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Chy2G026040 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G026040
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionVID27-like protein
Genome locationchrH02:2185367..2185600
RNA-Seq ExpressionChy2G026040
SyntenyChy2G026040
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052722.1 VID27-like protein [Cucumis melo var. makuwa]2.07e-3787.34Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDE-LIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDS S A  DEMENVCFMWDDE+RDE LIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDE-LIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

TYK13103.1 VID27-like protein [Cucumis melo var. makuwa]2.98e-3988.46Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDS S A  DEMENVCFMWDDE+RDELIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

XP_008441085.2 PREDICTED: VID27-like protein, partial [Cucumis melo]1.59e-3587.34Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDE-LIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDS S A  DEMENVCFMWDDE+RDE LIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDE-LIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

XP_011658193.1 uncharacterized protein LOC105435960 [Cucumis sativus]3.77e-4698.7Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWDDE+RDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
Subjt:  MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

XP_038883304.1 uncharacterized protein LOC120074292 [Benincasa hispida]4.36e-2875.9Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWD--DEERDELIEIALD--KKRVSSEFFQLE--EENLIEIDISPTAFPMFI
        ++ YPSLSLYYPETDSDS   + DEMENVCFMWD  DE+RDELIEI LD  KK+  SEFFQLE  E+NLIEIDISPTAFPMFI
Subjt:  MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWD--DEERDELIEIALD--KKRVSSEFFQLE--EENLIEIDISPTAFPMFI

TrEMBL top hitse value%identityAlignment
A0A0A0KLD5 Uncharacterized protein1.7e-3598.7Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWDDE+RDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
Subjt:  MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

A0A1S3B395 VID27-like protein2.2e-2787.34Show/hide
Query:  MERYPSLSLYYPETDSDSWS-GAEDEMENVCFMWDDEERD-ELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDS S  A DEMENVCFMWDDE+RD ELIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  MERYPSLSLYYPETDSDSWS-GAEDEMENVCFMWDDEERD-ELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

A0A5A7UAD7 VID27-like protein2.2e-2787.34Show/hide
Query:  MERYPSLSLYYPETDSDSWS-GAEDEMENVCFMWDDEERD-ELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDS S  A DEMENVCFMWDDE+RD ELIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  MERYPSLSLYYPETDSDSWS-GAEDEMENVCFMWDDEERD-ELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

A0A5D3CMF2 VID27-like protein9.0e-2988.46Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI
        MERYPSLSLYYPETDSDS S A  DEMENVCFMWDDE+RDELIEIALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  MERYPSLSLYYPETDSDSWSGAE-DEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI

A0A6J1CME6 uncharacterized protein LOC1110124583.8e-1969.88Show/hide
Query:  MERYPSLSLYYPETDSDSWS-------GAEDEMENVCFMWDD-EERDELIEIALD----KKRVSSEFFQLEEENLIEIDISPT
        +ERYPSLSLYYPETDSDS S       GA D ++++CFMWDD E+RDELIEIALD    K + SSE FQLEEENLIEIDISPT
Subjt:  MERYPSLSLYYPETDSDSWS-------GAEDEMENVCFMWDD-EERDELIEIALD----KKRVSSEFFQLEEENLIEIDISPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21500.1 unknown protein1.9e-0741.3Show/hide
Query:  MERYPSLSLYYPETDSDSWSGAEDEM-----------ENVCFMWDDEER----DELIEIALD-----KKRVSSE--FFQLEEENLIEIDISP
        MER+PSLSL YPE+DS+S S +  E            EN+ F W+++E     + LIEI LD     +K +S     F  EE+ LIEID+ P
Subjt:  MERYPSLSLYYPETDSDSWSGAEDEM-----------ENVCFMWDDEER----DELIEIALD-----KKRVSSE--FFQLEEENLIEIDISP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGTATCCTTCTCTGTCGCTGTATTATCCGGAAACGGACTCCGATAGCTGGTCGGGGGCGGAAGATGAGATGGAGAATGTGTGTTTTATGTGGGATGATGAAGA
AAGGGATGAACTCATCGAGATTGCTTTGGATAAGAAGAGAGTATCATCGGAGTTTTTTCAGTTGGAGGAGGAGAATTTGATCGAGATTGATATTTCTCCAACCGCTTTCC
CAATGTTCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGTATCCTTCTCTGTCGCTGTATTATCCGGAAACGGACTCCGATAGCTGGTCGGGGGCGGAAGATGAGATGGAGAATGTGTGTTTTATGTGGGATGATGAAGA
AAGGGATGAACTCATCGAGATTGCTTTGGATAAGAAGAGAGTATCATCGGAGTTTTTTCAGTTGGAGGAGGAGAATTTGATCGAGATTGATATTTCTCCAACCGCTTTCC
CAATGTTCATTTAA
Protein sequenceShow/hide protein sequence
MERYPSLSLYYPETDSDSWSGAEDEMENVCFMWDDEERDELIEIALDKKRVSSEFFQLEEENLIEIDISPTAFPMFI