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Chy2G022860 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G022860
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptioncytochrome c6, chloroplastic
Genome locationchrH02:136850..138320
RNA-Seq ExpressionChy2G022860
SyntenyChy2G022860
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026384.1 Cytochrome c6, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.54e-4078.48Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG D+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
XP_008439440.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]2.01e-4182.28Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG DAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]6.07e-4078.48Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG D+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]6.07e-4078.48Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG D+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]2.61e-4181.01Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG DAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein1.3e-2981.01Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG DAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
A0A1S3AYD3 cytochrome c6, chloroplastic9.3e-3182.28Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG DAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
A0A6J1CXZ2 cytochrome c6, chloroplastic2.5e-2877.22Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG D EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQE+EIRLLAKFVKIQADRGW NP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
A0A6J1EG38 cytochrome c6, chloroplastic1.3e-2978.48Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG D+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
A0A6J1KPJ4 cytochrome c6, chloroplastic1.3e-2978.48Show/hide
Query:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GN+++   T+      RNG D+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  GNLLELEKTI------RNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
SwissProt top hitse value%identityAlignment
Q93VA3 Cytochrome c6, chloroplastic7.1e-2872Show/hide
Query:  VILKGNLLELEKTIRNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP
        +I  G  L  +   RNGVD EEEIYR+TY+GKGRMPGFGE C PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  VILKGNLLELEKTIRNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP
Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c5.0e-2972Show/hide
Query:  VILKGNLLELEKTIRNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP
        +I  G  L  +   RNGVD EEEIYR+TY+GKGRMPGFGE C PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  VILKGNLLELEKTIRNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGGTGCCACACTCTTTTCAAGTGATCTTGAAAGGTAATCTTCTAGAACTTGAGAAAACAATAAGAAATGG
AGTTGATGCCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTT
TGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGGTGCCACACTCTTTTCAAGTGATCTTGAAAGGTAATCTTCTAGAACTTGAGAAAACAATAAGAAATGG
AGTTGATGCCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTT
TGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
Protein sequenceShow/hide protein sequence
MSCARRNDRNRKRRVPHSFQVILKGNLLELEKTIRNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP