CuGenDBv2

Gene ID	Chy1G018260
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	F-box/WD-40 repeat-containing protein
Genome location	chrH01:23762070..23766214
RNA-Seq Expression	Chy1G018260
Synteny	Chy1G018260
Gene Ontology terms	GO:0051568 - histone H3-K4 methylation (biological process) GO:0048188 - Set1C/COMPASS complex (cellular component) GO:0042393 - histone binding (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR001810 - F-box domain IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036047 - F-box-like domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058585.1 F-box/WD-40 repeat-containing protein [Cucumis melo var. makuwa]

1.73e-310

95.38

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        MTPPPTADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTS+VSFSLEKPLL+CLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLALEKGRIRV QWIGHSVR EQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEK+PL+DFDFDVGKIVGL+G+QLCIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSG+ SDQRVVMLRSRNTVGIRTLC N SSRLVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTV+SCCMMDS+LLSTHQNGLG VEERRGKRLSDE PID ID
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRPSIT LAVGMNKIVTTHNDKFI+LWKFQS
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

XP_004135950.1 F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucumis sativus]

0.0

98.38

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCL VCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYS+PEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGV SDQRVVMLRSRNTVGIRTLCYNASSRLVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDS+LLSTHQ+GLGIVEERRGKRLSDE PIDTID
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRPSIT LAVGMNKIVTTHNDKFIKLWKFQS
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

XP_008461347.1 PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 [Cucumis melo]

3.49e-310

95.15

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        M PPPTADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTS+VSFSLEKPLL+CLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLALEKGRIRV QWIGHSVR EQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEK+PL+DFDFDVGKIVGL+G+QLCIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TFEKGLCMRY DAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSG+ SDQRVVMLRSRNTVGIRTLCYN SSRLVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTV+SCCMMDS+LLSTHQNGLG VEERRGKRLSDE PID ID
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRPSIT LAVGMNKIVTTHNDKFI+LWKFQS
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

XP_031744576.1 F-box/WD-40 repeat-containing protein At3g52030 isoform X2 [Cucumis sativus]

1.52e-278

98.42

Show/hide

Query:  NYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRC
        NYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRC
Subjt:  NYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRC

Query:  LEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDD
        LEEYS+PEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDD
Subjt:  LEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDD

Query:  QLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRI
        QLMFGGSLLGNIGVSGV SDQRVVMLRSRNTVGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRI
Subjt:  QLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRI

Query:  LDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        LDQNTGTVQSCCMMDS+LLSTHQ+GLGIVEERRGKRLSDE PIDTIDRRNRPSIT LAVGMNKIVTTHNDKFIKLWKFQS
Subjt:  LDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

XP_038899781.1 F-box/WD-40 repeat-containing protein At3g52030 [Benincasa hispida]

2.12e-295

90.53

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        MTPPP A+RSS RRRSD+DAKPVHSLS+DILCIIFSFLDLFDLVRC  VCKSWNYAIYKSEILRTFC RYQKQEMN+ASTSEVSFSLEKPLLECLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLAL++GRIRVSQWIGHSVR EQCRMKMGLILTGVGDKVMRLWSPE FRCLEEYSIPEK+PLVDFDFD+GKIVGL+GRQLCIWSRSG RSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TF KGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGSLLGNIGVSG+ SDQRV MLRSRNTVGIR+LCYN SS LVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLR MKSLWESRVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGTV+SCC+MDS+LLSTHQN LG VEER GKRLSDE PID I+
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRPSIT LAVGMNKI TTHNDKFI+LWKFQS
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBD6 F-box domain-containing protein

4.4e-250

98.38

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCL VCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYS+PEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGV SDQRVVMLRSRNTVGIRTLCYNASSRLVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDS+LLSTHQ+GLGIVEERRGKRLSDE PIDTID
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRPSIT LAVGMNKIVTTHNDKFIKLWKFQS
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

A0A1S3CEH9 F-box/WD-40 repeat-containing protein At3g52030

2.3e-243

95.15

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        M PPPTADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTS+VSFSLEKPLL+CLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLALEKGRIRV QWIGHSVR EQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEK+PL+DFDFDVGKIVGL+G+QLCIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TFEKGLCMRY DAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSG+ SDQRVVMLRSRNTVGIRTLCYN SSRLVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTV+SCCMMDS+LLSTHQNGLG VEERRGKRLSDE PID ID
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRPSIT LAVGMNKIVTTHNDKFI+LWKFQS
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

A0A5D3CFV2 F-box/WD-40 repeat-containing protein

1.4e-243

95.38

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        MTPPPTADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTS+VSFSLEKPLL+CLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLALEKGRIRV QWIGHSVR EQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEK+PL+DFDFDVGKIVGL+G+QLCIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSG+ SDQRVVMLRSRNTVGIRTLC N SSRLVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTV+SCCMMDS+LLSTHQNGLG VEERRGKRLSDE PID ID
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRPSIT LAVGMNKIVTTHNDKFI+LWKFQS
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

A0A6J1D7Z0 F-box/WD-40 repeat-containing protein At3g52030 isoform X1

1.5e-218

84.53

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        M PPP ADRSS R+RS +D+K V SLSHD+LCIIFSFLDLFDLVRC  VCKSWNYA++KSEIL+ FC R+QKQ+MNS S+SE+SFS EKPL  CLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLA E+  I+VS W GHSVR EQCRMKMGLILTGVGDKVMRLWS ENFRCLEEYSIP K+PLVDFDFD GKIVGL+GRQ+CIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TFEKGLCMRYFD EAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGS+LGNIGVSG+ SDQRV MLRSRNTVGIRTLCYNASS LVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMKSLWESRVSPN++YSL+HLQNDRSSLAVGGIDGILRIL+QNTGTV+SCC+MDS+LLST+QNGLG+VEER GKR+S E PID I+
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RRNRP IT LAVGMNKIVTTHNDKFI+LWKFQ+
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

A0A6J1HB56 F-box/WD-40 repeat-containing protein At3g52030 isoform X1

7.1e-216

83.83

Show/hide

Query:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM
        M PP  ADRSSARRRS++DAKPV+SLSHDILCIIFSFLDLFDLVRC  VCKSWN AI+ SE+LRTFC+++QKQEM S+S+ EVS S EKPLLECLEEIAM
Subjt:  MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAM

Query:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC
        ERHKLALE+GRIRVSQW+GHSVR EQCRMKMGLILTGVGDKVMRLWS ENFRCLEEYSIPEK+PL+DFDFD  KIVGL+GR LCIWSRSGKRSIFPSREC
Subjt:  ERHKLALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSREC

Query:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF
        TF +G CMRYFD EAVVGC DGTAHVFDMYSRRCSRI+RMLPGPVTCLCV DDQL+ GGSL GNIGVSG+ SDQRV MLRSRNT+GI+T+CYNASS LVF
Subjt:  TFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVF

Query:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID
        AGSTAGHVYCWDLRTMK LWESRVSPNV+YSL+HLQNDRSSLAVGGIDGILRILDQNTGTV+S C+MDS+LLST+Q+G+G+VEER G RLSDE PID I 
Subjt:  AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTID

Query:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS
        RR+RP IT LAVGMNKIVTTHNDKFI+LWKF++
Subjt:  RRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQS

SwissProt top hits

e value

%identity

Alignment

Q92636 Protein FAN

9.8e-05

25.32

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Query:  VGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTV---------QSCCMMD-SKLLST
        V + T+  NA+S L+ +G+  G V  WDL T   + +      ++       + R  L+  G DG L ++D  TG +         Q C + D + +LS 
Subjt:  VGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTV---------QSCCMMD-SKLLST

Query:  HQNGLGIVEERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQ
         Q+G  +V +  G ++S+ +   T       +   +    + I+T   D+ I  WK Q
Subjt:  HQNGLGIVEERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKFQ

Q9SV01 F-box/WD-40 repeat-containing protein At3g52030

2.2e-129

52.12

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Query:  TADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKL
        T D SSAR+        + SL  DILCIIFSFLDLFDLV C  VC SWN  I + ++L+  C +      +S S+S    SL++P    +E+ AM+ HK+
Subjt:  TADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKL

Query:  ALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGK---------------------IVGLIGRQLC
        AL +GRI + +W  HS RV QCRMK GL+LTGVGDKVMRLWS ++++C+EEYS+P+   L+DFDFD  K                     IVGL+G ++ 
Subjt:  ALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGK---------------------IVGLIGRQLC

Query:  IWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNT
        IW R+G+RSIFPSR  TF KGLCMRY D EAVVGCEDGTA VFDMYS+ CS+IIR   GP+TCL ++D+QL   GS LG + VS  L DQ V  L+S  T
Subjt:  IWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNT

Query:  V-GIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTH-QNGLGIV
          GI+T+C+N  + L F G+T G+V CWDLR M  LWE RVSPNV+YS+Q L+ND S +  GGIDG+LR++DQ +G V S  +MD K  +T  +N   ++
Subjt:  V-GIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTH-QNGLGIV

Query:  EERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKF
        E+RRGKR+S +M ID I+R+ RP I+ +A+GM K+VT HN K I +WKF
Subjt:  EERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKF

Arabidopsis top hits

e value

%identity

Alignment

AT3G52030.1 F-box family protein with WD40/YVTN repeat doamin

1.6e-130

52.12

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Query:  TADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKL
        T D SSAR+        + SL  DILCIIFSFLDLFDLV C  VC SWN  I + ++L+  C +      +S S+S    SL++P    +E+ AM+ HK+
Subjt:  TADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKL

Query:  ALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGK---------------------IVGLIGRQLC
        AL +GRI + +W  HS RV QCRMK GL+LTGVGDKVMRLWS ++++C+EEYS+P+   L+DFDFD  K                     IVGL+G ++ 
Subjt:  ALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGK---------------------IVGLIGRQLC

Query:  IWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNT
        IW R+G+RSIFPSR  TF KGLCMRY D EAVVGCEDGTA VFDMYS+ CS+IIR   GP+TCL ++D+QL   GS LG + VS  L DQ V  L+S  T
Subjt:  IWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNT

Query:  V-GIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTH-QNGLGIV
          GI+T+C+N  + L F G+T G+V CWDLR M  LWE RVSPNV+YS+Q L+ND S +  GGIDG+LR++DQ +G V S  +MD K  +T  +N   ++
Subjt:  V-GIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTH-QNGLGIV

Query:  EERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKF
        E+RRGKR+S +M ID I+R+ RP I+ +A+GM K+VT HN K I +WKF
Subjt:  EERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTTHNDKFIKLWKF

AT3G52030.2 F-box family protein with WD40/YVTN repeat doamin

3.0e-134

54.67

Show/hide

Query:  TADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKL
        T D SSAR+        + SL  DILCIIFSFLDLFDLV C  VC SWN  I + ++L+  C +      +S S+S    SL++P    +E+ AM+ HK+
Subjt:  TADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKL

Query:  ALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKG
        AL +GRI + +W  HS RV QCRMK GL+LTGVGDKVMRLWS ++++C+EEYS+P+   L+DFDFD  KIVGL+G ++ IW R+G+RSIFPSR  TF KG
Subjt:  ALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKG

Query:  LCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTV-GIRTLCYNASSRLVFAGST
        LCMRY D EAVVGCEDGTA VFDMYS+ CS+IIR   GP+TCL ++D+QL   GS LG + VS  L DQ V  L+S  T  GI+T+C+N  + L F G+T
Subjt:  LCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTV-GIRTLCYNASSRLVFAGST

Query:  AGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTH-QNGLGIVEERRGKRLSDEMPIDTIDRRN
         G+V CWDLR M  LWE RVSPNV+YS+Q L+ND S +  GGIDG+LR++DQ +G V S  +MD K  +T  +N   ++E+RRGKR+S +M ID I+R+ 
Subjt:  AGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTH-QNGLGIVEERRGKRLSDEMPIDTIDRRN

Query:  RPSITGLAVGMNKIVTTHNDKFIKLWKF
        RP I+ +A+GM K+VT HN K I +WKF
Subjt:  RPSITGLAVGMNKIVTTHNDKFIKLWKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTCCTCCACCGACTGCCGACAGGTCCTCGGCGAGAAGACGGAGTGATGTCGATGCAAAACCAGTTCATTCCCTAAGCCACGACATCTTGTGCATAATTTTC
TCGTTTCTTGACCTTTTCGACTTGGTTCGATGCTTAGCTGTTTGTAAATCCTGGAATTATGCCATTTATAAATCAGAGATATTGCGAACGTTTTGCTTGAGGTAT
CAGAAGCAGGAGATGAACTCTGCTAGTACTTCAGAAGTTTCATTTTCTTTGGAGAAGCCTTTGCTGGAATGTTTAGAGGAAATAGCGATGGAAAGGCATAAGTTG
GCCTTGGAGAAAGGCCGTATTAGAGTTTCTCAATGGATTGGCCATTCAGTGAGGGTTGAACAATGCCGAATGAAGATGGGCTTAATTCTGACAGGAGTGGGTGAT
AAAGTTATGAGACTTTGGTCGCCAGAGAACTTTAGATGTCTAGAAGAATATTCAATTCCTGAGAAAATGCCATTAGTCGACTTTGATTTTGACGTAGGCAAGATT
GTTGGTTTGATTGGCAGACAGTTGTGCATATGGAGTCGGAGTGGGAAAAGAAGTATATTTCCTTCACGTGAATGTACTTTTGAGAAGGGTTTGTGCATGCGTTAC
TTTGATGCAGAGGCAGTTGTGGGTTGTGAAGATGGGACAGCCCATGTATTTGACATGTACAGTAGGAGATGCTCTAGAATTATCAGGATGCTTCCTGGACCAGTG
ACATGCTTATGTGTGAATGATGATCAGCTCATGTTTGGTGGTTCTCTGCTTGGGAACATTGGAGTATCAGGTGTTCTGTCTGATCAGCGGGTAGTAATGCTTAGA
TCAAGAAATACCGTAGGCATAAGGACTTTGTGTTACAACGCCTCTTCACGTTTAGTGTTTGCGGGATCAACTGCCGGTCATGTCTATTGTTGGGACCTCAGGACT
ATGAAATCCTTATGGGAATCCCGAGTGAGCCCCAACGTCATATATTCTTTGCAACATCTCCAAAATGACAGGTCAAGTTTGGCCGTTGGTGGAATAGATGGAATT
CTACGTATTTTGGATCAGAATACGGGCACTGTGCAGTCGTGTTGCATGATGGATAGTAAATTGTTATCGACGCATCAAAACGGTCTCGGAATCGTCGAAGAAAGG
AGAGGGAAAAGACTGTCAGATGAGATGCCTATTGATACAATAGACAGAAGGAATAGGCCTTCGATCACAGGCTTGGCCGTTGGAATGAATAAAATAGTCACAACG
CACAATGATAAGTTCATTAAATTGTGGAAGTTTCAAAGCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKSEILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKL
ALEKGRIRVSQWIGHSVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKMPLVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKGLCMRY
FDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLLGNIGVSGVLSDQRVVMLRSRNTVGIRTLCYNASSRLVFAGSTAGHVYCWDLRT
MKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSKLLSTHQNGLGIVEERRGKRLSDEMPIDTIDRRNRPSITGLAVGMNKIVTT
HNDKFIKLWKFQS

Chy1G018260 (gene) of Cucumber (hystrix) v1 genome