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Chy1G012100 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G012100
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptiondehydrogenase/reductase SDR family member 12
Genome locationchrH01:14347347..14356868
RNA-Seq ExpressionChy1G012100
SyntenyChy1G012100
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0050794 - regulation of cellular process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR036291 - NAD(P)-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043447.1 CDT1-like protein b [Cucumis melo var. makuwa]2.08e-3661.65Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLRFKGVASNFSNVCPKI+ALTDR                                    RF+YGHLAQFKFIL +AIVLKKV+VYDERT CMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        ISFNFG  ENQEDQYMQLRKLFR   R+ EF S
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

KAE8646176.1 hypothetical protein Csa_016825 [Cucumis sativus]4.08e-8355.44Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLRFKGVASNFSNVCPKI+ALTDR                     V LFS SEFDGYER+RF   HLAQFKFILP+AIVLKKVVVYDERTSCMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPSR----------------------------------------------------AFNGFGVYNGPYQL
        ISFNFG LEN+EDQYMQLRKLFR   R+ EF S                                                     +FN     N  +++
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPSR----------------------------------------------------AFNGFGVYNGPYQL

Query:  QNSPL-----LWQLQLSSFESTSPLDTRN----AWRLSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR
          S +       Q +       SP  +R     AWR+SAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR
Subjt:  QNSPL-----LWQLQLSSFESTSPLDTRN----AWRLSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR

KAG7011262.1 CDT1-like protein a, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.27e-3860.87Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLRFKGVASNFSNVCPKI+ LTDR     P+ +F               SDSE DG E RRFSYGHLAQ KFI+P+AI LKKV+++DERTSCMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQED-----QYMQLRKLFRDTFRICEFPS
        ISFNF  L+N+++     QYMQLRKLF+   R+ EF S
Subjt:  ISFNFGALENQED-----QYMQLRKLFRDTFRICEFPS

XP_008455861.1 PREDICTED: CDT1-like protein b [Cucumis melo]2.08e-3661.65Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLRFKGVASNFSNVCPKI+ALTDR                                    RF+YGHLAQFKFIL +AIVLKKV+VYDERT CMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        ISFNFG  ENQEDQYMQLRKLFR   R+ EF S
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

XP_031744901.1 CDT1-like protein a, chloroplastic isoform X2 [Cucumis sativus]6.93e-3782.56Show/hide
Query:  VSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        V LFS SEFDGYER+RF   HLAQFKFILP+AIVLKKVVVYDERTSCMKPDLHISFNFG LEN+EDQYMQLRKLFR   R+ EF S
Subjt:  VSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

TrEMBL top hitse value%identityAlignment
A0A1S3C211 CDT1-like protein b1.5e-3161.65Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLRFKGVASNFSNVCPKI+ALTD                                    RRF+YGHLAQFKFIL +AIVLKKV+VYDERT CMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        ISFNFG  ENQEDQYMQLRKLFR   R+ EF S
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

A0A1S3CEP6 CDT1-like protein b2.0e-3160.9Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLR KGVASNFSNVCPK++ALTD                                    RRFSYGHLAQFKFILP+AIVLKKVVVYDE+T CMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        ISFNF  LEN+EDQYMQLRKLFR   R+ EF S
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

A0A5A7TNU2 CDT1-like protein b1.5e-3161.65Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLRFKGVASNFSNVCPKI+ALTD                                    RRF+YGHLAQFKFIL +AIVLKKV+VYDERT CMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        ISFNFG  ENQEDQYMQLRKLFR   R+ EF S
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

A0A5D3BZJ0 CDT1-like protein b2.0e-3160.9Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLR KGVASNFSNVCPK++ALTD                                    RRFSYGHLAQFKFILP+AIVLKKVVVYDE+T CMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        ISFNF  LEN+EDQYMQLRKLFR   R+ EF S
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

A0A5D3DKW1 CDT1-like protein b1.5e-3161.65Show/hide
Query:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH
        M LLRFKGVASNFSNVCPKI+ALTD                                    RRF+YGHLAQFKFIL +AIVLKKV+VYDERT CMKPDLH
Subjt:  MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLH

Query:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS
        ISFNFG  ENQEDQYMQLRKLFR   R+ EF S
Subjt:  ISFNFGALENQEDQYMQLRKLFRDTFRICEFPS

SwissProt top hitse value%identityAlignment
A0PJE2 Dehydrogenase/reductase SDR family member 124.5e-0445.1Show/hide
Query:  GYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR
        G   +TKS +    K F P D++  I G+  +VTG NSGIG ATA  +A R
Subjt:  GYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR

A6QP05 Dehydrogenase/reductase SDR family member 121.8e-0541.67Show/hide
Query:  WRLSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR
        +R +A+   G   +TKS +   SK F P+D++  + G+  +VTG NSGIG ATA  +A R
Subjt:  WRLSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR

Q9M1S9 CDT1-like protein b3.4e-1235.48Show/hide
Query:  LLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHIS
        LL+ KG ++ ++N+CPKI+ LT+R                                     FSY HLAQ K I P+AI LK+V+ + E T CMKP LHI 
Subjt:  LLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHIS

Query:  FNFGALENQE----DQYMQLRKLF
         N  A+  ++     +YM+LRK+F
Subjt:  FNFGALENQE----DQYMQLRKLF

Q9SJW9 CDT1-like protein a, chloroplastic3.4e-1252.24Show/hide
Query:  RRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHISFNFGALE-----NQEDQYMQLRKLFR
        RRF Y HLAQ K ILP+AI +K+V+++DE T CMKPDLH++ N  A+E       E + + LRK+FR
Subjt:  RRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHISFNFGALE-----NQEDQYMQLRKLFR

Arabidopsis top hitse value%identityAlignment
AT2G31270.1 homolog of yeast CDT1 A2.4e-1352.24Show/hide
Query:  RRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHISFNFGALE-----NQEDQYMQLRKLFR
        RRF Y HLAQ K ILP+AI +K+V+++DE T CMKPDLH++ N  A+E       E + + LRK+FR
Subjt:  RRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHISFNFGALE-----NQEDQYMQLRKLFR

AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B2.4e-1335.48Show/hide
Query:  LLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHIS
        LL+ KG ++ ++N+CPKI+ LT+R                                     FSY HLAQ K I P+AI LK+V+ + E T CMKP LHI 
Subjt:  LLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHIS

Query:  FNFGALENQE----DQYMQLRKLF
         N  A+  ++     +YM+LRK+F
Subjt:  FNFGALENQE----DQYMQLRKLF

AT4G09750.1 NAD(P)-binding Rossmann-fold superfamily protein1.8e-2481.67Show/hide
Query:  WRLSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR
        WR +AFGVYGY+NFTKS F++HSKKFKPEDMQ  IEGKNC+VTGANSGIG+A AEGLASR
Subjt:  WRLSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTGTTGCGATTTAAAGGTGTTGCATCCAACTTCTCTAACGTTTGCCCTAAGATCAAAGCCCTCACTGATAGGTACTTGTTCTGCCATCCACATTGTCTT
TTCCTTTCTATCGATTTATATGTTGATAGTAGTGCAGTTTCTCTGTTTTCTGATTCTGAATTTGATGGCTATGAGCGCAGGAGGTTTTCATATGGTCATTTGGCT
CAATTCAAGTTTATTTTACCTAAAGCAATTGTTCTCAAGAAGGTTGTGGTCTATGATGAGAGGACCAGCTGTATGAAGCCAGATCTTCACATATCTTTCAATTTT
GGTGCTCTAGAGAATCAGGAGGACCAATATATGCAACTGAGGAAGTTGTTTCGGGATACTTTCAGAATTTGTGAGTTCCCATCGAGAGCTTTCAACGGTTTTGGA
GTCTACAATGGACCTTATCAACTCCAGAATTCCCCATTATTATGGCAGCTGCAACTCTCCAGCTTCGAATCCACATCTCCATTGGACACTCGCAATGCATGGAGA
CTATCAGCTTTTGGGGTCTATGGCTACCTCAACTTCACCAAATCTGCATTCATTGAACATTCTAAGAAGTTCAAACCAGAGGATATGCAAACGAACATTGAAGGG
AAAAATTGCATTGTTACTGGGGCGAATTCCGGGATTGGATATGCAACTGCAGAGGGTTTAGCATCACGGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTGTTGCGATTTAAAGGTGTTGCATCCAACTTCTCTAACGTTTGCCCTAAGATCAAAGCCCTCACTGATAGGTACTTGTTCTGCCATCCACATTGTCTT
TTCCTTTCTATCGATTTATATGTTGATAGTAGTGCAGTTTCTCTGTTTTCTGATTCTGAATTTGATGGCTATGAGCGCAGGAGGTTTTCATATGGTCATTTGGCT
CAATTCAAGTTTATTTTACCTAAAGCAATTGTTCTCAAGAAGGTTGTGGTCTATGATGAGAGGACCAGCTGTATGAAGCCAGATCTTCACATATCTTTCAATTTT
GGTGCTCTAGAGAATCAGGAGGACCAATATATGCAACTGAGGAAGTTGTTTCGGGATACTTTCAGAATTTGTGAGTTCCCATCGAGAGCTTTCAACGGTTTTGGA
GTCTACAATGGACCTTATCAACTCCAGAATTCCCCATTATTATGGCAGCTGCAACTCTCCAGCTTCGAATCCACATCTCCATTGGACACTCGCAATGCATGGAGA
CTATCAGCTTTTGGGGTCTATGGCTACCTCAACTTCACCAAATCTGCATTCATTGAACATTCTAAGAAGTTCAAACCAGAGGATATGCAAACGAACATTGAAGGG
AAAAATTGCATTGTTACTGGGGCGAATTCCGGGATTGGATATGCAACTGCAGAGGGTTTAGCATCACGGTCTTGA
Protein sequenceShow/hide protein sequence
MWLLRFKGVASNFSNVCPKIKALTDRYLFCHPHCLFLSIDLYVDSSAVSLFSDSEFDGYERRRFSYGHLAQFKFILPKAIVLKKVVVYDERTSCMKPDLHISFNF
GALENQEDQYMQLRKLFRDTFRICEFPSRAFNGFGVYNGPYQLQNSPLLWQLQLSSFESTSPLDTRNAWRLSAFGVYGYLNFTKSAFIEHSKKFKPEDMQTNIEG
KNCIVTGANSGIGYATAEGLASRS