; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G027730 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G027730
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionheterogeneous nuclear ribonucleoprotein H2 isoform X1
Genome locationchrH02:3089587..3091289
RNA-Seq ExpressionChy2G027730
SyntenyChy2G027730
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134826.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus]1.44e-18999.62Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAK AMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_008440908.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo]2.05e-18999.24Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAK AMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_022133202.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia]3.80e-18597.34Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDR+HIASRPDGKATGEAYVEFASAEEAK AMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_023544122.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo]1.55e-18496.96Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIYDNDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        E+RIHIASRPDGKATGEAYVEFAS E+AK AMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_038882740.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]4.13e-18999.24Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAK AMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJN7 RRM domain-containing protein5.6e-14799.62Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAK AMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A1S4DTH1 heterogeneous nuclear ribonucleoprotein H2 isoform X17.3e-14799.24Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAK AMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1BYF3 heterogeneous nuclear ribonucleoprotein H2 isoform X11.3e-14397.34Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDR+HIASRPDGKATGEAYVEFASAEEAK AMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1EFC5 heterogeneous nuclear ribonucleoprotein H2-like isoform X13.7e-14396.96Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSST GFQPYGYGSFPPTHAFPVVRLRGLPFNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSV KS+IIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFAS EEAK AMSKDKMTIGSRYVELFPST NEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1IJJ3 heterogeneous nuclear ribonucleoprotein H-like isoform X16.4e-14396.96Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGY+VGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIY+NDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        E+RIHIASRPDGKATGEAYVEFASAEEAK AMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

SwissProt top hitse value%identityAlignment
B2RYD2 Epithelial splicing regulatory protein 16.1e-2635.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N           
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG

Query:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPN
               +F  K   E   I+++RGLPF+ T   ++ FFG+       ++ I   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF ST  
Subjt:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

P52597 Heterogeneous nuclear ribonucleoprotein F1.4e-2536.14Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A+ A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q3US41 Epithelial splicing regulatory protein 14.7e-2635.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N           
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG

Query:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPN
               +F  K   E   I+++RGLPF+ T   ++ FFG+       ++ I   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF ST  
Subjt:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F1.0e-2536.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  II+FF   ++  + I +   P+GK TGEA+V+FAS E A+ A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q6NXG1 Epithelial splicing regulatory protein 16.1e-2635.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N           
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG

Query:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPN
               +F  K   E   I+++RGLPF+ T   ++ FFG+       ++ I   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF ST  
Subjt:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-6245.49Show/hide
Query:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG
        G G   DG E+G KRQRM++   P P++    SS   + PYG+ + PP   FP VRLRGLPF+C ++D+ +FF GLD+VDVL V++N +  GEAF V   
Subjt:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG

Query:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFSD--KDQMEYTE
         +QV+FALQ++RQNMGRRYVEVFR  +Q+YY A+A EV    ++                               GS P R   + R SD  K+ +E+T 
Subjt:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFSD--KDQMEYTE

Query:  ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSR
        IL+LRGLPFS  K +I++FF +F+L+ED +H+    +G+ TGEA+VEF +AE+++ AM KD+ T+GSRY+ELFPS+  E   A SR R
Subjt:  ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSR

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.6e-0732.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.6e-0732.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-9767.42Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYG RGAM GSG    GYEVGSKRQRMM+ NPY AV +    F P+GY        FPVVRLRGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE
        VVFAG +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+LK+RGLP+SV K  IIEFF  
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE

Query:  FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        + + + R+ +  RPDGKATGEA+VEF + EEA+ AM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-5565.84Show/hide
Query:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAED
        +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+LK+RGLP+SV K  IIEFF  + + + 
Subjt:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAED

Query:  RIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        R+ +  RPDGKATGEA+VEF + EEA+ AM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  RIHIASRPDGKATGEAYVEFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGACCCAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAG
CAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTCCCTGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATA
TTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCTGTGCAGGTTGAG
TTTGCATTGCAACGGGATCGACAGAATATGGGACGTAGGTATGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTACAACGCTGTTGCTGCAGAAGTAAATTATGAGGG
CATTTATGATAATGACTACCACGGAAGCCCTCCTCCTCGACAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACCGAGATACTGAAACTTCGTGGTCTCCCCTTCT
CTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTTGCAGAAGATAGGATACATATTGCAAGTCGCCCAGATGGGAAGGCTACCGGAGAGGCCTATGTG
GAGTTTGCTTCAGCAGAGGAGGCAAAGGGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGATACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCAAGAAGAGC
TGAGTCAAGGTCAAGACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGACCCAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAG
CAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTCCCTGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATA
TTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCTGTGCAGGTTGAG
TTTGCATTGCAACGGGATCGACAGAATATGGGACGTAGGTATGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTACAACGCTGTTGCTGCAGAAGTAAATTATGAGGG
CATTTATGATAATGACTACCACGGAAGCCCTCCTCCTCGACAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACCGAGATACTGAAACTTCGTGGTCTCCCCTTCT
CTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTTGCAGAAGATAGGATACATATTGCAAGTCGCCCAGATGGGAAGGCTACCGGAGAGGCCTATGTG
GAGTTTGCTTCAGCAGAGGAGGCAAAGGGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGATACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCAAGAAGAGC
TGAGTCAAGGTCAAGACAGTAA
Protein sequenceShow/hide protein sequence
MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVE
FALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYV
EFASAEEAKGAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ