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Chy1G006830 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G006830
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH01:4950179..4954383
RNA-Seq ExpressionChy1G006830
SyntenyChy1G006830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572110.1 hypothetical protein SDJN03_28838, partial [Cucurbita argyrosperma subsp. sororia]9.70e-1250.56Show/hide
Query:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISK--KGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL
        MDCFLV CG   Q +RI+ D+N RK +K+ R D IV+ E P T K  K  +  RRV   ER+     +SRLQR+   RVE GGWLAA L
Subjt:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISK--KGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL

KAG6589009.1 hypothetical protein SDJN03_17574, partial [Cucurbita argyrosperma subsp. sororia]1.05e-0437.93Show/hide
Query:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISKKGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL
        M CF +KCG   QV RI+ D  ++K  + ++DD   + EAP  +   ++  +RV SKERK     ++ L+R    + E  GWLAA L
Subjt:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISKKGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL

KAG7011763.1 Ubiquitin-conjugating enzyme E2 28 [Cucurbita argyrosperma subsp. argyrosperma]1.00e-0445.57Show/hide
Query:  FNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISK--KGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL
        +   +RI+ D+N RK +K+ R D IV+ E P T K  K  +  RRV   ER+     +SRLQR+   RVE GGWLAA L
Subjt:  FNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISK--KGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL

KGN43248.1 hypothetical protein Csa_020351 [Cucumis sativus]1.80e-4388.51Show/hide
Query:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISKKGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL
        M+CFL KCG  NQVLRIRED +NRKERKIERDDDIVIGEAPKTMKIS+KGHRRVRSKERKM PSSS RLQRSQIERVELGGWLAA L
Subjt:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISKKGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL

TrEMBL top hitse value%identityAlignment
A0A0A0K1A5 Uncharacterized protein3.4e-3288.51Show/hide
Query:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISKKGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL
        M+CFL KCG  NQVLRIRED +NRKERKIERDDDIVIGEAPKTMKIS+KGHRRVRSKERKM P SSSRLQRSQIERVELGGWLAA L
Subjt:  MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISKKGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTTTCCTTGTCAAGTGTGGGGCATTCAACCAAGTGCTAAGAATTCGAGAAGATAGTAATAATAGAAAGGAAAGAAAAATAGAAAGAGATGATGATATTGTCAT
TGGCGAGGCACCAAAAACGATGAAGATCAGCAAGAAGGGGCATCGACGAGTGAGAAGTAAGGAGAGAAAGATGAGGCCGTCGTCGTCATCGAGGTTGCAACGATCACAAA
TAGAGAGAGTTGAGTTGGGTGGATGGCTTGCAGCATGTTTACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTTTCCTTGTCAAGTGTGGGGCATTCAACCAAGTGCTAAGAATTCGAGAAGATAGTAATAATAGAAAGGAAAGAAAAATAGAAAGAGATGATGATATTGTCAT
TGGCGAGGCACCAAAAACGATGAAGATCAGCAAGAAGGGGCATCGACGAGTGAGAAGTAAGGAGAGAAAGATGAGGCCGTCGTCGTCATCGAGGTTGCAACGATCACAAA
TAGAGAGAGTTGAGTTGGGTGGATGGCTTGCAGCATGTTTACCCTAA
Protein sequenceShow/hide protein sequence
MDCFLVKCGAFNQVLRIREDSNNRKERKIERDDDIVIGEAPKTMKISKKGHRRVRSKERKMRPSSSSRLQRSQIERVELGGWLAACLP