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Chy1G012500 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G012500
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchrH01:15475159..15475350
RNA-Seq ExpressionChy1G012500
SyntenyChy1G012500
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051758.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.88e-2175Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQH LAE R   VDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
KAA0054632.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.32e-2075Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQSQ NKAARQKQPY HSSGSKSFLQRQ+ LAE++  SVDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
KAA0062623.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.16e-2073.33Show/hide
Query:  MNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        MNKAARQKQPY HSSGSKSFLQRQ+ LAE +  SVDR+ELF ETH R+G F+S AA D H
Subjt:  MNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
TYK19813.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]7.86e-2275Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQH LAE R   VDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
TYK22595.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.50e-2073.44Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQ+ LAE R   VDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
TrEMBL top hitse value%identityAlignment
A0A5A7T4P0 CACTA en-spm transposon protein4.2e-1675Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQH LAE R   VDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
A0A5D3C6Z8 CACTA en-spm transposon protein4.2e-1675Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQH LAE R   VDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
A0A5D3DB16 CACTA en-spm transposon protein4.2e-1675Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQH LAE R   VDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
A0A5D3DZR1 CACTA en-spm transposon protein1.5e-1676.56Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQH LAE R  SVDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
A0A5D3E080 CACTA en-spm transposon protein4.2e-1675Show/hide
Query:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
        EQS+ NKAARQKQPY HSSGSKSFLQRQH LAE R   VDR+ELFRETH R+G F+S AA D H
Subjt:  EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCAATCACAGATGAACAAGGCTGCTAGGCAGAAGCAGCCTTACTGTCATAGTAGTGGGTCGAAGTCGTTTCTACAACGACAACATGGGCTTGCTGAAGAACGAAGTAT
ATCAGTCGACCGACTTGAATTATTCAGAGAAACCCACGCTCGGAGTGGAGAATTCATTTCGCCTGCAGCTGTGGATCCGCAT
mRNA sequenceShow/hide mRNA sequence
GAGCAATCACAGATGAACAAGGCTGCTAGGCAGAAGCAGCCTTACTGTCATAGTAGTGGGTCGAAGTCGTTTCTACAACGACAACATGGGCTTGCTGAAGAACGAAGTAT
ATCAGTCGACCGACTTGAATTATTCAGAGAAACCCACGCTCGGAGTGGAGAATTCATTTCGCCTGCAGCTGTGGATCCGCAT
Protein sequenceShow/hide protein sequence
EQSQMNKAARQKQPYCHSSGSKSFLQRQHGLAEERSISVDRLELFRETHARSGEFISPAAVDPH