CuGenDBv2

Gene ID	Chy2G024660
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	cyclic phosphodiesterase-like
Genome location	chrH02:1359724..1361630
RNA-Seq Expression	Chy2G024660
Synteny	Chy2G024660
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052590.1 cyclic phosphodiesterase-like [Cucumis melo var. makuwa]

2.93e-107

84.18

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MVNPESASIQS+EEET+VYSVWALPPEDVSARIENLMNSLRSEFGGP FEPHITVVGAIRLTAEDAL+KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTP-----YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT EV+   SH        S+ P     YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGL+FPITRLAL  TDT+DETLKSW+KIVEHDLSS
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTP-----YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

XP_004134643.1 cyclic phosphodiesterase [Cucumis sativus]

9.47e-130

95.29

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS+EEETHVYSVWALPPEDVSARIENLM SLRSEFGGPLFEPHITVVGAIRLTAEDAL+KFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT EVVETSSHFCKHF FKSSTPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGLRFPITRLALC TDTADETLKSWDKIVEHDLSS
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

XP_008439703.1 PREDICTED: cyclic phosphodiesterase-like [Cucumis melo]

8.70e-126

93.19

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MVNPESASIQS+EEET+VYSVWALPPEDVSARIENLMNSLRSEFGGP FEPHITVVGAIRLTAEDAL+KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT EVVETSSHFCKHFGFK+STPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGL+FPITRLAL  TDT+DETLKSW+KIVEHDLSS
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

XP_023522563.1 cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo]

1.95e-106

79.58

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES  IQ +E E +VYSVWALPPEDV+ARI  LMNSLRSEFGGP FEPHITVVGAIRLT +DAL+KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT EVVETSSH C HFG+K+STPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL  TDT DETLKSW+KI E DL S
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

XP_038882567.1 cyclic phosphodiesterase-like [Benincasa hispida]

3.17e-112

83.77

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPESASIQ +E E +VYSVWALPPEDV+ARI+NLMNSLRSEFGGP FEPHITVVGAIRLT +DAL+KFR+ACQG+KAYQATVDHV+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IH T EVVETSSH C HFG+K+STPYMPHMSLLYA+ISDEKKKQAK IADKLDEAVNGL+FPITRLAL  TDT DETLKSW+KI EH+L S
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLS9 Uncharacterized protein

4.2e-100

95.29

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M+NPESASIQS+EEETHVYSVWALPPEDVSARIENLM SLRSEFGGPLFEPHITVVGAIRLTAEDAL+KFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT EVVETSSHFCKHF FKSSTPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGLRFPITRLALC TDTADETLKSWDKIVEHDLSS
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

A0A1S3AYZ1 cyclic phosphodiesterase-like

4.4e-97

93.19

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MVNPESASIQS+EEET+VYSVWALPPEDVSARIENLMNSLRSEFGGP FEPHITVVGAIRLTAEDAL+KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT EVVETSSHFCKHFGFK+STPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGL+FPITRLAL  TDT+DETLKSW+KIVEHDLSS
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

A0A5D3CNS3 Cyclic phosphodiesterase-like

6.1e-83

84.18

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        MVNPESASIQS+EEET+VYSVWALPPEDVSARIENLMNSLRSEFGGP FEPHITVVGAIRLTAEDAL+KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTP-----YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT EV+   SH        S+ P     YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGL+FPITRLAL  TDT+DETLKSW+KIVEHDLSS
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTP-----YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

A0A6J1EGC1 cyclic phosphodiesterase-like

4.9e-80

78.53

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES  IQ +E E +VYSVWALPPEDV ARI  LMNSLRSEFGGP FEPHITVVGAIRLT +DAL+KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT +VVETSSH C HFG+K +TPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL  TDT DETLKSW+KI E DL S
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

A0A6J1INY2 cyclic phosphodiesterase-like

4.0e-82

78.53

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Query:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL
        M NPES +IQ +E E +VYSVWALPPEDV+ARI  LMNSLRSEFGGP FEPHITVVGAIRLT +DAL+KFR+AC+G+KAYQATVD V+TGTFFYQCVFLL
Subjt:  MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLL

Query:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        IHPT +VVETSSH C HFG+K+STPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FP+TRLAL  TDT DETLKSW+KI E DL S
Subjt:  IHPTAEVVETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

5.0e-50

52.81

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Query:  EEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTAEVVETSS
        E +  VYSVWALP E+   R + LM +LRSEF GP F PH+TV  +  LTA++A   F +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+E   
Subjt:  EEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTAEVVETSS

Query:  HFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLS
        H   HF   ++TPYMPH+SLLYA +++E+KK A+E A  LD +++GL F + RLALC TDT D+TL++W+ +   +L+
Subjt:  HFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLS

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

3.6e-51

52.81

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Query:  EEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTAEVVETSS
        E +  VYSVWALP E+   R + LM +LRSEF GP F PH+TV  +  LTA++A   F +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+E   
Subjt:  EEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTAEVVETSS

Query:  HFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLS
        H   HF   ++TPYMPH+SLLYA +++E+KK A+E A  LD +++GL F + RLALC TDT D+TL++W+ +   +L+
Subjt:  HFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLS

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

3.0e-42

44.57

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Query:  QSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAI--RLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTAEV
        + +EEE  +Y++WA+P +DV  R++ LM  LRSEFGGP F+PH+T+VG    +LTA +A   F++AC+G K Y ATVD V+ GT ++QC+++ +  T EV
Subjt:  QSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAI--RLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTAEV

Query:  VETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS
        +  + HF  HF   +   Y+PHMS+LY  +++ +KK+A E A  LD +++GL F I R+AL  TD     + SW K+ EH L S
Subjt:  VETSSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSS

Sequences

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CDS sequence

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ATGGTGAACCCAGAATCGGCATCTATCCAATCCAATGAAGAGGAAACGCACGTGTATTCTGTGTGGGCTCTTCCTCCCGAAGATGTTTCCGCCAGAATCGAGAACCTCAT
GAACAGCCTCAGATCCGAGTTTGGCGGGCCCCTATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCACCGCTGAAGACGCCCTTAGCAAATTCCGCACGGCTT
GTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTAACCACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCGCTGAGGTGGTGGAGACA
AGTTCACATTTTTGTAAACATTTTGGTTTCAAAAGCTCTACCCCTTACATGCCGCATATGAGCCTACTGTATGCCCACATATCAGACGAAAAAAAGAAGCAGGCAAAAGA
AATAGCAGACAAGCTCGACGAAGCCGTGAACGGCCTGAGATTCCCCATTACTCGACTTGCACTGTGCACAACAGACACCGCGGATGAAACTCTGAAGTCCTGGGATAAAA
TTGTAGAACACGATCTTTCATCAAAAGAATTAAGCATTTCTCCAGTTGCATCTAAAAATGGGAACGTTGACAATTTTATAGTTAAACAAGTGGACAAAAAATAA

mRNA sequence

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Protein sequence

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MVNPESASIQSNEEETHVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTAEDALSKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTAEVVET
SSHFCKHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCTTDTADETLKSWDKIVEHDLSSKELSISPVASKNGNVDNFIVKQVDKK

Chy2G024660 (gene) of Cucumber (hystrix) v1 genome