; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy1G017480 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G017480
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMultidrug resistance protein ABC transporter family protein, putative
Genome locationchrH01:23223287..23224102
RNA-Seq ExpressionChy1G017480
SyntenyChy1G017480
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046688.1 putative Multidrug resistance protein ABC transporter family protein [Cucumis melo var. makuwa]1.17e-10584.34Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKST---VVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANS
        MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISK     ++ K             NKVYMMLPIRGGKPASLSSEDIRRVLLCANS
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKST---VVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANS

Query:  ALRSRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        ALRSRSLLLSSSKV+PWFARACTATTT  +TTTREYRA+IKKELDVVKMEGEEV WET EGRP+YLSRQLSGRGWKPSLDTIKEKK EKKLSHWLF F
Subjt:  ALRSRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

XP_004135994.1 uncharacterized protein LOC101221516 [Cucumis sativus]6.16e-13097.95Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PWFARACTATTTT STTTREYRAD KKELDVVKMEGEEVEWETVEGRP+YLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

XP_008451489.1 PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo]1.62e-12594.87Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PWFARACTATTT  +TTTREYRA+IKKELDVVKMEGEEV WET EGRP+YLSRQLSGRGWKPSLDTIKEKK EKKLSHWLF F
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

XP_023549016.1 uncharacterized protein LOC111807502 [Cucurbita pepo subsp. pepo]7.46e-9176.5Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVTSV SGVGKVVLSNGSI EFNEP TVAELMLEHPR VVVE+  STV  KRPTPLPAD KL+  KVYMMLPIRGGKP SLSSE+IRRVLLCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET-----VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PW ARA        STTTR    D+KKE D   + GEE+ WET      EGRP+YLSRQLSG+ WKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET-----VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

XP_038899617.1 uncharacterized protein LOC120086875 [Benincasa hispida]1.73e-9980.3Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVT  VSG+G+VVLS+GSIQ+FNEPFT AELMLEHPRQVVVEI KST++ KR TPLPADEKL+S KVYMMLPIRGGKPASLSSE+IRRVLLCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET---VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PWFARA T+ T T   TTRE + +IKKE D+VK+EGEE  WET    EGRP+YLSRQLSGRGWKPSLDTIKEKKFEKK SHWLF F
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET---VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

TrEMBL top hitse value%identityAlignment
A0A0A0K6C6 Uncharacterized protein8.5e-10097.95Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PWFARACTATTTT STTTREYRAD KKELDVVKMEGEEVEWETVEGRP+YLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

A0A1S3BSP6 uncharacterized protein LOC1034927631.9e-9694.87Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PWFARACTATTT  +TTTREYRA+IKKELDVVKMEGEEV WET EGRP+YLSRQLSGRGWKPSLDTIKEKK EKKLSHWLF F
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

A0A5D3D3I3 Putative Multidrug resistance protein ABC transporter family protein2.3e-8184.34Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKS---TVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANS
        MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISK     ++ K             NKVYMMLPIRGGKPASLSSEDIRRVLLCANS
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKS---TVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANS

Query:  ALRSRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        ALRSRSLLLSSSKV+PWFARACTATTT  +TTTREYRA+IKKELDVVKMEGEEV WET EGRP+YLSRQLSGRGWKPSLDTIKEKK EKKLSHWLF F
Subjt:  ALRSRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

A0A6J1GN59 uncharacterized protein LOC1114559741.0e-6874.5Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVTS VSGVGK+VLS+GSI EFNEP TVAELMLEHPR VVVE+  S V  KRPTPLPAD KL+  KVYMMLPIRGGKP SLSSE+IRRV+LCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET-----VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PW ARA +ATT    TTT     D+KK+   + M GEE+ WET      EGRP+YLSRQLSG+ WKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET-----VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

A0A6J1JQZ4 uncharacterized protein LOC1114881134.2e-6774Show/hide
Query:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR
        MGNVTS VSGVGKVVLS+GSI EFNEP TVAELMLEHPR VVVE+  STV  KRPTPLPAD KL+  KVYMMLPIRGGKP SLSSE+IR VLLCANSALR
Subjt:  MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALR

Query:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET-----VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKV+PW ARA +ATT  +         D+KK+ D   + GEE+ WET      EGRP+YLSRQLSG+ WKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  SRSLLLSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWET-----VEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02090.1 unknown protein5.5e-2738.6Show/hide
Query:  MGNVT------SVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTV--------VGKRPTPLPADEKLNSNKVYMMLPIR--GGKPAS--
        MGNV       +     GKVVLS+G +Q   E  TVAE+MLE+P+ VVVE   S++        V ++  PLPAD+ L   K+Y++LP +  GG+ A   
Subjt:  MGNVT------SVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTV--------VGKRPTPLPADEKLNSNKVYMMLPIR--GGKPAS--

Query:  ---LSSEDIRRVLLCANSALRSRSLLLSSSKVIPWFARACTATTTTLSTTTREYRAD------IKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWK
           L+SE++R++L  A + +RS         ++PWF             TTR Y+ +      +     V ++E E  E    E RP++LSRQLSGRGWK
Subjt:  ---LSSEDIRRVLLCANSALRSRSLLLSSSKVIPWFARACTATTTTLSTTTREYRAD------IKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWK

Query:  PSLDTIKEKKFEKKL
        PSLD I+EKK +KK+
Subjt:  PSLDTIKEKKFEKKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACGTCACCTCCGTCGTCTCCGGTGTCGGGAAAGTTGTTCTCTCTAATGGTTCCATTCAAGAATTCAATGAGCCGTTCACAGTGGCTGAGTTGATGCTT
GAACATCCACGTCAAGTTGTCGTCGAGATTTCCAAGAGTACCGTCGTAGGAAAACGACCCACTCCGTTGCCAGCCGATGAAAAACTCAACTCGAACAAGGTTTAT
ATGATGCTACCCATAAGAGGAGGCAAGCCAGCATCATTGTCATCGGAAGATATCCGTCGTGTTCTTCTATGTGCGAACTCAGCTTTACGGTCGCGCTCTCTCCTC
CTTTCATCTTCTAAAGTTATCCCTTGGTTTGCGAGGGCATGCACGGCAACGACGACAACGTTGTCGACAACAACGAGAGAGTACCGAGCAGATATTAAAAAGGAA
TTAGATGTTGTGAAGATGGAAGGAGAGGAAGTTGAATGGGAAACGGTGGAGGGGAGGCCAGATTATTTGAGCAGACAGTTATCGGGCAGAGGTTGGAAGCCAAGT
TTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAACTTTCTCATTGGTTGTTCAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACGTCACCTCCGTCGTCTCCGGTGTCGGGAAAGTTGTTCTCTCTAATGGTTCCATTCAAGAATTCAATGAGCCGTTCACAGTGGCTGAGTTGATGCTT
GAACATCCACGTCAAGTTGTCGTCGAGATTTCCAAGAGTACCGTCGTAGGAAAACGACCCACTCCGTTGCCAGCCGATGAAAAACTCAACTCGAACAAGGTTTAT
ATGATGCTACCCATAAGAGGAGGCAAGCCAGCATCATTGTCATCGGAAGATATCCGTCGTGTTCTTCTATGTGCGAACTCAGCTTTACGGTCGCGCTCTCTCCTC
CTTTCATCTTCTAAAGTTATCCCTTGGTTTGCGAGGGCATGCACGGCAACGACGACAACGTTGTCGACAACAACGAGAGAGTACCGAGCAGATATTAAAAAGGAA
TTAGATGTTGTGAAGATGGAAGGAGAGGAAGTTGAATGGGAAACGGTGGAGGGGAGGCCAGATTATTTGAGCAGACAGTTATCGGGCAGAGGTTGGAAGCCAAGT
TTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAACTTTCTCATTGGTTGTTCAAATTTTGA
Protein sequenceShow/hide protein sequence
MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLL
LSSSKVIPWFARACTATTTTLSTTTREYRADIKKELDVVKMEGEEVEWETVEGRPDYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF