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Chy1G010460 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G010460
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchrH01:11444474..11444974
RNA-Seq ExpressionChy1G010460
SyntenyChy1G010460
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042316.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]6.99e-3445.18Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP
        ASLF +++  SL YTPP ++ DKIVV PPEE                                                               ILSRGP
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP

Query:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        WHL  KPMLLRKWTPGIVP+SF+F+ +PVWIKLGRIP+ELWI+A LAVVAS +GKP +LDL TKE+
Subjt:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

TYK23423.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]3.13e-4169.9Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEEILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLAT
        ASLFG++S  SL YTPP ++ DK+VV PPEE++++G  HL  KPMLLRKWTPGIVP+SF F  VPVWIKLGRIPMELW +A LAVVAS +GKP +LDLA 
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEEILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLAT

Query:  KER
        KER
Subjt:  KER

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]2.09e-3346.39Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP
        ASLFG++S  SL+YT P  + DKIVVTPPEE                                                               ILSRGP
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP

Query:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        WHL  K MLLRKWTPGIVP+ FVF+ VPVWI+LG++PMELW +A LAVVAS +GKP SLDLATKER
Subjt:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

XP_031740405.1 uncharacterized protein LOC116403411 [Cucumis sativus]6.46e-3584.72Show/hide
Query:  ILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        ILSRGPWHL  KPMLLRKWTPGIVP+SFVFD VPVWIKLGRIP+ELW DA LAVVAS IGKP  +DLATKER
Subjt:  ILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

XP_031745056.1 uncharacterized protein LOC116405235 [Cucumis sativus]2.23e-3482.43Show/hide
Query:  EEILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        E ILS GPWHL  KPMLLRKWTPGIVP+SFVF+ VPVWIKLGRIP+ELW DA LAVVAS IGKP S+DLATKER
Subjt:  EEILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

TrEMBL top hitse value%identityAlignment
A0A1S3CJ11 uncharacterized protein LOC1035013952.7e-2846.39Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP
        ASLFG++S  SL+YT P  + DKIVVTPPEE                                                               ILSRGP
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP

Query:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        WHL  K MLLRKWTPGIVP+ FVF+ VPVWI+LG++PMELW +A LAVVAS +GKP SLDLATKER
Subjt:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

A0A5A7TK34 DUF4283 domain-containing protein4.6e-2845.18Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP
        ASLF +++  SL YTPP ++ DKIVV PPEE                                                               ILSRGP
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP

Query:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        WHL  KPMLLRKWTPGIVP+SF+F+ +PVWIKLGRIP+ELWI+A LAVVAS +GKP +LDL TKE+
Subjt:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

A0A5A7TWG5 Reverse transcriptase domain-containing protein7.8e-2845.78Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP
        ASLFG++S  SL+YT P  + DKIVVTPPE+                                                               ILSRGP
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP

Query:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        WHL  K MLLRKWTPGIVP+ FVF+ VPVWI+LG++PMELW +A LAVVAS +GKP SLDLATKER
Subjt:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

A0A5D3D5X6 Reverse transcriptase domain-containing protein2.7e-2846.39Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP
        ASLFG++S  SL+YT P  + DKIVVTPPEE                                                               ILSRGP
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEE---------------------------------------------------------------ILSRGP

Query:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER
        WHL  K MLLRKWTPGIVP+ FVF+ VPVWI+LG++PMELW +A LAVVAS +GKP SLDLATKER
Subjt:  WHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER

A0A5D3DIK9 DUF4283 domain-containing protein7.3e-3469.9Show/hide
Query:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEEILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLAT
        ASLFG++S  SL YTPP ++ DK+VV PPEE++++G  HL  KPMLLRKWTPGIVP+SF F  VPVWIKLGRIPMELW +A LAVVAS +GKP +LDLA 
Subjt:  ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEEILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLAT

Query:  KER
        KER
Subjt:  KER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTCCTTATTTGGATCGACAAGTGGAAATTCACTGATTTATACGCCTCCTACCTCCGTGAGGGATAAAATAGTAGTTACCCCTCCCGAAGAGATCCTATCCCGTGGACC
GTGGCATCTTAGGCGCAAACCTATGCTCCTCCGTAAATGGACTCCAGGTATTGTCCCTGATTCCTTTGTCTTTGATTATGTTCCTGTATGGATTAAATTAGGTAGGATCC
CAATGGAGTTATGGATAGATGCTAGATTGGCTGTTGTTGCTAGTGGTATAGGCAAACCTCAATCTTTAGATCTTGCTACTAAGGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
GCTTCCTTATTTGGATCGACAAGTGGAAATTCACTGATTTATACGCCTCCTACCTCCGTGAGGGATAAAATAGTAGTTACCCCTCCCGAAGAGATCCTATCCCGTGGACC
GTGGCATCTTAGGCGCAAACCTATGCTCCTCCGTAAATGGACTCCAGGTATTGTCCCTGATTCCTTTGTCTTTGATTATGTTCCTGTATGGATTAAATTAGGTAGGATCC
CAATGGAGTTATGGATAGATGCTAGATTGGCTGTTGTTGCTAGTGGTATAGGCAAACCTCAATCTTTAGATCTTGCTACTAAGGAAAGATGA
Protein sequenceShow/hide protein sequence
ASLFGSTSGNSLIYTPPTSVRDKIVVTPPEEILSRGPWHLRRKPMLLRKWTPGIVPDSFVFDYVPVWIKLGRIPMELWIDARLAVVASGIGKPQSLDLATKER