CuGenDBv2

Gene ID	Chy1G019280
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein HEADING DATE REPRESSOR 1-like isoform X2
Genome location	chrH01:24498579..24502564
RNA-Seq Expression	Chy1G019280
Synteny	Chy1G019280
Gene Ontology terms	GO:0009909 - regulation of flower development (biological process)
InterPro domains	IPR038864 - Protein heading date repressor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004135890.1 protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus]

1.18e-139

97.14

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE
        MEH HS KIDRILEGFSPASAPRI WNSRRRSASGRNLDKETEDQDSAN TCDKQEVSPGNDNIS+DTD VLPELSERRKALFEPLEPVRNINGRRPSAE
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE

Query:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
        SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
Subjt:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN

Query:  EGADDGSDEP
        EGADDGSDEP
Subjt:  EGADDGSDEP

XP_008461210.1 PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo]

1.36e-132

94.76

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE
        MEH HS KIDRILEGFSPASAPRI WNSRRRSASGRNL KETEDQDSAN TCDKQE SP NDNIS+DTDTV PELSERRKALFEPLEPVRNINGRRPSAE
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE

Query:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
        SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
Subjt:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN

Query:  EGADDGSDEP
        EGAD GSDEP
Subjt:  EGADDGSDEP

XP_011659486.1 protein HEADING DATE REPRESSOR 1 isoform X1 [Cucumis sativus]

7.28e-137

95.31

Show/hide

Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSAS---GRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP
        MEH HS KIDRILEGFSPASAPRI WNSRRRS S   GRNLDKETEDQDSAN TCDKQEVSPGNDNIS+DTD VLPELSERRKALFEPLEPVRNINGRRP
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSAS---GRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP

Query:  SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSM
        SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSM
Subjt:  SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSM

Query:  LDNEGADDGSDEP
        LDNEGADDGSDEP
Subjt:  LDNEGADDGSDEP

XP_022148239.1 protein HEADING DATE REPRESSOR 1 [Momordica charantia]

5.50e-113

83.41

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISK-DTDTVLPELSERRKALFEPLEPVRNINGRRPSA
        ME  +S KIDRILEGFSPASAPRIHW SRRRSASGRNLDK TED DSAN   DKQE     D     + + V PELSERR+ALFEPLEPV+NINGRRPSA
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISK-DTDTVLPELSERRKALFEPLEPVRNINGRRPSA

Query:  ESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD
        ESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKSKRSEVERENAMLHDQINMLM+ML+
Subjt:  ESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD

Query:  NEGADDGSDEP
        NEGAD GSDEP
Subjt:  NEGADDGSDEP

XP_038897908.1 protein HEADING DATE REPRESSOR 1 [Benincasa hispida]

1.23e-124

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE
        ME  HS KIDRILEGFSPASAPRI W SRRRSASGRNLDK TED DSA  TCDKQE S GND +++DT+TVLPELSERRKALFEPLEPV+NINGRRPSAE
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE

Query:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
        SLLPPPDFD+T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQ+QLLQEKSKRSEVERENAMLHDQINMLMSMLDN
Subjt:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN

Query:  EGADDGSDEP
        EGAD GSDEP
Subjt:  EGADDGSDEP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6R3 Uncharacterized protein

1.1e-105

95.31

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRS---ASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP
        MEH HS KIDRILEGFSPASAPRI WNSRRRS    SGRNLDKETEDQDSAN TCDKQEVSPGNDNIS+DTD VLPELSERRKALFEPLEPVRNINGRRP
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRS---ASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP

Query:  SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSM
        SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSM
Subjt:  SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSM

Query:  LDNEGADDGSDEP
        LDNEGADDGSDEP
Subjt:  LDNEGADDGSDEP

A0A1S3CE60 uncharacterized protein LOC103499861

1.1e-102

94.76

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE
        MEH HS KIDRILEGFSPASAPRI WNSRRRSASGRNL KETEDQDSAN TCDKQE SP NDNIS+DTDTV PELSERRKALFEPLEPVRNINGRRPSAE
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE

Query:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
        SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
Subjt:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN

Query:  EGADDGSDEP
        EGA DGSDEP
Subjt:  EGADDGSDEP

A0A5A7UUH2 Protein HEADING DATE REPRESSOR 1-like isoform X2

1.1e-102

94.76

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE
        MEH HS KIDRILEGFSPASAPRI WNSRRRSASGRNL KETEDQDSAN TCDKQE SP NDNIS+DTDTV PELSERRKALFEPLEPVRNINGRRPSAE
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAE

Query:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
        SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN
Subjt:  SLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDN

Query:  EGADDGSDEP
        EGA DGSDEP
Subjt:  EGADDGSDEP

A0A6J1D3E7 protein HEADING DATE REPRESSOR 1

1.8e-87

83.41

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISK-DTDTVLPELSERRKALFEPLEPVRNINGRRPSA
        ME  +S KIDRILEGFSPASAPRIHW SRRRSASGRNLDK TED DSAN   DKQE     D     + + V PELSERR+ALFEPLEPV+NINGRRPSA
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISK-DTDTVLPELSERRKALFEPLEPVRNINGRRPSA

Query:  ESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD
        ESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKSKRSEVERENAMLHDQINMLM+ML+
Subjt:  ESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD

Query:  NEGADDGSDEP
        NEGA DGSDEP
Subjt:  NEGADDGSDEP

A0A6J1H5Q2 protein HEADING DATE REPRESSOR 1-like isoform X2

1.2e-80

78.2

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Query:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDK-QEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSA
        M   +S K+DRILEGFSPASAPRI W SRRRSA+GR LD  T+D D+A+ T DK QE  P          T+ P+LS+RRKALFEPLE ++NINGRRPSA
Subjt:  MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDK-QEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSA

Query:  ESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD
        ESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ++MLMSML+
Subjt:  ESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD

Query:  NEGADDGSDEP
        NEGA DGSDEP
Subjt:  NEGADDGSDEP

SwissProt top hits

e value

%identity

Alignment

B8AE37 Protein HEADING DATE REPRESSOR 1

2.1e-53

59.51

Show/hide

Query:  PASA--PRIHWNSRRRSAS--GRNLDKETEDQ---DSANTTCDKQEVSPGNDNISKDTDTVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPP
        PASA  PRI W SRRRSAS  GR+L +E   +   +  N    ++ +   + N     D V P+    LSE+RKALFEPLEP   ING+R SAE LLPPP
Subjt:  PASA--PRIHWNSRRRSAS--GRNLDKETEDQ---DSANTTCDKQEVSPGNDNISKDTDTVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPP

Query:  DFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD-NEGADD
        DF+  +YP+GWL+GKKRKLVNVDVVESMRRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+MLH+Q++MLM+MLD NE  D+
Subjt:  DFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD-NEGADD

Query:  GSDEP
          + P
Subjt:  GSDEP

Q6K678 Protein HEADING DATE REPRESSOR 1

2.1e-53

59.51

Show/hide

Query:  PASA--PRIHWNSRRRSAS--GRNLDKETEDQ---DSANTTCDKQEVSPGNDNISKDTDTVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPP
        PASA  PRI W SRRRSAS  GR+L +E   +   +  N    ++ +   + N     D V P+    LSE+RKALFEPLEP   ING+R SAE LLPPP
Subjt:  PASA--PRIHWNSRRRSAS--GRNLDKETEDQ---DSANTTCDKQEVSPGNDNISKDTDTVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPP

Query:  DFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD-NEGADD
        DF+  +YP+GWL+GKKRKLVNVDVVESMRRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+MLH+Q++MLM+MLD NE  D+
Subjt:  DFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLD-NEGADD

Query:  GSDEP
          + P
Subjt:  GSDEP

Arabidopsis top hits

e value

%identity

Alignment

AT1G80940.1 unknown protein

9.1e-60

60.89

Show/hide

Query:  DRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDF
        D  + GF P S  +I W SR+RSA   NLDK  E       T +K E++  +     +  T  P LSE+RKALFEPLEP+ N+NG+RP +A+SLLPPPDF
Subjt:  DRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDF

Query:  DETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDNEGADDGSD
        +   YP+GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQL+ED+RCLEHLQ+QLLQE+SKR+E+EREN ML +Q++ML++M+  E  ++G++
Subjt:  DETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDNEGADDGSD

Query:  EP
        EP
Subjt:  EP

AT1G80940.2 unknown protein

1.3e-34

57.86

Show/hide

Query:  DRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDF
        D  + GF P S  +I W SR+RSA   NLDK  E       T +K E++  +     +  T  P LSE+RKALFEPLEP+ N+NG+RP +A+SLLPPPDF
Subjt:  DRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDF

Query:  DETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE
        +   YP+GWLIGKKRKLVNVDVVESMRRIAVQEMNRK ++
Subjt:  DETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAACACTATCATTCCTGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCATTGGAATTCTCGTCGGAGGTCAGCTAGCGGGAGGAA
TTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATACAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGACAACATATCTAAGGACACCGACACAGTTCTTCCCG
AGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAA
ACCACTTATCCCCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGACCG
GGAAATCAATGGTTTAAACGAGCAACTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAACGATCAGAAGTTGAAAGAGAGA
ATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCATAA

mRNA sequence

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Protein sequence

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MEHYHSCKIDRILEGFSPASAPRIHWNSRRRSASGRNLDKETEDQDSANTTCDKQEVSPGNDNISKDTDTVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDE
TTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDNEGADDGSDEP

Chy1G019280 (gene) of Cucumber (hystrix) v1 genome