; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G028540 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G028540
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionHistone H1
Genome locationchrH02:3560160..3560866
RNA-Seq ExpressionChy2G028540
SyntenyChy2G028540
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647604.1 hypothetical protein Csa_003640 [Cucumis sativus]5.71e-10992.75Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAAEVKVPA          TEE KEVEKPVKEKKPRATREKKPRQ KVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK
        LALQLKNSTAKGKLTKIKASYKLSETGKKKD NATKVAKANAEKKTKQARTTRTTGRKRK VKTEEAVSKAVKKVV KKPKRSTPAKPKQPKSIKSPAAK
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK

Query:  RAKKAVV
        RAKKAVV
Subjt:  RAKKAVV

KAG7034103.1 hypothetical protein SDJN02_03830 [Cucurbita argyrosperma subsp. argyrosperma]1.92e-9081.34Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEA EVKVP ED   +EVP+ EETKE EKPV+EKK R +REKKPRQ KVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKA---VKKVVPKKPKRSTPAKPKQPKSIKSP
        LALQLKNSTAKGKL K+KASY+LSE GKK DK A+KVAKANAEKKTKQARTTR T  KRK    +EA SKA   VKKVV KKPKR+TPAKPKQPKSI+SP
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKA---VKKVVPKKPKRSTPAKPKQPKSIKSP

Query:  AAKRAKKAV
        AAKRAKKAV
Subjt:  AAKRAKKAV

XP_004134874.1 histone H1 [Cucumis sativus]1.01e-11897.1Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAAEVKVPAEDVAP+EVPATEE KEVEKPVKEKKPRATREKKPRQ KVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK
        LALQLKNSTAKGKLTKIKASYKLSETGKKKD NATKVAKANAEKKTKQARTTRTTGRKRK VKTEEAVSKAVKKVV KKPKRSTPAKPKQPKSIKSPAAK
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK

Query:  RAKKAVV
        RAKKAVV
Subjt:  RAKKAVV

XP_008440801.1 PREDICTED: histone H1 [Cucumis melo]2.26e-11394.71Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEV-PATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        M+STGEAAEVKVPAEDVAP+EV PATEE KEVEKPVKEKKPRA REKKPRQ KVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGEAAEVKVPAEDVAPLEV-PATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAA
        ILALQLKNSTAKGKLTKIKASYKLSE GKKKDKNATKVAKANAEK TKQARTTRTTGRKRK VK EEAVSKAVKKVV KKPKRSTPAKPKQPKSIKSPAA
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAA

Query:  KRAKKAVV
        KRAKKAVV
Subjt:  KRAKKAVV

XP_038883821.1 histone H1 [Benincasa hispida]6.70e-10489.52Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKP-VKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MSS GEA EVKVPAEDV P+ VPA EE KE EKP VKEKKPRA REKKPRQ KVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKP-VKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKA---VKKVVPKKPKRSTPAKPKQPKSIKS
        IL+LQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRK VK +EA SKA   VKKVV KKPKRSTPAKPK PKSI+S
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKA---VKKVVPKKPKRSTPAKPKQPKSIKS

Query:  PAAKRAKKAV
        PAAKRAKKAV
Subjt:  PAAKRAKKAV

TrEMBL top hitse value%identityAlignment
A0A0A0KJB6 Histone H16.9e-9297.1Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAAEVKVPAEDVAP+EVPATEE KEVEKPVKEKKPRATREKKPRQ KVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK
        LALQLKNSTAKGKLTKIKASYKLSETGKKKD NATKVAKANAEKKTKQARTTRTTGRKRK VKTEEAVSKAVKKVV KKPKRSTPAKPKQPKSIKSPAAK
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK

Query:  RAKKAVV
        RAKKAVV
Subjt:  RAKKAVV

A0A1S3B1Z2 histone H17.9e-8894.71Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLE-VPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        M+STGEAAEVKVPAEDVAP+E VPATEE KEVEKPVKEKKPRA REKKPRQ KVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGEAAEVKVPAEDVAPLE-VPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAA
        ILALQLKNSTAKGKLTKIKASYKLSE GKKKDKNATKVAKANAEK TKQARTTRTTGRKRK VK EEAVSKAVKKVV KKPKRSTPAKPKQPKSIKSPAA
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAA

Query:  KRAKKAVV
        KRAKKAVV
Subjt:  KRAKKAVV

A0A5A7SK97 Histone H17.9e-8894.71Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLE-VPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        M+STGEAAEVKVPAEDVAP+E VPATEE KEVEKPVKEKKPRA REKKPRQ KVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGEAAEVKVPAEDVAPLE-VPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAA
        ILALQLKNSTAKGKLTKIKASYKLSE GKKKDKNATKVAKANAEK TKQARTTRTTGRKRK VK EEAVSKAVKKVV KKPKRSTPAKPKQPKSIKSPAA
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAA

Query:  KRAKKAVV
        KRAKKAVV
Subjt:  KRAKKAVV

A0A6J1GFQ2 histone H17.4e-7082.04Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGE AEVKVPAED   +EVP+ EETKE EKPV+EKK R  REKKPRQ KVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEKKTKQARTTR T  KRK     +A +KA+KKVV KKPKR+TPAKPKQPKSI+SPAAK
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAK

Query:  RAKKAV
        RAKKAV
Subjt:  RAKKAV

A0A6J1IMR2 histone H11.4e-6880.86Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGE  EVKVPAED    EVP+ EE KE EKPV+EKK R  REKKPRQ KVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVS---KAVKKVVPKKPKRSTPAKPKQPKSIKSP
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEK TKQARTTR T  KRK    +EA S   KAVKKVV KKPKR+TPAKPKQPKSI+SP
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVS---KAVKKVVPKKPKRSTPAKPKQPKSIKSP

Query:  AAKRAKKAV
        AAKRAKKAV
Subjt:  AAKRAKKAV

SwissProt top hitse value%identityAlignment
P08283 Histone H17.5e-1946.52Show/hide
Query:  EVPATEETK-EVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA
        EVP  EE K EVEK  K K  +  +  KPR P  ASHP Y +MI +AI SL EKNGSS YAIAK++EEK K  LPANF+K+L   LK + A GKL K+K 
Subjt:  EVPATEETK-EVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA

Query:  SYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKRAKKAV
        S+KLS   KK    A    KA    K K  +       K K V   +  SKA  K V  KPK++  AKPK   +   P A + K  V
Subjt:  SYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKRAKKAV

P23444 Histone H12.4e-1741.55Show/hide
Query:  EAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQL
        +  E   P  D AP E PA             K  +AT  KK   P   +H PY +M++EAI+SL E+ GSS YAIAK++E+KHKA LP NFRK+L +QL
Subjt:  EAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQL

Query:  KNSTAKGKLTKIKASYKLSETGK--KKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKP-----KRSTPAKPKQPKSIKSPA
        K   A GKLTK+K SYKLS   K   K K A K  K  A+K    A+    T  K K     +  +K    V PK P     K +  AKPK   +   P 
Subjt:  KNSTAKGKLTKIKASYKLSETGK--KKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKP-----KRSTPAKPKQPKSIKSPA

Query:  AKRAKKA
        AK+A +A
Subjt:  AKRAKKA

P27806 Histone H11.1e-1738.84Show/hide
Query:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVA-SHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MS+   AA++ VP  +VA      T   K  + P   K  ++T    P++P+V  +HP Y +M++EAI++L E++GSS  AI K++E+KHKA LPANFRK
Subjt:  MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVA-SHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLS--------ETGKKKDKNATKVAKANAEK-------KTKQARTTRTTGRKRKVV---------------KTEEAVS
        IL  Q+K   A GKLTK+K SYKL+        +T  KK   A   AKA A+K       K   A+       K K V               K + A  
Subjt:  ILALQLKNSTAKGKLTKIKASYKLS--------ETGKKKDKNATKVAKANAEK-------KTKQARTTRTTGRKRKVV---------------KTEEAVS

Query:  KAVKKVVPKKP-------KRSTPAKPKQPKSIKSPAAKRAKK
        KA     PKKP       KR+TP K   P   K PAAK+AKK
Subjt:  KAVKKVVPKKP-------KRSTPAKPKQPKSIKSPAAKRAKK

P40267 Histone H11.1e-4358.42Show/hide
Query:  EVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNS
        EV+ P     P E    +E    + P  +KKPRA +EKKP+  K  +HPPYFQMI EA+ +LNEK GSSPYA+AKYME+KHK  LPANFRKIL LQLKNS
Subjt:  EVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNS

Query:  TAKGKLTKIKASYKLSETGKKKDKNAT---KVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKRAKKA
         AKGKL KIKASYKLSE GKK+    T   K+ KA+++KK +  R T T  +K +V K  +A  K  KKV  K+ ++STPAK KQPKSIKSPAAKRAKK 
Subjt:  TAKGKLTKIKASYKLSETGKKKDKNAT---KVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKRAKKA

Query:  VV
         V
Subjt:  VV

Q08864 Histone H1-I1.9e-1438.53Show/hide
Query:  MSSTGEAAEVKVPAEDVAP------LEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVL
        MS T EAA V  PA + AP       + P  +  K+ + P   K+P+A +EKKP+     +HPPY +M+ +AI++L E+NGSS  A+ K++E K+ K + 
Subjt:  MSSTGEAAEVKVPAEDVAP------LEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVL

Query:  PANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNAT-KVAKANAEKKTKQAR--------TTRTTGRKRKVVKTEEAVSKAV--KKVVPK--KP
          NF K L+  +K     GKL K+K S+KLSE  K K K +T K AKA+ E K K++           +T   K KV + ++   + V  KK  PK  KP
Subjt:  PANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNAT-KVAKANAEKKTKQAR--------TTRTTGRKRKVVKTEEAVSKAV--KKVVPK--KP

Query:  KR-STP-------AKPKQPKSIKSPAAKRAK
        K+ +TP       A PK   + KSPA K AK
Subjt:  KR-STP-------AKPKQPKSIKSPAAKRAK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein2.0e-1440.91Show/hide
Query:  PAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKG
        P  D A  + PA +  K   K VKE K + T    P++  V+SHP Y +MI +AI +L E+ GSS YAI K++EEK K  LP  FRK+L L LK   A G
Subjt:  PAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKG

Query:  KLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPK----RSTPAKPKQPKSIKSPAAKRAKKAV
        KL K+KAS+KL     K   ++ K A   +    K+  T   T  KRKV     A SKA KK +  KPK    +   AK K     ++ AA   +KAV
Subjt:  KLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPK----RSTPAKPKQPKSIKSPAAKRAKKAV

AT2G18050.1 histone H1-32.6e-2750Show/hide
Query:  EKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKD
        E  + +K P A   KKPR+PK  +HPPYFQMI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T K   
Subjt:  EKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKD

Query:  KNATKVAKANAEKKTKQ--ARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKR
        +   K  K N +++ K+   RT  ++ R +K V             V K+ K+    K +QPKSIKS   K+
Subjt:  KNATKVAKANAEKKTKQ--ARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKR

AT2G18050.2 histone H1-36.9e-2049.3Show/hide
Query:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQ--ARTTRTTGRKR
        MI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T K   +   K  K N +++ K+   RT  ++ R +
Subjt:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQ--ARTTRTTGRKR

Query:  KVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKR
        K V             V K+ K+    K +QPKSIKS   K+
Subjt:  KVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKR

AT2G30620.1 winged-helix DNA-binding transcription factor family protein1.0e-1040.43Show/hide
Query:  TEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKL-
        T   K  +KPVK   P  T++K       +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L + LK   A  KL K+KAS+K+ 
Subjt:  TEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKL-

Query:  ---SETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKV-VPKKPK-RSTPAKPKQPKSIKSPAAKRAKKAV
           S    K      K A   A+ K K A        K     T++  +K V K  V  KPK + T AKPK     KS AA    KAV
Subjt:  ---SETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKV-VPKKPK-RSTPAKPKQPKSIKSPAAKRAKKAV

AT2G30620.2 winged-helix DNA-binding transcription factor family protein7.0e-1242.44Show/hide
Query:  TEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKL-
        T   K  +KPVK   P  T++K       +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L + LK   A  KL K+KAS+K+ 
Subjt:  TEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKL-

Query:  SETGKKKDKNATKV-AKANAEKKTKQART-TRTT-GRK-----RKVVKTEEAVSKAVKKVVPKKPKRSTPAK
        S       K A  V  KA    K K +RT TRT+ G+K     +KV  T++A +K+VK   P K   +  AK
Subjt:  SETGKKKDKNATKV-AKANAEKKTKQART-TRTT-GRK-----RKVVKTEEAVSKAVKKVVPKKPKRSTPAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGACGGGAGAGGCTGCAGAAGTGAAAGTTCCGGCGGAGGATGTCGCTCCTCTGGAGGTTCCGGCTACGGAGGAGACGAAGGAGGTAGAGAAGCCGGTGAAGGA
GAAGAAACCTAGAGCTACGAGGGAGAAGAAGCCTAGACAACCTAAAGTTGCTTCACATCCACCGTATTTTCAGATGATCAATGAAGCAATCTCGTCACTCAACGAGAAGA
ATGGATCGAGTCCGTACGCCATAGCGAAATACATGGAGGAAAAACACAAGGCGGTTCTTCCAGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCCACAGCT
AAAGGAAAATTAACGAAGATCAAGGCATCGTATAAGCTATCCGAAACAGGAAAGAAAAAGGACAAGAACGCAACGAAAGTCGCAAAAGCGAACGCCGAGAAGAAAACAAA
ACAAGCAAGAACGACGAGAACTACTGGAAGGAAGAGGAAGGTGGTGAAGACGGAGGAGGCGGTGAGTAAGGCGGTGAAGAAGGTTGTTCCAAAGAAACCGAAAAGGTCTA
CCCCGGCGAAGCCAAAACAGCCGAAATCAATTAAGTCTCCTGCAGCGAAGAGGGCTAAAAAAGCAGTTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGACGGGAGAGGCTGCAGAAGTGAAAGTTCCGGCGGAGGATGTCGCTCCTCTGGAGGTTCCGGCTACGGAGGAGACGAAGGAGGTAGAGAAGCCGGTGAAGGA
GAAGAAACCTAGAGCTACGAGGGAGAAGAAGCCTAGACAACCTAAAGTTGCTTCACATCCACCGTATTTTCAGATGATCAATGAAGCAATCTCGTCACTCAACGAGAAGA
ATGGATCGAGTCCGTACGCCATAGCGAAATACATGGAGGAAAAACACAAGGCGGTTCTTCCAGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCCACAGCT
AAAGGAAAATTAACGAAGATCAAGGCATCGTATAAGCTATCCGAAACAGGAAAGAAAAAGGACAAGAACGCAACGAAAGTCGCAAAAGCGAACGCCGAGAAGAAAACAAA
ACAAGCAAGAACGACGAGAACTACTGGAAGGAAGAGGAAGGTGGTGAAGACGGAGGAGGCGGTGAGTAAGGCGGTGAAGAAGGTTGTTCCAAAGAAACCGAAAAGGTCTA
CCCCGGCGAAGCCAAAACAGCCGAAATCAATTAAGTCTCCTGCAGCGAAGAGGGCTAAAAAAGCAGTTGTGTGA
Protein sequenceShow/hide protein sequence
MSSTGEAAEVKVPAEDVAPLEVPATEETKEVEKPVKEKKPRATREKKPRQPKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTA
KGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKVVKTEEAVSKAVKKVVPKKPKRSTPAKPKQPKSIKSPAAKRAKKAVV