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Chy1G006140 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G006140
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchrH01:4364032..4373021
RNA-Seq ExpressionChy1G006140
SyntenyChy1G006140
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025770.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]4.35e-1735.56Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLH
        MLE AVKFEKAFDRLEDE+ASY HDMSPNK+D       +F   TIV E   D                               STT + +    + + +
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLH

Query:  LSNMGHRRLISICWNLVLGLEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSK
        L     R  +S      +  E   + +S G   V  SR                          CSL P T+E L CTQNWLN DPI LQ QHE  E SK
Subjt:  LSNMGHRRLISICWNLVLGLEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSK

Query:  FEEFGWKVTELRELYLIIFMDFQQI
        FEE G++V    E  L    DF ++
Subjt:  FEEFGWKVTELRELYLIIFMDFQQI

KAA0046350.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.20e-1733.94Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP
        MLEAAVKFEKAFDRLEDE+ SY HDMSPNK+D     + + F+     ++L++         LV   FH   ++ N I++            + N+  M 
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP

Query:  LLHLSNMGHRRLISICWNLVLGLEV------------ILTYYSCG--R*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLN
        ++ L  +G  + + +  +  + + +            IL ++     R  V+      ++ + +  +    +   SR    CSL P T+E L CTQNWLN
Subjt:  LLHLSNMGHRRLISICWNLVLGLEV------------ILTYYSCG--R*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLN

Query:  SDPIDLQVQHEWGETSKFEEF
        SDPI LQ QHE  E SKFE F
Subjt:  SDPIDLQVQHEWGETSKFEEF

KAA0056220.1 transposase [Cucumis melo var. makuwa]8.89e-1735.87Show/hide
Query:  EAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLHLS
        ++AVKFEKA DRLEDE+ASY HDMSPNKK  QM                               AWMLIL + + +      STT + + L  + + +L 
Subjt:  EAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLHLS

Query:  NMGHRRLISICWNLVLGLEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFE
            R  +S      +  E   + +S G   V  SR                          CSL P T+E L CTQNWLNSDPI LQ QHE  E SKFE
Subjt:  NMGHRRLISICWNLVLGLEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFE

Query:  EFGWKVTELRELYLIIFMDFQQI
        E G++V    E  L   +DF ++
Subjt:  EFGWKVTELRELYLIIFMDFQQI

TYK04056.1 transposase [Cucumis melo var. makuwa]1.49e-1635.87Show/hide
Query:  EAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLHLS
        ++AVKFEKA DRLEDE+ASY HDMSPNKK  QM                               AWMLIL + + +      STT + + L  + + +L 
Subjt:  EAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLHLS

Query:  NMGHRRLISICWNLVLGLEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFE
            R  +S      +  E   + +S G   V  SR                          CSL P T+E L CTQNWLNSDPI LQ QHE  E SKFE
Subjt:  NMGHRRLISICWNLVLGLEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFE

Query:  EFGWKVTELRELYLIIFMDFQQI
        E G++V    E  L   +DF ++
Subjt:  EFGWKVTELRELYLIIFMDFQQI

TYK04573.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]7.98e-1934.78Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLH
        MLEAAVKFEKAFDRLEDE+ASY HDMSPNK+D     + + F+  +   +G   +VVEQ   +LFH +                STTR            
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLH

Query:  LSNMGHRRLISICWNLVLGLEVILTYYS---CGR*TVIDSRL*LVVW------------VEIFWLF*FLL*RPSRLLV--------------LCSLTPTT
         S  G   + +     V  L+  + + S    G   V D+ +                 ++I+ L   ++   S +                 CSL P T
Subjt:  LSNMGHRRLISICWNLVLGLEVILTYYS---CGR*TVIDSRL*LVVW------------VEIFWLF*FLL*RPSRLLV--------------LCSLTPTT

Query:  METLTCTQNWLNSDPIDLQVQHEWGETSKFEEFGWKVTELRELYLIIFMDFQQ
        +E L CTQNWLNSDPI LQ+QHE  E SKFEE G++V    E  L    DF +
Subjt:  METLTCTQNWLNSDPIDLQVQHEWGETSKFEEFGWKVTELRELYLIIFMDFQQ

TrEMBL top hitse value%identityAlignment
A0A1S4E139 zinc finger BED domain-containing protein RICESLEEPER 2-like9.8e-1330.71Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP
        M+EA VKFEKAFDRLEDENASY HDMS NK+D     + + F+     + L++    D    LV   FH   ++ N I++              N+K   
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP

Query:  LLHLSNMGHRRLISICWNLVLGLEV------------ILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLV----------------------
          +  N     ++ + +  ++ L+V             +  Y        +S   ++   ++      +L R +R ++                      
Subjt:  LLHLSNMGHRRLISICWNLVLGLEV------------ILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLV----------------------

Query:  -LCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFEE
          CSL P T+ETL CTQNWLNSDPIDLQ+Q E  + SKF+E
Subjt:  -LCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFEE

A0A5A7TT79 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.0e-1433.94Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP
        MLEAAVKFEKAFDRLEDE+ SY HDMSPNK+D     + + F+     ++L++         LV   FH   ++ N I++            + N+  M 
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP

Query:  LLHLSNMGHRRLISICWNLVLGLEV------------ILTYY--SCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLN
        ++ L  +G  + + +  +  + + +            IL ++  +  R  V+      ++ + +  +    +   SR    CSL P T+E L CTQNWLN
Subjt:  LLHLSNMGHRRLISICWNLVLGLEV------------ILTYY--SCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLN

Query:  SDPIDLQVQHEWGETSKFEEF
        SDPI LQ QHE  E SKFE F
Subjt:  SDPIDLQVQHEWGETSKFEEF

A0A5A7URL7 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-1333.21Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP
        MLEAAVKFEKAFDRLEDE+ASY HDMSPNK+D     + + F+     ++L++         LV   FH   ++ N I++              N+K   
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP

Query:  LLHLSNMGHRRLISICWN-------------LVLG-LEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLC------------------
          +   M  +R+I + +              +VLG LE+ +        T  D  + L  W      F  L      +L +                   
Subjt:  LLHLSNMGHRRLISICWN-------------LVLG-LEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLC------------------

Query:  ----SLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFEEFGWKVTELRELYLIIFMDFQQIRAIE
            SL P T+E L CTQNWLNSDPI LQ QHE  E SK EE  W V E  E  L    DF ++  I+
Subjt:  ----SLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFEEFGWKVTELRELYLIIFMDFQQIRAIE

A0A5D3BXV2 Zinc finger BED domain-containing protein RICESLEEPER 2-like7.3e-1637.12Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKV-MPLL
        MLEAAVKFEKAFDRLEDE+ASY HDMSPNK+D     + + F+  +   +G   +VVEQ   +LFH +    +  +        ++T+ + +L   +   
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKV-MPLL

Query:  HLSNMGHRRLISICWNLVLGLE-VILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLV---LCSLTPTTMETLTCTQNWLNSDPIDLQVQHEW
           N+G   +      +V   E    T +  G   +    L   V  E+  +           +V    CSL P T+E L CTQNWLNSDPI LQ+QHE 
Subjt:  HLSNMGHRRLISICWNLVLGLE-VILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLV---LCSLTPTTMETLTCTQNWLNSDPIDLQVQHEW

Query:  GETSKFEEFGWKVTELRELYLIIFMDFQQ
         E SKFEE G++V    E  L    DF +
Subjt:  GETSKFEEFGWKVTELRELYLIIFMDFQQ

A0A5D3C7L9 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-1333.21Show/hide
Query:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP
        MLEAAVKFEKAFDRLEDE+ASY HDMSPNK+D     + + F+     ++L++         LV   FH   ++ N I++              N+K   
Subjt:  MLEAAVKFEKAFDRLEDENASYIHDMSPNKKD*QMLGLNVFFMST---IVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMP

Query:  LLHLSNMGHRRLISICWN-------------LVLG-LEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLC------------------
          +   M  +R+I + +              +VLG LE+ +        T  D  + L  W      F  L      +L +                   
Subjt:  LLHLSNMGHRRLISICWN-------------LVLG-LEVILTYYSCGR*TVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLC------------------

Query:  ----SLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFEEFGWKVTELRELYLIIFMDFQQIRAIE
            SL P T+E L CTQNWLNSDPI LQ QHE  E SK EE  W V E  E  L    DF ++  I+
Subjt:  ----SLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFEEFGWKVTELRELYLIIFMDFQQIRAIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAAGCTGCTGTTAAGTTTGAAAAGGCTTTTGATAGATTAGAAGATGAAAATGCCTCTTATATACATGATATGTCACCAAATAAAAAAGATTGACAAATG
CTAGGATTAAACGTCTTTTTCATGAGTACAATAGTACTCGAGGTGGGAGTGGACCATGATGTAGTAGAACAACTAGTGCACAAACTGTTTCATGCTTGGATGTTA
ATATTGAATTTGATTCAAATGAAAATGTGGGTGAAGATTTTGTCTACGACACGATGGTTGAGGAATTTGAAGGTGATGCCACTACTACACCTTTCGAACATGGGT
CATCGGAGATTGATATCTATTTGTTGGAACCTAGTGTTAGGACTGGAGGTGATTTTGACATACTACAGTTGTGGAAGATGAACCGTGATCGATTCGAGGTTATAA
TTGGTCGTATGGGTAGAGATATTTTGGCTATTCTAGTTTCTATTGTAGCGTCCGAGTCGGCTTTTAGTACTCTGCTCATTGACTCCTACAACAATGGAGACTTTG
ACATGTACTCAAAATTGGCTAAATTCTGATCCAATAGATCTTCAAGTTCAACATGAATGGGGAGAGACTTCAAAATTTGAAGAATTTGGATGGAAAGTTACGGAA
TTAAGAGAGCTTTATTTGATAATATTTATGGATTTTCAACAAATTCGAGCCATTGAAACCATTTTTGTAGATTATCTTAGTGTATTGGCCTCTGTTCTTCACA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAAGCTGCTGTTAAGTTTGAAAAGGCTTTTGATAGATTAGAAGATGAAAATGCCTCTTATATACATGATATGTCACCAAATAAAAAAGATTGACAAATG
CTAGGATTAAACGTCTTTTTCATGAGTACAATAGTACTCGAGGTGGGAGTGGACCATGATGTAGTAGAACAACTAGTGCACAAACTGTTTCATGCTTGGATGTTA
ATATTGAATTTGATTCAAATGAAAATGTGGGTGAAGATTTTGTCTACGACACGATGGTTGAGGAATTTGAAGGTGATGCCACTACTACACCTTTCGAACATGGGT
CATCGGAGATTGATATCTATTTGTTGGAACCTAGTGTTAGGACTGGAGGTGATTTTGACATACTACAGTTGTGGAAGATGAACCGTGATCGATTCGAGGTTATAA
TTGGTCGTATGGGTAGAGATATTTTGGCTATTCTAGTTTCTATTGTAGCGTCCGAGTCGGCTTTTAGTACTCTGCTCATTGACTCCTACAACAATGGAGACTTTG
ACATGTACTCAAAATTGGCTAAATTCTGATCCAATAGATCTTCAAGTTCAACATGAATGGGGAGAGACTTCAAAATTTGAAGAATTTGGATGGAAAGTTACGGAA
TTAAGAGAGCTTTATTTGATAATATTTATGGATTTTCAACAAATTCGAGCCATTGAAACCATTTTTGTAGATTATCTTAGTGTATTGGCCTCTGTTCTTCACA
Protein sequenceShow/hide protein sequence
MLEAAVKFEKAFDRLEDENASYIHDMSPNKKDQMLGLNVFFMSTIVLEVGVDHDVVEQLVHKLFHAWMLILNLIQMKMWVKILSTTRWLRNLKVMPLLHLSNMGH
RRLISICWNLVLGLEVILTYYSCGRTVIDSRL*LVVWVEIFWLF*FLL*RPSRLLVLCSLTPTTMETLTCTQNWLNSDPIDLQVQHEWGETSKFEEFGWKVTELR
ELYLIIFMDFQQIRAIETIFVDYLSVLASVLHX