; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy1G017680 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy1G017680
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTranscription factor UPBEAT1
Genome locationchrH01:23344354..23345280
RNA-Seq ExpressionChy1G017680
SyntenyChy1G017680
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]2.60e-7785.8Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEE----EVQEINSKGKDDKSTCN-INTRRTTRRRSRSNSVILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQDRII+IKEIRN++SNDQSIWKK SMKEE    E QEINSKGKD KSTCN INTRRTTRRRSRSNS+ILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEE----EVQEINSKGKDDKSTCN-INTRRTTRRRSRSNSVILKKRSRRSSSS

Query:  SS---RIVQRVNTLRSLVPNNDNHNHNHDDDESCV-GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SS   RI QRVN LR+LVPNNDNH    DDDESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SS---RIVQRVNTLRSLVPNNDNHNHNHDDDESCV-GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]5.03e-2251.52Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSSRIV
        MG    TLL +QLNME+   TQD II           + SI KK+SM+EE+        K++KS           RR R  S  L K++RRSS+   RIV
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSSRIV

Query:  QRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI
        QRV TLR+LVPN +N N N ++D    GSLEQLFT TADYILSLQTRVR M+TLVDVLS  SS I
Subjt:  QRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI
KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]5.04e-2449.08Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSSRIV
        MGV  ETLL +QLNM++   +QD   + ++             +   +++E QE  +K                RRR  SNS++ K+RSR    SS+RI 
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSSRIV

Query:  QRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
        QRV+TLR+LVPN +N+N+NH   ESCVGSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  QRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]8.59e-2449.08Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSSRIV
        MGV  ETLL +QLNM++   +QD                      SM+E++ ++  +  K              RRR  SNS++ K+RSR    SS+RI 
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSSRIV

Query:  QRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
        QRV+TLR+LVPN +N+N+NH   ESCVGSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  QRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]6.02e-9295.24Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSS-RI
        MGVSQETLLQIQLNMEDHQTTQDRII IKEIRNNNSNDQS WKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNS+ILKKRSRRSSSSSS RI
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRRSSSSSS-RI

Query:  VQRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
         QRVNTLRSLVPNNDNHNH+ D DESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  VQRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein3.1e-7295.24Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRR-SSSSSSRI
        MGVSQETLLQIQLNMEDHQTTQDRII IKEIRNNNSNDQS WKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNS+ILKKRSRR SSSSSSRI
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNINTRRTTRRRSRSNSVILKKRSRR-SSSSSSRI

Query:  VQRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
         QRVNTLRSLVPNNDNHNH+ D DESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  VQRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
A0A5A7TXU1 Transcription factor UPBEAT15.5e-6185.8Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMK----EEEVQEINSKGKDDKSTC-NINTRRTTRRRSRSNSVILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQDRII+IKEIRN++SNDQSIWKK SMK    EEE QEINSKGK DKSTC NINTRRTTRRRSRSNS+ILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMK----EEEVQEINSKGKDDKSTC-NINTRRTTRRRSRSNSVILKKRSRRSSSS

Query:  S---SRIVQRVNTLRSLVPNNDNHNHNHDDDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        S   SRI QRVN LR+LVPNNDNH    DDDESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  S---SRIVQRVNTLRSLVPNNDNHNHNHDDDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators7.2e-0539.13Show/hide
Query:  RRSRSNSVILKK---RSRRSSSSSSR----IVQRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSD
        RR R+   ++KK   R R+S  +S R    I +RV TL+ LVPN                 L+ LF QTADYIL+L+ +V++M+T+V VL++
Subjt:  RRSRSNSVILKK---RSRRSSSSSSR----IVQRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCATCCAAAATCTCAATCCCAAACCCCATTTTCCCCTCTCTCTCTCTCTCTCTATTTCTCTAGTTTCTTCACCACAAGTGAAAAAGAAAAGAAAACCACAAAAC
CAAATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAGGATCATCAAACAACACAAGATCGTATCATCGTCATCAAAGAGATCAGGAACAAC
AACTCAAATGATCAATCCATATGGAAGAAAAATTCAATGAAAGAAGAAGAAGTTCAAGAAATTAATAGCAAAGGCAAAGACGACAAAAGTACTTGCAATATTAAT
ACAAGAAGAACAACAAGAAGAAGATCAAGAAGCAATTCCGTGATATTGAAGAAGAGATCAAGAAGATCATCATCATCATCAAGTAGAATAGTGCAAAGGGTCAAC
ACTTTGAGAAGCCTTGTACCAAACAATGACAACCACAACCACAACCACGACGACGATGAAAGCTGTGTCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGAT
TACATACTGTCATTACAAACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGAGAGAATTTGAAAGAAAAA
AAAAAAGTTTCATTTTATTTTTTGTTTTTATATATATATTTGTGTTTAATTTGTGTAAAACTTATATCATTATCTCTCTTCTGTAAAGATTGATATATGTGATTT
TATATATATCATTCTTTTGCTTTTCTTTCTTTTTGATTCTTTTTCTCTTACTTTTGCTTTATTGATCATCTGTCTTTGAAATGTCTCTGTAGTTTTAGAGAGAGA
GATTTAACTTTGATTTTTTCTTCTTCTTTTGGTGTGTGGAAAAGATTTGACTTTTGATTATAAGAAGTTATTTAGGGATATTGGGGT
mRNA sequenceShow/hide mRNA sequence
TTCATCCAAAATCTCAATCCCAAACCCCATTTTCCCCTCTCTCTCTCTCTCTCTATTTCTCTAGTTTCTTCACCACAAGTGAAAAAGAAAAGAAAACCACAAAAC
CAAATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAGGATCATCAAACAACACAAGATCGTATCATCGTCATCAAAGAGATCAGGAACAAC
AACTCAAATGATCAATCCATATGGAAGAAAAATTCAATGAAAGAAGAAGAAGTTCAAGAAATTAATAGCAAAGGCAAAGACGACAAAAGTACTTGCAATATTAAT
ACAAGAAGAACAACAAGAAGAAGATCAAGAAGCAATTCCGTGATATTGAAGAAGAGATCAAGAAGATCATCATCATCATCAAGTAGAATAGTGCAAAGGGTCAAC
ACTTTGAGAAGCCTTGTACCAAACAATGACAACCACAACCACAACCACGACGACGATGAAAGCTGTGTCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGAT
TACATACTGTCATTACAAACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGAGAGAATTTGAAAGAAAAA
AAAAAAGTTTCATTTTATTTTTTGTTTTTATATATATATTTGTGTTTAATTTGTGTAAAACTTATATCATTATCTCTCTTCTGTAAAGATTGATATATGTGATTT
TATATATATCATTCTTTTGCTTTTCTTTCTTTTTGATTCTTTTTCTCTTACTTTTGCTTTATTGATCATCTGTCTTTGAAATGTCTCTGTAGTTTTAGAGAGAGA
GATTTAACTTTGATTTTTTCTTCTTCTTTTGGTGTGTGGAAAAGATTTGACTTTTGATTATAAGAAGTTATTTAGGGATATTGGGGT
Protein sequenceShow/hide protein sequence
FIQNLNPKPHFPLSLSLSISLVSSPQVKKKRKPQNQMGVSQETLLQIQLNMEDHQTTQDRIIVIKEIRNNNSNDQSIWKKNSMKEEEVQEINSKGKDDKSTCNIN
TRRTTRRRSRSNSVILKKRSRRSSSSSSRIVQRVNTLRSLVPNNDNHNHNHDDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDEENLKEKK
KVSFYFLFLYIYLCLICVKLISLSLFCKDYM*FYIYHSFAFLSF*FFFSYFCFIDHLSLKCLCSFRERDLTLIFSSSFGVWKRFDF*LEVI*GYWG