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Chy2G023780 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G023780
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionF-box protein SKIP19-like
Genome locationchrH02:780867..781731
RNA-Seq ExpressionChy2G023780
SyntenyChy2G023780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3962849.1 hypothetical protein CMV_012689 [Castanea mollissima]2.85e-0637.38Show/hide
Query:  LLDHIYISIVSFDVETSKTVGCCCLLLESFKL----FENP-----------------------VGDRLASGPVMA------DLESLDLHQCFSLNLAGDL
        LL+ + IS  SF  E+   +G CC LL+SFKL    F  P                        G++L +  + A       LESLDL QCF++NL+GDL
Subjt:  LLDHIYISIVSFDVETSKTVGCCCLLLESFKL----FENP-----------------------VGDRLASGPVMA------DLESLDLHQCFSLNLAGDL

Query:  GKECAKR
        GK CA+R
Subjt:  GKECAKR

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]1.16e-0736.94Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---------------------------FENPVGDRLASGPVMA------DLESLDLHQCFSLNL
        S   LL+H+ IS+ SF  +T +TVG CC LL+S KL                           +    G  L    + A      DLESLDL QCF+L+L
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---------------------------FENPVGDRLASGPVMA------DLESLDLHQCFSLNL

Query:  AGDLGKECAKR
         G LG ECA+R
Subjt:  AGDLGKECAKR

XP_022925898.1 F-box protein SKIP19-like isoform X2 [Cucurbita moschata]3.79e-0638.53Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---FENPV----------------------GDRLASGPVMA------DLESLDLHQCFSLNLAG
        S   LL+ + IS  SFDVET +T+G C  LL+S KL   F   V                      G+ L +  + A      DLESLDL QCF+LNLAG
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---FENPV----------------------GDRLASGPVMA------DLESLDLHQCFSLNLAG

Query:  DLGKECAKR
         LG +C+++
Subjt:  DLGKECAKR

XP_022978592.1 F-box protein SKIP19-like [Cucurbita maxima]3.79e-0638.53Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---FENPV----------------------GDRLASGPVMA------DLESLDLHQCFSLNLAG
        S   LL+ + IS  SFDVET +T+G C  LL+S KL   F   V                      G+ L +  + A      DLESLDL QCF+LNLAG
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---FENPV----------------------GDRLASGPVMA------DLESLDLHQCFSLNLAG

Query:  DLGKECAKR
         LG +C+++
Subjt:  DLGKECAKR

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]2.30e-1142.34Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKLFENP---------------------------VGDRLASGPVMA------DLESLDLHQCFSLNL
        S   LL+H+ I I SFDVET KTVG CC LL+  KL E                             +G+ L +  + A      DLESLDL QCF LNL
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKLFENP---------------------------VGDRLASGPVMA------DLESLDLHQCFSLNL

Query:  AGDLGKECAKR
         G LGKECA+R
Subjt:  AGDLGKECAKR

TrEMBL top hitse value%identityAlignment
A0A251JDM0 F-box domain-containing protein7.1e-0534.23Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL----FENP-----------------------VGDRLASGPVMA------DLESLDLHQCFSLNL
        + F LL+ + IS  S   +  + VG CC LL+SFKL    F++P                        G++L +  + A      +LESLDL QCF++NL
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL----FENP-----------------------VGDRLASGPVMA------DLESLDLHQCFSLNL

Query:  AGDLGKECAKR
         G LGK C +R
Subjt:  AGDLGKECAKR

A0A6J1CXS5 F-box protein SKIP19-like1.7e-0636.94Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---------------------------FENPVGDRLASGPVMA------DLESLDLHQCFSLNL
        S   LL+H+ IS+ SF  +T +TVG CC LL+S KL                           +    G  L    + A      DLESLDL QCF+L+L
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL---------------------------FENPVGDRLASGPVMA------DLESLDLHQCFSLNL

Query:  AGDLGKECAKR
         G LG ECA+R
Subjt:  AGDLGKECAKR

A0A6J1ECV6 F-box protein SKIP19-like isoform X13.2e-0536.7Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL-----------------------------FENPVGDRLASGPV--MADLESLDLHQCFSLNLAG
        S   LL+ + IS  SFDVET +T+G C  LL+S KL                             F N + +R     +    DLESLDL QCF+LNLAG
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL-----------------------------FENPVGDRLASGPV--MADLESLDLHQCFSLNLAG

Query:  DLGKECAKR
         LG +C+++
Subjt:  DLGKECAKR

A0A6J1EGI8 F-box protein SKIP19-like isoform X23.2e-0536.7Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL-----------------------------FENPVGDRLASGPV--MADLESLDLHQCFSLNLAG
        S   LL+ + IS  SFDVET +T+G C  LL+S KL                             F N + +R     +    DLESLDL QCF+LNLAG
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL-----------------------------FENPVGDRLASGPV--MADLESLDLHQCFSLNLAG

Query:  DLGKECAKR
         LG +C+++
Subjt:  DLGKECAKR

A0A6J1ILH5 F-box protein SKIP19-like3.2e-0536.7Show/hide
Query:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL-----------------------------FENPVGDRLASGPV--MADLESLDLHQCFSLNLAG
        S   LL+ + IS  SFDVET +T+G C  LL+S KL                             F N + +R     +    DLESLDL QCF+LNLAG
Subjt:  SSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKL-----------------------------FENPVGDRLASGPV--MADLESLDLHQCFSLNLAG

Query:  DLGKECAKR
         LG +C+++
Subjt:  DLGKECAKR

SwissProt top hitse value%identityAlignment
Q9M0U9 F-box protein SKIP198.1e-0632.32Show/hide
Query:  LDHIYISIVSFDVETSKTVGCCCLLLESFKLFENPV----GDRLASGPVM-------------------------ADLESLDLHQCFSLNLAGDLGKEC
        L+ + +S  SF VE+ + VG CCL +++ KL ++P      D LA    M                         ++LE LDL +CF++NL GDL K C
Subjt:  LDHIYISIVSFDVETSKTVGCCCLLLESFKLFENPV----GDRLASGPVM-------------------------ADLESLDLHQCFSLNLAGDLGKEC

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein5.8e-0732.32Show/hide
Query:  LDHIYISIVSFDVETSKTVGCCCLLLESFKLFENPV----GDRLASGPVM-------------------------ADLESLDLHQCFSLNLAGDLGKEC
        L+ + +S  SF VE+ + VG CCL +++ KL ++P      D LA    M                         ++LE LDL +CF++NL GDL K C
Subjt:  LDHIYISIVSFDVETSKTVGCCCLLLESFKLFENPV----GDRLASGPVM-------------------------ADLESLDLHQCFSLNLAGDLGKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCTCTTCTAAAATTTGCAAGGATCCTCGTCATCGTTCAAATCATCTTAGAAGACTCAAGCTTCTCGCTGTTAGACCATATATACATCTCTATAGTTTCATTTGA
TGTGGAAACTTCGAAAACCGTTGGATGTTGTTGCCTTCTTCTGGAATCGTTCAAACTGTTTGAGAACCCTGTTGGAGACCGTCTTGCCAGTGGCCCAGTGATGGCTGATT
TAGAATCTCTTGACTTGCACCAATGTTTCAGTTTGAACTTGGCCGGAGATTTGGGAAAAGAATGTGCTAAAAGAAGGGTCAAAGTTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCTCTTCTAAAATTTGCAAGGATCCTCGTCATCGTTCAAATCATCTTAGAAGACTCAAGCTTCTCGCTGTTAGACCATATATACATCTCTATAGTTTCATTTGA
TGTGGAAACTTCGAAAACCGTTGGATGTTGTTGCCTTCTTCTGGAATCGTTCAAACTGTTTGAGAACCCTGTTGGAGACCGTCTTGCCAGTGGCCCAGTGATGGCTGATT
TAGAATCTCTTGACTTGCACCAATGTTTCAGTTTGAACTTGGCCGGAGATTTGGGAAAAGAATGTGCTAAAAGAAGGGTCAAAGTTAACTAA
Protein sequenceShow/hide protein sequence
MFALLKFARILVIVQIILEDSSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKLFENPVGDRLASGPVMADLESLDLHQCFSLNLAGDLGKECAKRRVKVN