; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy1G014830 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G014830
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionFanconi anemia group D2 protein
Genome locationchrH01:20564692..20569177
RNA-Seq ExpressionChy1G014830
SyntenyChy1G014830
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44712.1 hypothetical protein Csa_016169 [Cucumis sativus]1.02e-7395.61Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGATVDKNHVNVLGSIAYVLVICRWPMTDCWW
        MLRTRLFWFS GFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNS+SSAEGATVDKNHVNVLGS+AYVLV+CRWPMTDCWW
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGATVDKNHVNVLGSIAYVLVICRWPMTDCWW

Query:  SSLFSLANRREAIS
        SSLFSLA+RREAIS
Subjt:  SSLFSLANRREAIS

XP_004148945.1 uncharacterized protein LOC101218167 [Cucumis sativus]2.71e-3392.75Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE
        MLRTRLFWFS GFATTAASISHFVWRDLLAYRCALSSD   MERSFDALEARISNLESARNRNS+SSAE
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE

XP_008447209.1 PREDICTED: uncharacterized protein LOC103489712 isoform X1 [Cucumis melo]7.62e-2885.51Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE
        MLRTRLFWFS GFATTAASIS FVWRDLLA+R AL SD   MER+FDALEARISNLES RNRNSISSAE
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE

XP_008447214.1 PREDICTED: uncharacterized protein LOC103489712 isoform X2 [Cucumis melo]2.95e-2884.51Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGA
        MLRTRLFWFS GFATTAASIS FVWRDLLA+R AL SD   MER+FDALEARISNLES RNRNSISSAE A
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGA

XP_008447216.1 PREDICTED: uncharacterized protein LOC103489712 isoform X3 [Cucumis melo]5.78e-2885.51Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE
        MLRTRLFWFS GFATTAASIS FVWRDLLA+R AL SD   MER+FDALEARISNLES RNRNSISSAE
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE

TrEMBL top hitse value%identityAlignment
A0A0A0K8L3 Uncharacterized protein6.3e-5595.61Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGATVDKNHVNVLGSIAYVLVICRWPMTDCWW
        MLRTRLFWFS GFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNS+SSAEGATVDKNHVNVLGS+AYVLV+CRWPMTDCWW
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGATVDKNHVNVLGSIAYVLVICRWPMTDCWW

Query:  SSLFSLANRREAIS
        SSLFSLA+RREAIS
Subjt:  SSLFSLANRREAIS

A0A1S3BGW3 uncharacterized protein LOC103489712 isoform X18.7e-2085.51Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE
        MLRTRLFWFS GFATTAASIS FVWRDLLA+R AL SD   MER+FDALEARISNLES RNRNSISSAE
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE

A0A1S3BGX2 uncharacterized protein LOC103489712 isoform X25.1e-2084.51Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGA
        MLRTRLFWFS GFATTAASIS FVWRDLLA+R AL SD   MER+FDALEARISNLES RNRNSISSAE A
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGA

A0A1S3BHI8 uncharacterized protein LOC103489712 isoform X38.7e-2085.51Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE
        MLRTRLFWFS GFATTAASIS FVWRDLLA+R AL SD   MER+FDALEARISNLES RNRNSISSAE
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAE

A0A6J1JNH5 uncharacterized protein LOC111488481 isoform X11.9e-1977.03Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGATVD
        MLRTRLFWFS GFA T+ASIS FVWRDLLA+RCALSSD   +ER+FDALEARISNLES RNR+SI SAE A  +
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGATVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07568.1 unknown protein1.5e-1157.14Show/hide
Query:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRN
        MLRTRL WF+ GF+ T  SI+H VWRDL A R A+SSD   M+  F ALE R+S LES    N
Subjt:  MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGAACTCGATTGTTTTGGTTCAGTTTTGGATTCGCGACCACAGCTGCTTCCATTTCCCATTTCGTTTGGAGAGATCTATTGGCTTATCGATGTGCTCTTTCATC
TGATGCAAGTTTTATGGAGCGGAGTTTTGATGCCCTGGAAGCTAGAATCTCGAATCTCGAGTCCGCTCGAAACCGGAATTCGATTTCATCTGCTGAGGGTGCTACTGTTG
ATAAGAATCATGTTAATGTCCTTGGCTCCATTGCTTATGTTCTTGTTATATGTCGATGGCCAATGACTGATTGTTGGTGGAGCTCGTTATTTAGTTTAGCAAACAGAAGG
GAGGCAATCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGAACTCGATTGTTTTGGTTCAGTTTTGGATTCGCGACCACAGCTGCTTCCATTTCCCATTTCGTTTGGAGAGATCTATTGGCTTATCGATGTGCTCTTTCATC
TGATGCAAGTTTTATGGAGCGGAGTTTTGATGCCCTGGAAGCTAGAATCTCGAATCTCGAGTCCGCTCGAAACCGGAATTCGATTTCATCTGCTGAGGGTGCTACTGTTG
ATAAGAATCATGTTAATGTCCTTGGCTCCATTGCTTATGTTCTTGTTATATGTCGATGGCCAATGACTGATTGTTGGTGGAGCTCGTTATTTAGTTTAGCAAACAGAAGG
GAGGCAATCTCATGA
Protein sequenceShow/hide protein sequence
MLRTRLFWFSFGFATTAASISHFVWRDLLAYRCALSSDASFMERSFDALEARISNLESARNRNSISSAEGATVDKNHVNVLGSIAYVLVICRWPMTDCWWSSLFSLANRR
EAIS