTTSNLVFH IT+VQNC+ LN GSANALLVGMANNMKAKFEKYWGNN+KNNLLL
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL

KAA0057609.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]5.30e-3486.42Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL
        EDWTNARMLIRFL VFYD+TLKI GS YTTSN+VFH IT+VQNC+ LN GSANALLVGMANNMKAKFEKYWGNN+KNNLLL
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL

TYK12117.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.95e-3439.78Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLLLCWILEKN*DLLLNP*EMW
        EDWTNARMLIRFL VFYD+TLKI GS YTTSNLVFH IT+VQNC+ LN GS NALLVGMANNMKAKFEKYWGNN+KNNLLL   I+       L+P +  
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLLLCWILEKN*DLLLNP*EMW

Query:  TKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLSNKGHRILISIC*NPIILGPKVILTYYSCER*IVI--DLRLLVVWLEIFWLFKF
          +      ++C + + +    +    +    Q  R+    ++++               P   G   I   Y  E  +    D  +L  W      F+ 
Subjt:  TKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLSNKGHRILISIC*NPIILGPKVILTYYSCER*IVI--DLRLLVVWLEIFWLFKF

Query:  LL*RLS*LLVLRTCC*FITVFIGS*NNGGF--------------EALTCSQNWLNFDPIDLQVQHKLE*ASKFEDTIQI
        L      +L +            + + GG               EA  C+QNWLN DPI LQ QH+LE ASKFE+  ++
Subjt:  LL*RLS*LLVLRTCC*FITVFIGS*NNGGF--------------EALTCSQNWLNFDPIDLQVQHKLE*ASKFEDTIQI

TrEMBL top hitse value%identityAlignment
A0A5A7SGU9 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.2e-3190.12Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL
        EDWTNARMLIRFL VFYD+TLKI GS YTTSNLVFH ITMVQNC+ LNVGSANALLVGMANNMKAKFEKYWGNN+KNNLLL
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL

A0A5A7U523 Zinc finger BED domain-containing protein RICESLEEPER 3-like8.8e-3188.89Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL
        EDWTNARMLIRFL VFYD+TLKILGS YTTSNLVFH IT+VQNC+ LN GSANALLVGMANNMKAKFEKYWGNN+KNNLLL
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL

A0A5A7U843 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.0e-3039.43Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLLLCWILEKN*DLLLNP*EMW
        EDWTNARMLIRFL VFYD+TLKI GS YTTSNLVFH IT+V NC+ LN GSANAL VGMANNMKAKFEKYWGNN+KNNLLL   I       +L+P +  
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLLLCWILEKN*DLLLNP*EMW

Query:  TKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLSNKGHRILISIC*NPIILGPKVILTYYSCER*IVI--DLRLLVVWLEIFWLFKF
          +      ++C + + +    +    +    Q  R+    ++++               P   G   I   Y  E  +    D  +L  W      F+ 
Subjt:  TKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLSNKGHRILISIC*NPIILGPKVILTYYSCER*IVI--DLRLLVVWLEIFWLFKF

Query:  LL*RLS*LLVLRTCC*FITVFIGS*NNGG--------------FEALTCSQNWLNFDPIDLQVQHKLE*ASKFEDTIQI
        L      +L +            + + GG               EA  C+QNWLN DPI LQ QH+LE ASKFE+  ++
Subjt:  LL*RLS*LLVLRTCC*FITVFIGS*NNGG--------------FEALTCSQNWLNFDPIDLQVQHKLE*ASKFEDTIQI

A0A5D3CJE5 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.3e-3139.78Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLLLCWILEKN*DLLLNP*EMW
        EDWTNARMLIRFL VFYD+TLKI GS YTTSNLVFH IT+VQNC+ LN GS NALLVGMANNMKAKFEKYWGNN+KNNLLL   I       +L+P +  
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLLLCWILEKN*DLLLNP*EMW

Query:  TKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLSNKGHRILISIC*NPIILGPKVILTYYSCER*IVI--DLRLLVVWLEIFWLFKF
          +      ++C + + +    +    +    Q  R+    ++++               P   G   I   Y  E  +    D  +L  W      F+ 
Subjt:  TKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLSNKGHRILISIC*NPIILGPKVILTYYSCER*IVI--DLRLLVVWLEIFWLFKF

Query:  LL*RLS*LLVLRTCC*FITVFIGS*NNGG--------------FEALTCSQNWLNFDPIDLQVQHKLE*ASKFEDTIQI
        L      +L +            + + GG               EA  C+QNWLN DPI LQ QH+LE ASKFE+  ++
Subjt:  LL*RLS*LLVLRTCC*FITVFIGS*NNGG--------------FEALTCSQNWLNFDPIDLQVQHKLE*ASKFEDTIQI

A0A5D3DTY7 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.3e-3041.24Show/hide
Query:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL-LCWILEKN*DL-------
        EDWTNARMLI FL VFYD+TLKILGS YTTSNLVFH IT+VQNC+ LN GSANALLVGMANNMKAKFEKYWGNN++NNLLL +  +L+    L       
Subjt:  EDWTNARMLIRFLTVFYDMTLKILGS-YTTSNLVFHPITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLL-LCWILEKN*DL-------

Query:  --LLNP*EMWTKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLS---NKGHRILISIC*NPIILGPKVILTYYSCER*IVIDLRLLV
             P E+   M        C RL   +   +   +    +    + + +S L  +   +    +      + I+   +  +T    E    ID+ LL 
Subjt:  --LLNP*EMWTKME*YN*YTYCFRLILNFIQMKMWVKILSMTQ*LRNLEVMSLLQLS---NKGHRILISIC*NPIILGPKVILTYYSCER*IVIDLRLLV

Query:  --VWLEIFWLFKFLL*RLS*LLVLRTCC*FITVFIGS*NNGGFEALTCSQNWLNFDPIDLQVQHKLE*ASKFED
          V  E+  +           +V  + C      +        EAL C+QNWLN  PI LQ+QH+LE ASKFE+
Subjt:  --VWLEIFWLFKFLL*RLS*LLVLRTCC*FITVFIGS*NNGGFEALTCSQNWLNFDPIDLQVQHKLE*ASKFED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TAAAAGATGTATAATGACAACACTTAAATAAGGAGAAGACGCAGGCAAGAAACCTTTGACTATTTGGTTTCTTTTTGATCTACGAACAGAGGCCAATACACTAAGATCTT
ATTATCATTCTCTTTCTCCTTCGACGCAAAACCGACTCGAATTCATGTGTACATTCTCGTGTTTGCATCAACGCCTTCTTAGCTATATGTCCAAGCAATGTCTCCCTCCA
ACCAGTTGTTGTGCACGAAATTCTTAAACAGATAAAATTTTAATCATTGTTGCTTTGCTTCTTAATCAATTAAATCAAATGGATTCAACCGATATGGAGTTTGGTGGGAG
AAACTTCAAAAATCGTAGGAAACGAAAATACAGATGTCAAGAGTAAAACCATCCTTAATGTTAATTCAGATGGAACTGAAGATATTTCAAATCCCAAAAAAAAAAGGAAG
AATGTCAAACAATCAATGGTTTGGGACCACTTTGAGTCTAAAGGTGATCCTAATGACCCTTATGCTAAATGTAAATATTGTGGAGTTGTTTATGCATGTCATTCTAAACG
TAATGGTACTGGAACTATGAAGCATCATTTGAAAAATTACAAAAGTACCCTTACCAAATAAAAAGAGAACAAACCCAAATGACATTACCTTTCAAACCTAAAAACAAAGT
TGGGGAAGTTTTGGTTGAAATGATAATAGTAGATGAATTGCTCTTTAAGTTTGTGGAGGACAAGGGGTTTAAGAAATTTGTGGATAAATTAACATATGGAAATCAAACTA
GATTTGTTGTTCTGTCTCGACTTACTGTGGCTAGAGATGTGCTTAAGTTATATGTTAATAAGAAAAATTGCTTGAGAGATATATTAGAAGATGAAAATGCCTCTTATAAA
CATGATGATTTGACATTGAAGATTGGACAAATGCTAGGATGTTAATACGATTTTTAACCGTCTTTTATGATATGACATTGAAGATTTTGGGCTCTTATACTACTTCGAAC
TTGGTTTTCCATCCTATTACAATGGTACAGAATTGTATGTGTTTGAATGTGGGTAGTGCAAATGCATTGTTAGTTGGAATGGCTAATAACATGAAGGCAAAATTTGAGAA
ATATTGGGGAAACAATAAAAAGAATAATTTGTTGCTATTGTGTTGGATCCTCGAAAAAAATTAAGATTTGTTGCTGAATCCATAAGAAATGTGGACCAAGATGGAGTAGT
ACAACTAGTACACATACTGTTTCAGGCTAATATTGAATTTTATTCAAATGAAAATGTGGGTGAAGATTTTGTCTATGACACAATGATTGAGGAATTTGGAGGTGATGTCT
CTACTACAGCTTTCGAACAAAGGTCATCGGATATTGATATCTATTTGTTGAAACCCAATTATTTTAGGACCGAAGGTGATTTTGACATACTACAGTTGTGAAAGATGAAT
CGTGATCGATTTGAGGTTATTGGTCGTATGGCTAGAGATATTTTGGCTATTCAAGTTTTTACTGTAGCGCCTGAGTTGACTTTTAGTACTGAGGACGTGTTGTTGATTCA
TCACGGTGTTCATTGGCTCCTAAAACAATGGAGGTTTTGAAGCTTTGACATGTTCTCAAAATTGGCTAAATTTTGATCCAATAGATCTTCAAGTTCAACATAAATTGGAA
TAGGCTTCAAAATTTGAAGATACTATTCAAATTTTTTAATGACACTGCAGTCTCAAAATTCCAATTTTGATAATTTAAATTAATTAATTTAAATTTTTATAAAAAGAAAA
AACATGTCAAATGTACATTCTACTAACTTCGATTTCTGAATATGGT
mRNA sequenceShow/hide mRNA sequence
TAAAAGATGTATAATGACAACACTTAAATAAGGAGAAGACGCAGGCAAGAAACCTTTGACTATTTGGTTTCTTTTTGATCTACGAACAGAGGCCAATACACTAAGATCTT
ATTATCATTCTCTTTCTCCTTCGACGCAAAACCGACTCGAATTCATGTGTACATTCTCGTGTTTGCATCAACGCCTTCTTAGCTATATGTCCAAGCAATGTCTCCCTCCA
ACCAGTTGTTGTGCACGAAATTCTTAAACAGATAAAATTTTAATCATTGTTGCTTTGCTTCTTAATCAATTAAATCAAATGGATTCAACCGATATGGAGTTTGGTGGGAG
AAACTTCAAAAATCGTAGGAAACGAAAATACAGATGTCAAGAGTAAAACCATCCTTAATGTTAATTCAGATGGAACTGAAGATATTTCAAATCCCAAAAAAAAAAGGAAG
AATGTCAAACAATCAATGGTTTGGGACCACTTTGAGTCTAAAGGTGATCCTAATGACCCTTATGCTAAATGTAAATATTGTGGAGTTGTTTATGCATGTCATTCTAAACG
TAATGGTACTGGAACTATGAAGCATCATTTGAAAAATTACAAAAGTACCCTTACCAAATAAAAAGAGAACAAACCCAAATGACATTACCTTTCAAACCTAAAAACAAAGT
TGGGGAAGTTTTGGTTGAAATGATAATAGTAGATGAATTGCTCTTTAAGTTTGTGGAGGACAAGGGGTTTAAGAAATTTGTGGATAAATTAACATATGGAAATCAAACTA
GATTTGTTGTTCTGTCTCGACTTACTGTGGCTAGAGATGTGCTTAAGTTATATGTTAATAAGAAAAATTGCTTGAGAGATATATTAGAAGATGAAAATGCCTCTTATAAA
CATGATGATTTGACATTGAAGATTGGACAAATGCTAGGATGTTAATACGATTTTTAACCGTCTTTTATGATATGACATTGAAGATTTTGGGCTCTTATACTACTTCGAAC
TTGGTTTTCCATCCTATTACAATGGTACAGAATTGTATGTGTTTGAATGTGGGTAGTGCAAATGCATTGTTAGTTGGAATGGCTAATAACATGAAGGCAAAATTTGAGAA
ATATTGGGGAAACAATAAAAAGAATAATTTGTTGCTATTGTGTTGGATCCTCGAAAAAAATTAAGATTTGTTGCTGAATCCATAAGAAATGTGGACCAAGATGGAGTAGT
ACAACTAGTACACATACTGTTTCAGGCTAATATTGAATTTTATTCAAATGAAAATGTGGGTGAAGATTTTGTCTATGACACAATGATTGAGGAATTTGGAGGTGATGTCT
CTACTACAGCTTTCGAACAAAGGTCATCGGATATTGATATCTATTTGTTGAAACCCAATTATTTTAGGACCGAAGGTGATTTTGACATACTACAGTTGTGAAAGATGAAT
CGTGATCGATTTGAGGTTATTGGTCGTATGGCTAGAGATATTTTGGCTATTCAAGTTTTTACTGTAGCGCCTGAGTTGACTTTTAGTACTGAGGACGTGTTGTTGATTCA
TCACGGTGTTCATTGGCTCCTAAAACAATGGAGGTTTTGAAGCTTTGACATGTTCTCAAAATTGGCTAAATTTTGATCCAATAGATCTTCAAGTTCAACATAAATTGGAA
TAGGCTTCAAAATTTGAAGATACTATTCAAATTTTTTAATGACACTGCAGTCTCAAAATTCCAATTTTGATAATTTAAATTAATTAATTTAAATTTTTATAAAAAGAAAA
AACATGTCAAATGTACATTCTACTAACTTCGATTTCTGAATATGGT
Protein sequenceShow/hide protein sequence
KMYNDNT*IRRRRRQETFDYLVSF*STNRGQYTKILLSFSFSFDAKPTRIHVYILVFASTPSLYVQAMSPSNQLLCTKFLNR*NFNHCCFAS*SIKSNGFNRYGVWWEKL
QKS*ETKIQMSRVKPSLMLIQMELKIFQIPKKKGRMSNNQWFGTTLSLKVILMTLMLNVNIVELFMHVILNVMVLELSII*KITKVPLPNKKRTNPNDITFQT*KQSWGS
FG*NDNSR*IAL*VCGGQGVEICG*INIWKSN*ICCSVSTYCG*RCA*VIC**EKLLERYIRR*KCLL*T**FDIEDWTNARMLIRFLTVFYDMTLKILGSYTTSNLVFH
PITMVQNCMCLNVGSANALLVGMANNMKAKFEKYWGNNKKNNLLLLCWILEKNDLLLNP*EMWTKME*YN*YTYCFRLILNFIQMKMWVKILSMTQLRNLEVMSLLQLSN
KGHRILISIC*NPIILGPKVILTYYSCER*IVIDLRLLVVWLEIFWLFKFLLRLS*LLVLRTCC*FITVFIGS*NNGGFEALTCSQNWLNFDPIDLQVQHKLEASKFEDT
IQIF**HCSLKIPILII*IN*FKFL*KEKTCQMYILLTSISEYG