CuGenDBv2

Gene ID	Chy1G018190
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Genome location	chrH01:23713814..23715284
RNA-Seq Expression	Chy1G018190
Synteny	Chy1G018190
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR040411 - Uncharacterized protein At5g23160-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008461362.1 PREDICTED: uncharacterized protein At5g23160 [Cucumis melo]

1.17e-78

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Query:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +DQSQSRFSLTKKLESFR +RFTQTASPKKN KSTNLQ P ISHSLSFPPPKPAPLN+VSEP  SK  GS   NRKSSQ+YRS  AMSVLMMTLAMMV+W
Subjt:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG
        GRICAILCTA WIF+VTSLRSIVEEY+RIDFVESDSYSEGFKKKLVVLKG
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG

XP_011659425.1 uncharacterized protein LOC105436182 isoform X1 [Cucumis sativus]

5.64e-79

88.67

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Query:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +DQSQSRFSLTK+LESFRSIRF QTA PKKNTKS N+QTP ISHSLSFPPPKP P NRVSE  ESK V SK +NRKSSQQYRSVAAMSVLMMTLAMMVVW
Subjt:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG
        GRICAILCTA WIFIVTSLRSIVEEYE IDFVESDSYSEGFKKKLVVLKG
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG

XP_022954035.1 uncharacterized protein LOC111456417 [Cucurbita moschata]

5.19e-49

63.33

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Query:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +S+SRFSLT+KLESFRS RF Q ASP  KKN KST+L +P IS      PP+   +N+V EPL S  VG KP N ++ Q+Y+S+A MS+LM+TL +MV W
Subjt:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG
        GR+CAILCTA WI +VTSLRSI+E+Y+ + F ESDSYSEGFKKKLVVLKG
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG

XP_023549176.1 uncharacterized protein LOC111807611 [Cucurbita pepo subsp. pepo]

2.71e-51

65.13

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Query:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +S+SRFSLT+KLESFRS RF Q ASP  KKN KSTNLQ+P IS +    PP+   +N+V EPL S  +G KP N ++ Q+Y+S+A MS+LM+TL +MVVW
Subjt:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL
        GR+CAILCTA WI +VTSLRSIVE+Y+ + F ESDSYSEGFKKKLVVLKG L
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL

XP_038897219.1 uncharacterized protein LOC120085350 isoform X1 [Benincasa hispida]

3.01e-68

79.47

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Query:  DQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVWG
        DQSQSRFSLTKKLESFRS+RFTQ ASPKKN KSTNL+TP ISHSLSFPPP PA  NR +E   SK  G K +N ++SQ+YRS AA+SVLMMTLAMMV+WG
Subjt:  DQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVWG

Query:  RICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL
        RICAILCTA WIFIVTSLR+IVEE + IDFVESDSYSEGFKKKLVVLKG L
Subjt:  RICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6H3 Uncharacterized protein

3.7e-61

88.67

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Query:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +DQSQSRFSLTK+LESFRSIRF QTA PKKNTKS N+QTP ISHSLSFPPPKP P NRVSE  ESK V SK +NRKSSQQYRSVAAMSVLMMTLAMMVVW
Subjt:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG
        GRICAILCTA WIFIVTSLRSIVEEYE IDFVESDSYSEGFKKKLVVLKG
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG

A0A1S3CFR9 uncharacterized protein At5g23160

6.2e-61

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Query:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +DQSQSRFSLTKKLESFR +RFTQTASPKKN KSTNLQ P ISHSLSFPPPKPAPLN+VSEP  SK  GS   NRKSSQ+YRS  AMSVLMMTLAMMV+W
Subjt:  MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG
        GRICAILCTA WIF+VTSLRSIVEEY+RIDFVESDSYSEGFKKKLVVLKG
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG

A0A6J1DHG8 uncharacterized protein LOC111020508

1.2e-27

54.61

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Query:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +SQ+RFSLT++LESFRS RFT+  SP  +K+  +TN   P IS SLSFP   P    +V  P  S  VG      + S++YRS AA+S+ ++TL++M++W
Subjt:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL
        GR+CAIL TA WI IV SL SIVEE +  DF+ SDSYSEG KKKLV+LKG L
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL

A0A6J1GRB9 uncharacterized protein LOC111456417

3.3e-38

62.67

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Query:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +S+SRFSLT+KLESFRS RF Q ASP  KKN KST+L +P    ++S  PP+   +N+V EPL S  VG KP N ++ Q+Y+S+A MS+LM+TL +MV W
Subjt:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG
        GR+CAILCTA WI +VTSLRSI+E+Y+ + F ESDSYSEGFKKKLVVLKG
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKG

A0A6J1JV00 uncharacterized protein LOC111488090

8.2e-37

61.84

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Query:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW
        +S+SRFS T+KLESFRS RF Q  SP  KKN KSTNLQ+P IS +L    P+   +N+V E + S  V  KP N +  Q+YRS+A MS+LM+TL +M+VW
Subjt:  QSQSRFSLTKKLESFRSIRFTQTASP--KKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVW

Query:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL
        GR+CAILCTA WI +VTSLRSIVE+Y+ + F +SDSYSEGFKKKLVVLKG L
Subjt:  GRICAILCTALWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNL

SwissProt top hits

e value

%identity

Alignment

Q9FMY4 Uncharacterized protein At5g23160

6.8e-04

29.41

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Query:  DQSQSRFSLTKKLESFRSIRFT--QTASPKKNTKSTNLQTPIISHSLSF------------PPPKPAPLNRV---SEPLESKHVGSKPRNRKSSQQYRSV
        D  Q+ F + + +   +++  +  +T   +   K TN Q  I    LSF               K  P N V   S+P E +   S+ R R    +   V
Subjt:  DQSQSRFSLTKKLESFRSIRFT--QTASPKKNTKSTNLQTPIISHSLSF------------PPPKPAPLNRV---SEPLESKHVGSKPRNRKSSQQYRSV

Query:  AAMSVLMMTLAMMVVWGRICAILCTALWIFIVTSLR
          +S++M+TL +M+ WGR+CAILCT+ W +I   L+
Subjt:  AAMSVLMMTLAMMVVWGRICAILCTALWIFIVTSLR

Arabidopsis top hits

e value

%identity

Alignment

AT5G08240.1 unknown protein

1.3e-05

30.86

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Query:  SKPRNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTALWIFIVTSLR---SIVEEYERIDFVESDSYSEGFKKKLVV
        ++ RN    + +  V  +S++++TL +M+VWGR+CAILCT+ W +++  +R   ++ +          D  SE +K+K+V+
Subjt:  SKPRNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTALWIFIVTSLR---SIVEEYERIDFVESDSYSEGFKKKLVV

AT5G23160.1 unknown protein

4.8e-05

29.41

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Query:  DQSQSRFSLTKKLESFRSIRFT--QTASPKKNTKSTNLQTPIISHSLSF------------PPPKPAPLNRV---SEPLESKHVGSKPRNRKSSQQYRSV
        D  Q+ F + + +   +++  +  +T   +   K TN Q  I    LSF               K  P N V   S+P E +   S+ R R    +   V
Subjt:  DQSQSRFSLTKKLESFRSIRFT--QTASPKKNTKSTNLQTPIISHSLSF------------PPPKPAPLNRV---SEPLESKHVGSKPRNRKSSQQYRSV

Query:  AAMSVLMMTLAMMVVWGRICAILCTALWIFIVTSLR
          +S++M+TL +M+ WGR+CAILCT+ W +I   L+
Subjt:  AAMSVLMMTLAMMVVWGRICAILCTALWIFIVTSLR

Sequences

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CDS sequence

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ATGGATCAAAGTCAATCAAGGTTCTCATTAACCAAAAAACTCGAGTCGTTTAGATCAATCCGATTCACTCAAACCGCCTCACCAAAAAAGAATACGAAATCGACCAACCT
ACAAACACCCATCATATCACACTCTTTATCATTCCCGCCACCAAAACCAGCCCCATTAAATAGAGTTAGCGAACCGCTAGAAAGTAAACATGTTGGTTCAAAGCCAAGAA
ACAGAAAATCTAGCCAACAGTATCGATCGGTAGCGGCGATGTCAGTTTTGATGATGACGTTGGCAATGATGGTAGTTTGGGGAAGAATTTGTGCGATATTGTGTACGGCA
CTGTGGATTTTTATTGTAACGAGTTTAAGGTCAATTGTTGAAGAATATGAACGAATTGATTTTGTTGAATCTGATTCATATTCCGAAGGGTTTAAGAAGAAATTAGTGGT
TTTAAAAGGTAACTTAGACCCCTCATCTAACTAA

mRNA sequence

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Protein sequence

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MDQSQSRFSLTKKLESFRSIRFTQTASPKKNTKSTNLQTPIISHSLSFPPPKPAPLNRVSEPLESKHVGSKPRNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICAILCTA
LWIFIVTSLRSIVEEYERIDFVESDSYSEGFKKKLVVLKGNLDPSSN

Chy1G018190 (gene) of Cucumber (hystrix) v1 genome