; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G024390 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G024390
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDNA-binding protein
Genome locationchrH02:1214093..1216728
RNA-Seq ExpressionChy2G024390
SyntenyChy2G024390
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052566.1 DNA-binding protein [Cucumis melo var. makuwa]1.90e-65100Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

KAG6594495.1 DNA-binding protein, partial [Cucurbita argyrosperma subsp. sororia]2.60e-6396.52Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]2.90e-65100Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

XP_031744105.1 DNA-binding protein DDB_G0278111 isoform X1 [Cucumis sativus]3.20e-65100Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]8.31e-6599.13Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

TrEMBL top hitse value%identityAlignment
A0A0A0KKK2 Uncharacterized protein5.8e-48100Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

A0A1S3AZB0 DNA-binding protein DDB_G02781115.8e-48100Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

A0A5D3CSS6 DNA-binding protein5.8e-48100Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

A0A6J1IUM6 DNA-binding protein DDB_G0278111-like isoform X11.9e-4696.52Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVL+DDD
Subjt:  KVTIQRRRSVLEDDD

A0A6J1IVC3 DNA-binding protein DDB_G0278111-like isoform X21.9e-4696.52Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVL+DDD
Subjt:  KVTIQRRRSVLEDDD

SwissProt top hitse value%identityAlignment
O14737 Programmed cell death protein 55.8e-1345.26Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

P56812 Programmed cell death protein 55.8e-1345.26Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI +LE+++ QT K+T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

Q2HJH9 Programmed cell death protein 57.6e-1345.26Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI +LE+++ QT K+T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

Q54YS0 DNA-binding protein DDB_G02781115.5e-1953.51Show/hide
Query:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK
        Q+L   +G G   +PE Q+ QE  R EA ERRQ +L QIL+  ARERLSRI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ+ ++ TK+T 
Subjt:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK

Query:  VTIQRRRSVLEDDD
        +T++RR   +EDDD
Subjt:  VTIQRRRSVLEDDD

Q5RBT0 Programmed cell death protein 55.8e-1345.26Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein7.5e-4081.36Show/hide
Query:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
        MQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTT
Subjt:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT

Query:  KQTKVTIQRRRSVLEDDD
        KQTKVT QRRR V  DDD
Subjt:  KQTKVTIQRRRSVLEDDD

AT1G29850.2 double-stranded DNA-binding family protein9.8e-4080.67Show/hide
Query:  MQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQT
        MQELMA++GM    G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QT
Subjt:  MQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQT

Query:  TKQTKVTIQRRRSVLEDDD
        TKQTKVT QRRR V  DDD
Subjt:  TKQTKVTIQRRRSVLEDDD

AT1G29850.3 double-stranded DNA-binding family protein2.0e-3778.76Show/hide
Query:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
        MQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTT
Subjt:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT

Query:  KQTKVTIQRRRSV
        KQTKVT+    +V
Subjt:  KQTKVTIQRRRSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAACTCATGGCCCAGCGTGGCATGGGGAGCCAAAATAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGAGTGAAGCAGAGGAACGTAGGCAAATGATGCT
GAGTCAGATTCTGTCAATGCAAGCCAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCACGAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGG
GGCAAATTGTAGAGAAGGTCTCTGAAGAGAGGCTTATTACATTGCTAGAACAAATCAACAATCAGACCACAAAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTT
CTAGAGGATGACGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAACTCATGGCCCAGCGTGGCATGGGGAGCCAAAATAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGAGTGAAGCAGAGGAACGTAGGCAAATGATGCT
GAGTCAGATTCTGTCAATGCAAGCCAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCACGAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGG
GGCAAATTGTAGAGAAGGTCTCTGAAGAGAGGCTTATTACATTGCTAGAACAAATCAACAATCAGACCACAAAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTT
CTAGAGGATGACGATTAG
Protein sequenceShow/hide protein sequence
MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSV
LEDDD