; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G025540 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G025540
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationchrH02:1874913..1876459
RNA-Seq ExpressionChy2G025540
SyntenyChy2G025540
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]6.56e-9093.66Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANSEDQGWEDMIVDDDDDD+ DNEEIGFVDNERRRRSGLTS RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN
        CSRFHA+SEFDDTKRSCR RLAGHN+RRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]1.66e-9092.96Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDMI+DDDDDDD D EE+GFVDNERRRRSGLT+GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN
        CSRFHAVSEFDDTKRSCR RLAGHN+RRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]4.59e-6571.13Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNE-EIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS DQGW D + +++++++ D++ E+GFV++ER++R+ ++S R G GGGR++VARCQAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNE-EIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST
        QCSRFH+VSEFD+TKRSCRRRLAGHN+RRRK LPDF GQSST
Subjt:  QCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST

XP_023518277.1 squamosa promoter-binding-like protein 3 [Cucurbita pepo subsp. pepo]2.57e-6470.92Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M +S DQGW D + +++++D+ D++EIGFV +ER++R+ ++  R GGGGGR++VARCQAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST
          RFH+VSEFD+TKRSCRRRLAGHN+RRRK LPDF GQSST
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]1.66e-8388.73Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M NSEDQ WEDM+V++DDD+D DNEEIGFV++ERRRRS LT GRGG GGGR TVARCQADGCNADL+ ARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN
        CSRFHAVSEFDDTKRSCRRRLAGHN+RRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein1.6e-6893.66Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANSEDQGWEDMIVDDDDDD+ DNEEIGFVDNERRRRSGLTS RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN
        CSRFHA+SEFDDTKRSCR RLAGHN+RRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN

A0A1S3AZN8 squamosa promoter-binding protein 17.4e-6992.96Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDMI+DDDDDDD D EE+GFVDNERRRRSGLT+GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN
        CSRFHAVSEFDDTKRSCR RLAGHN+RRRKILPDFHGQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN

A0A5A7UDV9 Squamosa promoter-binding protein 18.7e-4692.23Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDMI+DDDDDDD D EE+GFVDNERRRRSGLT+GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSR
        CSR
Subjt:  CSR

A0A6J1EFR3 Squamosa promoter-binding-like protein4.6e-4768.75Show/hide
Query:  MANSEDQGWEDMI---VDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF
        M +S DQGW + +    ++++++D D++EIGFV +ER++R+  +  R G GGGR++V RCQAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRF
Subjt:  MANSEDQGWEDMI---VDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF

Query:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST
        CQQCSRFH+VSEFD+TKRSCRRRLAGHN+RRRK LPDF GQSST
Subjt:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein1.7e-4971.13Show/hide
Query:  MANSEDQGWEDMI-VDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS DQGW D +  +++++++ D++E+GFV++ER++R+ ++S R G GGGR++VARCQAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMI-VDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST
        QCSRFH+VSEFD+TKRSCRRRLAGHN+RRRK LPDF GQSST
Subjt:  QCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 109.4e-2968.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK
        G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFD+ KRSCR+RLA HN+RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK

Q0DAE8 Squamosa promoter-binding-like protein 109.4e-2968.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK
        G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFD+ KRSCR+RLA HN+RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK

Q2R3Y1 Putative squamosa promoter-binding-like protein 199.4e-2965.98Show/hide
Query:  RRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK
        RR R G  SG GGGGGG +    C  DGC +DL+  R YHRRHKVCE HAK  VV++AG EQRFCQQCSRFH ++EFDD K+SCR+RL GHN+RRRK
Subjt:  RRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK

Q38741 Squamosa promoter-binding protein 17.2e-2950.74Show/hide
Query:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M  S+ +G   + +    +   + ++IG  ++ ++ R+   SG+   G   ST   CQ + C A++T A+PYHRRHKVCEFHAKA VV+ +GL+QRFCQQ
Subjt:  MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFH
        CSRFH +SEFD+ KRSCRRRLAGHN+RRRK   D H
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFH

Q9S7P5 Squamosa promoter-binding-like protein 124.6e-2860Show/hide
Query:  GGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST
        GGG  S    CQ D C ADL+  + YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH + EFD+ KRSCRRRLAGHN+RRRK  PD  G  ++
Subjt:  GGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 84.3e-2969.32Show/hide
Query:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK
        G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH +SEFD+ KRSCR+RLA HN+RRRK
Subjt:  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRK

AT1G53160.1 squamosa promoter binding protein-like 48.1e-2853.85Show/hide
Query:  SEDQGW---EDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        S+ QG+   +  +V++D + D D EE   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQ
Subjt:  SEDQGW---EDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRK
        CSRFH + EFD+ KRSCRRRLAGHN+RRRK
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRK

AT1G53160.2 squamosa promoter binding protein-like 48.1e-2853.85Show/hide
Query:  SEDQGW---EDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        S+ QG+   +  +V++D + D D EE   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQ
Subjt:  SEDQGW---EDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRK
        CSRFH + EFD+ KRSCRRRLAGHN+RRRK
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNQRRRK

AT1G76580.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein4.8e-2853.91Show/hide
Query:  DDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRR
        +D++   +      ++ RSG + G GGGGGG     +CQ D C  DL+ A+ YHRRHKVCE H+KA   ++    QRFCQQCSRFH +SEFD+ KRSCRR
Subjt:  DDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRR

Query:  RLAGHNQRRRKILPD
        RL GHN+RRRK  PD
Subjt:  RLAGHNQRRRKILPD

AT3G60030.1 squamosa promoter-binding protein-like 123.3e-2960Show/hide
Query:  GGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST
        GGG  S    CQ D C ADL+  + YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH + EFD+ KRSCRRRLAGHN+RRRK  PD  G  ++
Subjt:  GGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGACGACGACGACGACGATATCGACAACGAAGAAATAGGGTTTGTAGATAATGAGAGGAGG
AGGAGATCTGGTTTAACCAGTGGTCGAGGTGGTGGCGGAGGAGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGCAAGA
CCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCAT
GCAGTATCGGAATTCGATGACACAAAGAGAAGCTGCCGGAGGCGTTTGGCTGGTCACAATCAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCC
ACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGACGACGACGACGACGATATCGACAACGAAGAAATAGGGTTTGTAGATAATGAGAGGAGG
AGGAGATCTGGTTTAACCAGTGGTCGAGGTGGTGGCGGAGGAGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGCAAGA
CCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCAT
GCAGTATCGGAATTCGATGACACAAAGAGAAGCTGCCGGAGGCGTTTGGCTGGTCACAATCAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCC
ACTAATTGA
Protein sequenceShow/hide protein sequence
MANSEDQGWEDMIVDDDDDDDIDNEEIGFVDNERRRRSGLTSGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH
AVSEFDDTKRSCRRRLAGHNQRRRKILPDFHGQSSTN