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Chy2G026110 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G026110
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCHCH domain-containing protein
Genome locationchrH02:2220444..2222195
RNA-Seq ExpressionChy2G026110
SyntenyChy2G026110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134733.1 uncharacterized protein LOC101211873 [Cucumis sativus]5.95e-4365.87Show/hide
Query:  YSGNKFSAGEGQSVKIAEESLR----TVITHAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDW
        Y+ +KF       ++I + +      T  THA+ SGS KG QKRTFLTIEEAGLVE               ISSLNLLKVIAEEEKCSIEELNAGRLCDW
Subjt:  YSGNKFSAGEGQSVKIAEESLR----TVITHAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDW

Query:  FLKDKLKREQNLDSAVLQWDDSDPLF
        FLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  FLKDKLKREQNLDSAVLQWDDSDPLF

XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]1.30e-3974.29Show/hide
Query:  LRTVIT---HAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDD
        LRT  T    AEQ+ S  GAQ+RTFLT+EEAGLVE               ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDD
Subjt:  LRTVIT---HAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDD

Query:  SDPLF
        SDPLF
Subjt:  SDPLF

XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]3.70e-3977.89Show/hide
Query:  AEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEQ+ S  GAQ+RTFLT+EEAGLVE               ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]3.70e-3977.89Show/hide
Query:  AEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEQ+ S  GAQ+RTFLT+EEAGLVE               ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]2.01e-3976.24Show/hide
Query:  TVITHAEQSGSD-KGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPL
        T  T AEQ+GS   GAQ+RTFLTIEEAGLVE               ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPL
Subjt:  TVITHAEQSGSD-KGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPL

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein1.7e-3161.97Show/hide
Query:  SLKESSSSSSSSSSKCYSGNKFSAGEGQSVKIAEESL----RTVITHAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEE
        SLK S+  +   +S  Y+ +KF       ++I + +      T  THA+ SGS KG QKRTFLTIEEAGLVE               ISSLNLLKVIAEE
Subjt:  SLKESSSSSSSSSSKCYSGNKFSAGEGQSVKIAEESL----RTVITHAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEE

Query:  EKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A498K1Q0 Uncharacterized protein1.4e-2550.29Show/hide
Query:  SRAFGQFVTRCIQKTKDQAAKSDPAALKSLKESSSSSSSSSSKCYSGNKFSAGE-GQSVKIAEESLRTVIT---HAEQSG----SDKG----AQKRTFLT
        SR   Q   R +Q  KDQA K   + +KS ++SS +   S+S    G    AG+  + VK AEESLRTV+    H  + G    S KG     ++R FLT
Subjt:  SRAFGQFVTRCIQKTKDQAAKSDPAALKSLKESSSSSSSSSSKCYSGNKFSAGE-GQSVKIAEESLRTVIT---HAEQSG----SDKG----AQKRTFLT

Query:  IEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD
        +EEAGLVE               ISSLNLL+VI+E+E C IEELNAG++CDWF+KDKLKREQNLDSAVLQWDDS+
Subjt:  IEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD

A0A6J1CKG5 uncharacterized protein LOC1110124321.5e-2765.45Show/hide
Query:  SVKIAEESLRTVITHAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAV
        S+ + + + R  +  AEQ+G +  AQ+RTFLT+EEAGLVE               ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAV
Subjt:  SVKIAEESLRTVITHAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAV

Query:  LQWDDSDPLF
        LQWDDSD  F
Subjt:  LQWDDSDPLF

A0A6J1GCY7 uncharacterized protein LOC1114530375.5e-3074.29Show/hide
Query:  LRTVIT---HAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDD
        LRT  T    AEQ+ S  GAQ+RTFLT+EEAGLVE               ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDD
Subjt:  LRTVIT---HAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDD

Query:  SDPLF
        SDPLF
Subjt:  SDPLF

A0A6J1ISV2 uncharacterized protein LOC1114781111.2e-2977.89Show/hide
Query:  AEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEQ+ S  GAQ+RTFLT+EEAGLVE               ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein4.9e-2357.45Show/hide
Query:  THAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD
        T  E+S      ++R+FL++ EAGLVE               ISSLNLL+VI+E+E CSIEELNAG++CDWFLKDKLKRE N++SAVLQWDD D
Subjt:  THAEQSGSDKGAQKRTFLTIEEAGLVE---------------ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGGGCGTTTGGGCAATTCGTGACACGGTGTATACAGAAGACGAAAGATCAGGCTGCGAAGAGCGATCCCGCTGCCTTGAAATCTCTCAAGGAATCTTCTTCTTC
TTCTTCGTCTTCTTCTTCTAAATGCTACTCCGGTAATAAATTCAGCGCTGGTGAGGGCCAGAGTGTTAAGATAGCTGAAGAATCTTTAAGAACTGTCATAACCCACGCCG
AGCAGTCCGGATCAGACAAAGGCGCTCAAAAACGGACTTTCCTGACCATCGAAGAAGCCGGCCTCGTAGAAATATCTTCTCTGAATTTACTGAAAGTGATAGCGGAGGAA
GAGAAATGCTCGATTGAAGAGTTGAATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGATTCTGCTGTTCTTCAATGGGATGA
TTCTGATCCTCTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGGGCGTTTGGGCAATTCGTGACACGGTGTATACAGAAGACGAAAGATCAGGCTGCGAAGAGCGATCCCGCTGCCTTGAAATCTCTCAAGGAATCTTCTTCTTC
TTCTTCGTCTTCTTCTTCTAAATGCTACTCCGGTAATAAATTCAGCGCTGGTGAGGGCCAGAGTGTTAAGATAGCTGAAGAATCTTTAAGAACTGTCATAACCCACGCCG
AGCAGTCCGGATCAGACAAAGGCGCTCAAAAACGGACTTTCCTGACCATCGAAGAAGCCGGCCTCGTAGAAATATCTTCTCTGAATTTACTGAAAGTGATAGCGGAGGAA
GAGAAATGCTCGATTGAAGAGTTGAATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGATTCTGCTGTTCTTCAATGGGATGA
TTCTGATCCTCTTTTCTGA
Protein sequenceShow/hide protein sequence
MSRAFGQFVTRCIQKTKDQAAKSDPAALKSLKESSSSSSSSSSKCYSGNKFSAGEGQSVKIAEESLRTVITHAEQSGSDKGAQKRTFLTIEEAGLVEISSLNLLKVIAEE
EKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF