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Chy2G025990 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G025990
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchrH02:2147304..2147489
RNA-Seq ExpressionChy2G025990
SyntenyChy2G025990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF40912.1 conserved hypothetical protein [Ricinus communis]5.00e-1262.5Show/hide
Query:  MNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQR
        M  ++ +++ RR+SGR IPKRGQVK+GI+VGLA +V SIFSHSHS++R
Subjt:  MNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQR

GAY34397.1 hypothetical protein CUMW_011210 [Citrus unshiu]1.51e-0963.27Show/hide
Query:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ
        ING  + RR+     SGR IPKRGQVKM I+VGLA +V SIFSHSHS +
Subjt:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ

KAA0052717.1 hypothetical protein E6C27_scaffold120G003300 [Cucumis melo var. makuwa]4.36e-3094.74Show/hide
Query:  MGEEAKMMNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQRQH
        MGEEAKMMNNINGQR+GRRISGRLIPKRGQVKMGIMVGLAQTVTSIFS+SHSTQ+QH
Subjt:  MGEEAKMMNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQRQH

KAG7026593.1 Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.57e-1572Show/hide
Query:  MNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQRQH
        MNNING+R+ RRI GR IPKRGQVKMGIMVG+  TVTSIFSH H     H
Subjt:  MNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQRQH

KDO75789.1 hypothetical protein CISIN_1g041404mg [Citrus sinensis]4.31e-0959.18Show/hide
Query:  INGQRMGRRIS-----GRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ
        ING  + +R++     GRLIPKRGQVK+ I+VGLA +V SIFSHSHS +
Subjt:  INGQRMGRRIS-----GRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ

TrEMBL top hitse value%identityAlignment
A0A067G885 Uncharacterized protein4.2e-0559.18Show/hide
Query:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ
        ING  + +R+     +GRLIPKRGQVK+ I+VGLA +V SIFSHSHS +
Subjt:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ

A0A2H5N387 Uncharacterized protein1.9e-0563.27Show/hide
Query:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ
        ING  + RR+     SGR IPKRGQVKM I+VGLA +V SIFSHSHS +
Subjt:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ

A0A5A7UDZ4 Uncharacterized protein9.4e-2194.74Show/hide
Query:  MGEEAKMMNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQRQH
        MGEEAKMMNNINGQR+GRRISGRLIPKRGQVKMGIMVGLAQTVTSIFS+SHSTQ+QH
Subjt:  MGEEAKMMNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQRQH

B9S603 Uncharacterized protein3.5e-0762.5Show/hide
Query:  MNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQR
        M  ++ +++ RR+SGR IPKRGQVK+GI+VGLA +V SIFSHSHS++R
Subjt:  MNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQR

V4W8E8 Uncharacterized protein4.2e-0561.22Show/hide
Query:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ
        ING  + RR+     +GR IPKRGQVKM I+VGLA +V SIFSHSHS +
Subjt:  INGQRMGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGAAGCTAAGATGATGAACAACATCAACGGTCAGAGAATGGGAAGGAGAATTTCTGGGCGTTTGATCCCAAAGAGAGGGCAAGTGAAGATGGGAATC
ATGGTGGGGTTGGCTCAAACTGTCACTTCTATCTTCTCTCACAGTCACAGTACTCAACGACAACATTGTACATCTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGAAGCTAAGATGATGAACAACATCAACGGTCAGAGAATGGGAAGGAGAATTTCTGGGCGTTTGATCCCAAAGAGAGGGCAAGTGAAGATGGGAATC
ATGGTGGGGTTGGCTCAAACTGTCACTTCTATCTTCTCTCACAGTCACAGTACTCAACGACAACATTGTACATCTAGATAG
Protein sequenceShow/hide protein sequence
MGEEAKMMNNINGQRMGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSHSHSTQRQHCTSR