; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G028000 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G028000
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionserine/arginine-rich splicing factor SR45a
Genome locationchrH02:3204436..3207192
RNA-Seq ExpressionChy2G028000
SyntenyChy2G028000
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647621.1 hypothetical protein Csa_003197 [Cucumis sativus]2.56e-15397.12Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
        ADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-DRGS-RYRGSG-SFREDYGHRRSPRRSPYRGAR
        TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG DRGS RYRG G SFREDYG+RRSPRRSPYRGAR
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-DRGS-RYRGSG-SFREDYGHRRSPRRSPYRGAR

Query:  EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY RGSR
Subjt:  EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

XP_016899368.1 PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo]4.21e-16097.5Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
        ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HANNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPR
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYS
        TRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRG GSFREDYG+RRSPRRSPYRGAREYS
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYS

Query:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY RGSR
Subjt:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

XP_022950652.1 serine/arginine-rich splicing factor SR45a [Cucurbita moschata]6.53e-14393.8Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        AD HRKRYSRSPSPWRAPSRSRSRSRSR  PRSRSRSWSRPRS SRGRSRSRSRGR E+ NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEP
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRG GSFREDYGHRRSPRRSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREY

Query:  SPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        SPRHSPP YGGGRSRRDHSRSPP YSP  GGSPDRRY RGSR
Subjt:  SPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

XP_031743118.1 serine/arginine-rich splicing factor SR45a [Cucumis sativus]3.54e-15597.12Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
        ADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-DRGS-RYRGSG-SFREDYGHRRSPRRSPYRGAR
        TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG DRGS RYRG G SFREDYG+RRSPRRSPYRGAR
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-DRGS-RYRGSG-SFREDYGHRRSPRRSPYRGAR

Query:  EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY RGSR
Subjt:  EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

XP_038881911.1 serine/arginine-rich splicing factor SR45a [Benincasa hispida]4.83e-15094.61Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
        AD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HA+NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYS
        TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRD+GYRGDRGSRYRG GSFR+DYG+RRSPRRSPYRGAREYS
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYS

Query:  P-RHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        P RHSPPYGG RSRRDHSRSPP   PPYGGSPDRRY RGSR
Subjt:  P-RHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

TrEMBL top hitse value%identityAlignment
A0A0A0KMM4 RRM domain-containing protein3.7e-12197.12Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
        ADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GSGSFREDYGHRRSPRRSPYRGAR
        TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG SRYR G GSFREDYG+RRSPRRSPYRGAR
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GSGSFREDYGHRRSPRRSPYRGAR

Query:  EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY RGSR
Subjt:  EYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

A0A1S4DTT1 serine/arginine-rich splicing factor SR45a7.2e-12597.5Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
        ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HANNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPR
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYS
        TRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRG GSFREDYG+RRSPRRSPYRGAREYS
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYS

Query:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY RGSR
Subjt:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

A0A6J1BUT3 serine/arginine-rich splicing factor SR45a isoform X18.9e-10791.32Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
        AD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR+HA N GNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYR-GSGSFREDYGHRRSPRRSPYRGAREY
        TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG RY  G GSFREDYG+RRSPRRSPYRGAREY
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYR-GSGSFREDYGHRRSPRRSPYRGAREY

Query:  SPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY-ARGSR
            SPPY GGRSRR+HSRS PPYSPPY GSPDRRY  RG+R
Subjt:  SPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY-ARGSR

A0A6J1GFF0 serine/arginine-rich splicing factor SR45a9.1e-11293.8Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        AD HRKRYSRSPSPWRAP  SRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR E+ NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEP
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRG GSFREDYGHRRSPRRSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREY

Query:  SPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        SPRHS PPYGGGRSRRDHSRS PPYSP  GGSPDRRY RGSR
Subjt:  SPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

A0A6J1INV2 serine/arginine-rich splicing factor SR45a9.1e-11293.8Show/hide
Query:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        AD HRKRYSRSPSPWRAP  SRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR E+ NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEP
Subjt:  ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRG GSFREDYGHRRSPRRSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREY

Query:  SPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR
        SPRHS PPYGGGRSRRDHSRS PPYSP  GGSPDRRY RGSR
Subjt:  SPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR

SwissProt top hitse value%identityAlignment
P62995 Transformer-2 protein homolog beta3.3e-1842.51Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D   R    G    DY + RS R
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR

Query:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY
                +R A++    Y  R   PY   GG RSR R  S SP  Y
Subjt:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY

P62996 Transformer-2 protein homolog beta3.3e-1842.51Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D   R    G    DY + RS R
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR

Query:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY
                +R A++    Y  R   PY   GG RSR R  S SP  Y
Subjt:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY

P62997 Transformer-2 protein homolog beta3.3e-1842.51Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D   R    G    DY + RS R
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR

Query:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY
                +R A++    Y  R   PY   GG RSR R  S SP  Y
Subjt:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY

Q3ZBT6 Transformer-2 protein homolog beta3.3e-1842.51Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D   R    G    DY + RS R
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPR

Query:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY
                +R A++    Y  R   PY   GG RSR R  S SP  Y
Subjt:  -----RSPYRGARE----YSPRHSPPY---GGGRSR-RDHSRSPPPY

Q84TH4 Serine/arginine-rich splicing factor SR45a9.6e-3448.07Show/hide
Query:  PSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-------EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFV
        P R  +RS      RSR      P    RGRS SRS  R         A NPGN+LYVTGLS RVTERDLE+HF+KEGKV    LV++P TR SRGF F+
Subjt:  PSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-------EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFV

Query:  TMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS--------------------TRDSGYRGDRGSRYRGSGSFREDYGHR-RSPR
        +M +V DANRC++ L+ S+L+GR ITVEK+RR+R RTPTPG YLGL++                    +R   Y  DRG  Y  S      YG R RS  
Subjt:  TMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS--------------------TRDSGYRGDRGSRYRGSGSFREDYGHR-RSPR

Query:  RSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSP
         SP YR  R YSP  SP P      RRD S SP
Subjt:  RSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSP

Arabidopsis top hitse value%identityAlignment
AT4G35785.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-6467.22Show/hide
Query:  RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE
        R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRG E   NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+E
Subjt:  RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE

Query:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGARE
        PRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G R S  RG    R+DY  RRSPR       R+
Subjt:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGARE

Query:  YSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGS
        YSPR        RSRRD S S      P+G SP+RR  R S
Subjt:  YSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGS

AT4G35785.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-6667.22Show/hide
Query:  RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE
        R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRGR    NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+E
Subjt:  RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE

Query:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGARE
        PRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G R S  RG    R+DY  RRSPR       R+
Subjt:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGARE

Query:  YSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGS
        YSPR        RSRRD S S      P+G SP+RR  R S
Subjt:  YSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGS

AT4G35785.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-4675.89Show/hide
Query:  RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE
        R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRGR    NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+E
Subjt:  RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE

Query:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        PRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK

AT4G35785.4 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-4268.59Show/hide
Query:  RKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEH
        R+R SRSPSP   RA SRSRSRSRSRSRP  RSRSRS  RP SPSR                  RSRSRSRG E   NPG TLYVTGLSTRVT++DLE H
Subjt:  RKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEH

Query:  FSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        F+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  FSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK

AT4G35785.5 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-4268.59Show/hide
Query:  RKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEH
        R+R SRSPSP   RA SRSRSRSRSRSRP  RSRSRS  RP SPSR                  RSRSRSRG E   NPG TLYVTGLSTRVT++DLE H
Subjt:  RKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEH

Query:  FSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        F+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  FSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGAGAGCTCCTTCAAGATCAAGATCCAGATCTAGATCACGATCGAGGCCCAGGTCCAGGTC
CAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTAT
CTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCA
TTTGTTACAATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAATCGATTCTAGAAGGTCGATACATAACTGTGGAGAAGTCACGGAGAAAACGGCC
AAGAACTCCAACGCCAGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTATCGTGGCGATCGAGGTAGTAGGTATCGTGGAAGTGGCTCCTTCCGTGAAGACT
ATGGGCATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGG
TCGCCGCCACCTTACTCCCCTCCTTACGGCGGCAGCCCGGATAGGAGGTATGCCCGTGGCTCTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGAGAGCTCCTTCAAGATCAAGATCCAGATCTAGATCACGATCGAGGCCCAGGTCCAGGTC
CAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTAT
CTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCA
TTTGTTACAATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAATCGATTCTAGAAGGTCGATACATAACTGTGGAGAAGTCACGGAGAAAACGGCC
AAGAACTCCAACGCCAGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTATCGTGGCGATCGAGGTAGTAGGTATCGTGGAAGTGGCTCCTTCCGTGAAGACT
ATGGGCATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGG
TCGCCGCCACCTTACTCCCCTCCTTACGGCGGCAGCCCGGATAGGAGGTATGCCCGTGGCTCTAGGTGA
Protein sequenceShow/hide protein sequence
MQADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFA
FVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSR
SPPPYSPPYGGSPDRRYARGSR