; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G025010 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G025010
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description50S ribosomal protein L34, chloroplastic
Genome locationchrH02:1564321..1565154
RNA-Seq ExpressionChy2G025010
SyntenyChy2G025010
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000271 - Ribosomal protein L34


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134668.1 50S ribosomal protein L34, chloroplastic [Cucumis sativus]2.76e-9398.71Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLSTPWVSTGAIAVR PSASLVFSTGSRGYCSVSLNT NNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

XP_008439748.1 PREDICTED: 50S ribosomal protein L34, chloroplastic [Cucumis melo]2.09e-8895.48Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLS+PWVS GAIAVR PSASLV STGSRG CSVSLNTANN SARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGR LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

XP_022142342.1 50S ribosomal protein L34, chloroplastic [Momordica charantia]5.03e-8088.39Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLSTPWV +GA+AVR PSASLV STGSR  CSVSLNTANN SARSGLL CSFLPSSSLSCSSSFSG SLGLDW+S++ VGQGKGR LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

XP_023003306.1 50S ribosomal protein L34, chloroplastic-like [Cucurbita maxima]3.72e-7487.74Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISV+S+  VST    VR PSASLVFSTGSR   S+SLNTANN SAR GLLHCSFLPSSSLSCSSSFSGLSLGLDWS K+GVGQGK R LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

XP_038883793.1 50S ribosomal protein L34, chloroplastic [Benincasa hispida]4.04e-8693.55Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLS+PWVSTGA AVR PSASLV STG RG CSVSLNTANN SARSGLLHCSFL SSSLSCSSSFSGLSLGLDWSSK+GVGQGKGR LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

TrEMBL top hitse value%identityAlignment
A0A0A0KI92 Uncharacterized protein5.9e-7298.71Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLSTPWVSTGAIAVR PSASLVFSTGSRGYCSVSLNT NNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

A0A1S3AZG6 50S ribosomal protein L34, chloroplastic3.0e-6895.48Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLS+PWVS GAIAVR PSASLV STGSRG CSVSLNTANN SARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGR LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

A0A5D3CSJ7 50S ribosomal protein L343.0e-6895.48Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLS+PWVS GAIAVR PSASLV STGSRG CSVSLNTANN SARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGR LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

A0A6J1CMH5 50S ribosomal protein L34, chloroplastic7.3e-6288.39Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISVLSTPWV +GA+AVR PSASLV STGSR  CSVSLNTANN SARSGLL CSFLPSSSLSCSSSFSG SLGLDW+S++ VGQGKGR LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGK A
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

A0A6J1KNU0 50S ribosomal protein L34, chloroplastic-like3.2e-5787.74Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA
        MAAISV+S+  VST    VR PSASLVFSTGSR   S+SLNTANN SAR GLLHCSFLPSSSLSCSSSFSGLSLGLDWS K+GVGQGK R LVVRAGKAA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

SwissProt top hitse value%identityAlignment
P82244 50S ribosomal protein L34, chloroplastic1.2e-3767.95Show/hide
Query:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFL-PSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKA
        MA +S+LST      AI  R PSASL F TGSR   +    + N  SARSG LHCSFL PSSSL  SS+FSGLSLGLD +S  GV   + R  VVRAGKA
Subjt:  MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFL-PSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKA

Query:  ALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        ALC TKR+RSRKSLARTHGFR RM TT+GRA+LKRRRAKGRK+LCTK+NPSSGKRA
Subjt:  ALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

Q04CX6 50S ribosomal protein L348.7e-0470.59Show/hide
Query:  RKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ++ L R HGFR+RM T NGR VL RRRAKGRKVL
Subjt:  RKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q1I2H1 50S ribosomal protein L348.7e-0483.33Show/hide
Query:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ARTHGFR RM T NGRAVL RRRAKGRK L
Subjt:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q48BE9 50S ribosomal protein L348.7e-0483.33Show/hide
Query:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL
        ARTHGFR RM T NGRAVL RRRAKGRK L
Subjt:  ARTHGFRRRMRTTNGRAVLKRRRAKGRKVL

Q9LP37 50S ribosomal protein L34, chloroplastic2.6e-3263.23Show/hide
Query:  AAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKV-GVGQGKGRGLVVRAGKAA
        +A S L  P  S G I V  PSASL   TG R       +++  +SA S LLHCSFL SS +S +S FSGLS+  D SS+  G+   + RGLVVRAGKAA
Subjt:  AAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKV-GVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKR+RSRKSLARTHGFRRRMRTT+GRA +KRRRAKGR  LC KSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA

Arabidopsis top hitse value%identityAlignment
AT1G29070.1 Ribosomal protein L341.8e-3363.23Show/hide
Query:  AAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKV-GVGQGKGRGLVVRAGKAA
        +A S L  P  S G I V  PSASL   TG R       +++  +SA S LLHCSFL SS +S +S FSGLS+  D SS+  G+   + RGLVVRAGKAA
Subjt:  AAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKV-GVGQGKGRGLVVRAGKAA

Query:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
        LCQTKR+RSRKSLARTHGFRRRMRTT+GRA +KRRRAKGR  LC KSNPSSGKRA
Subjt:  LCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGATATCAGTATTATCGACCCCATGGGTTTCCACCGGAGCCATTGCCGTCCGCGATCCTTCAGCCTCTCTTGTATTCTCCACTGGTTCTAGAGGTTACTGCTC
CGTATCTCTGAATACCGCAAACAACAATTCTGCCCGTTCTGGACTGCTTCATTGTTCATTTCTTCCATCTTCCTCCCTCTCCTGCTCTTCATCTTTCTCAGGTTTATCTT
TGGGTTTGGATTGGAGCTCTAAGGTTGGGGTCGGACAAGGGAAGGGTCGGGGCTTAGTGGTCAGGGCTGGCAAGGCTGCACTATGTCAGACTAAAAGAAACAGGTCGCGA
AAATCCTTAGCTCGGACTCATGGGTTTCGCAGACGAATGCGAACCACCAATGGTAGAGCTGTTCTCAAACGTAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAATC
CAACCCCAGCAGTGGAAAGCGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGATATCAGTATTATCGACCCCATGGGTTTCCACCGGAGCCATTGCCGTCCGCGATCCTTCAGCCTCTCTTGTATTCTCCACTGGTTCTAGAGGTTACTGCTC
CGTATCTCTGAATACCGCAAACAACAATTCTGCCCGTTCTGGACTGCTTCATTGTTCATTTCTTCCATCTTCCTCCCTCTCCTGCTCTTCATCTTTCTCAGGTTTATCTT
TGGGTTTGGATTGGAGCTCTAAGGTTGGGGTCGGACAAGGGAAGGGTCGGGGCTTAGTGGTCAGGGCTGGCAAGGCTGCACTATGTCAGACTAAAAGAAACAGGTCGCGA
AAATCCTTAGCTCGGACTCATGGGTTTCGCAGACGAATGCGAACCACCAATGGTAGAGCTGTTCTCAAACGTAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAATC
CAACCCCAGCAGTGGAAAGCGTGCTTAA
Protein sequenceShow/hide protein sequence
MAAISVLSTPWVSTGAIAVRDPSASLVFSTGSRGYCSVSLNTANNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAALCQTKRNRSR
KSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA