; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy1G010010 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G010010
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionFlocculation protein FLO11-like
Genome locationchrH01:10404623..10405198
RNA-Seq ExpressionChy1G010010
SyntenyChy1G010010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032272.1 uncharacterized protein E6C27_scaffold219G001100 [Cucumis melo var. makuwa]1.32e-0942.86Show/hide
Query:  IVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQPS
        +  +S S+ +DNVVL ++LKRKAS+   + K+  S   KKP V   SNA++LYE LFG  S  H+ +S   +  T+A +SS+P+
Subjt:  IVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQPS

KAA0033876.1 uncharacterized protein E6C27_scaffold43059G00610 [Cucumis melo var. makuwa]5.03e-0740.14Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSL-GSSKKTIVVDSNSTSED------------NVVLFDILKRK
        MS PS+S  PT K KR K+I A +P +RLR+ SE+P +S    S S+  +PS    CS   S +K  V+ SNS SE+            NVVL D+LK K
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSL-GSSKKTIVVDSNSTSED------------NVVLFDILKRK

Query:  ASTSLSLT--KKPNSVKGKKPF-----VSHPSNADKLYEALF
        A+T  S T  K P + K  KPF      + P ++D+  + LF
Subjt:  ASTSLSLT--KKPNSVKGKKPF-----VSHPSNADKLYEALF

KAA0036860.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.49e-1339.47Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNS
        MS PS S+  T KPKR K+I   NPLR    +   P  S   S+  +              S KT  +DSNS  ED+V+L ++LKRK +T  S +K+ + 
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNS

Query:  VKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQPSNLL
        VK K   V+ PS A +LYE LFGT  S HR +S R     FA  S +  + L
Subjt:  VKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQPSNLL

KAA0051667.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.24e-1341.42Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------
        M  PS+ + PT K KR K+I A +P  RLR  SEIP  SSS ESS S+H            K P          VI  SF  L S +K            
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------

Query:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTS
        TIVVDS S  EDNVVL  +LKRKA+      K     + KKP  + P+N ++LYE LFGT  S H   S
Subjt:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTS

TYJ97943.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.23e-1341.42Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------
        M  PS+ + PT K KR K+I A +P  RLR  SEIP  SSS ESS S+H            K P          VI  SF  L S +K            
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------

Query:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTS
        TIVVDS S  EDNVVL  +LKRKA+      K     + KKP  + P+N ++LYE LFGT  S H   S
Subjt:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTS

TrEMBL top hitse value%identityAlignment
A0A5A7SV86 Uncharacterized protein1.5e-0637.41Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVIS----------FCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKAST
        MS PS+S  PT K KR K+I A +P +RLR+ SE+P +S    S S+  +PS  S            S   S++ +  + +S  E NVVL D+LK KA+T
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVIS----------FCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKAST

Query:  SLSLT--KKPNSVKGKKPF-----VSHPSNADKLYEALF
          S T  K P + K  KPF      + P ++D+  + LF
Subjt:  SLSLT--KKPNSVKGKKPF-----VSHPSNADKLYEALF

A0A5A7UBA4 Flocculation protein FLO11-like1.4e-1239.89Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------
        M  PS+ + PT K KR K+I A +P  RLR  SEIP  SSS ESS S+H            K P          VI  SF  L S +K            
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------

Query:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQ
        TIVVDS S  EDNVVL  +LKRKA+      K     + KKP  + P+N ++LYE LFGT  S H   S     +   L SS+
Subjt:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQ

A0A5D3BAD6 Flocculation protein FLO11-like3.2e-1239.47Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNS
        MS PS S+  T KPKR K+I   NPLR    +   P  S   S+  +              S KT  +DSNS  ED+V+L ++LKRK +T  S +K+ + 
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNS

Query:  VKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQPSNLL
        VK K   V+ PS A +LYE LFGT  S HR +S R     FA  S +  + L
Subjt:  VKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQPSNLL

A0A5D3BFA1 Flocculation protein FLO11-like1.4e-1239.89Show/hide
Query:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------
        M  PS+ + PT K KR K+I A +P  RLR  SEIP  SSS ESS S+H            K P          VI  SF  L S +K            
Subjt:  MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIP-KSSSFESSHSMH------------KAP---------SVI--SFCSLGSSKK------------

Query:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQ
        TIVVDS S  EDNVVL  +LKRKA+      K     + KKP  + P+N ++LYE LFGT  S H   S     +   L SS+
Subjt:  TIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQ

A0A5D3D2R5 Uncharacterized protein6.3e-0836.8Show/hide
Query:  PLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGT
        PL+ L  +++    SS  ++ S  + P +I   S   S + +  +S S+ +DNVVL ++LKRKAS+   + K+  S   KKP V   SNA++LYE LFG 
Subjt:  PLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSHPSNADKLYEALFGT

Query:  HSSPHRTTSKRSITTTFALVSSQPS
         S  H+ +S   +  T+A +SS+P+
Subjt:  HSSPHRTTSKRSITTTFALVSSQPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAATCCATCGACTAGTTCTATACCCACTGGCAAACCTAAAAGGTTGAAGATAATTTCGGCTCACAATCCCTTGAGAAGACTGCGCAAAATTAGTGAGATTCCAAA
ATCTTCATCCTTCGAGTCTTCTCACTCTATGCATAAAGCTCCTTCGGTTATCTCTTTTTGTTCTCTTGGCTCTTCGAAAAAGACTATTGTTGTTGATTCCAACTCCACCA
GTGAAGACAATGTGGTCCTCTTTGATATTTTGAAGAGGAAAGCCTCTACCAGTTTATCTCTCACCAAGAAGCCAAATTCTGTAAAAGGTAAGAAACCTTTTGTCTCTCAT
CCCTCAAATGCCGATAAACTGTATGAAGCTTTGTTTGGCACTCATTCTTCACCTCATCGGACGACATCCAAACGTTCTATCACGACCACTTTTGCTCTTGTCTCATCCCA
GCCAAGCAATCTACTGATACCACGATTACCTGTTTACCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAATCCATCGACTAGTTCTATACCCACTGGCAAACCTAAAAGGTTGAAGATAATTTCGGCTCACAATCCCTTGAGAAGACTGCGCAAAATTAGTGAGATTCCAAA
ATCTTCATCCTTCGAGTCTTCTCACTCTATGCATAAAGCTCCTTCGGTTATCTCTTTTTGTTCTCTTGGCTCTTCGAAAAAGACTATTGTTGTTGATTCCAACTCCACCA
GTGAAGACAATGTGGTCCTCTTTGATATTTTGAAGAGGAAAGCCTCTACCAGTTTATCTCTCACCAAGAAGCCAAATTCTGTAAAAGGTAAGAAACCTTTTGTCTCTCAT
CCCTCAAATGCCGATAAACTGTATGAAGCTTTGTTTGGCACTCATTCTTCACCTCATCGGACGACATCCAAACGTTCTATCACGACCACTTTTGCTCTTGTCTCATCCCA
GCCAAGCAATCTACTGATACCACGATTACCTGTTTACCGAATTTGA
Protein sequenceShow/hide protein sequence
MSNPSTSSIPTGKPKRLKIISAHNPLRRLRKISEIPKSSSFESSHSMHKAPSVISFCSLGSSKKTIVVDSNSTSEDNVVLFDILKRKASTSLSLTKKPNSVKGKKPFVSH
PSNADKLYEALFGTHSSPHRTTSKRSITTTFALVSSQPSNLLIPRLPVYRI