; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G030280 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G030280
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein SKIP34
Genome locationchrH02:4716146..4716648
RNA-Seq ExpressionChy2G030280
SyntenyChy2G030280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647547.1 hypothetical protein Csa_002974 [Cucumis sativus]9.58e-5197.7Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHRP FRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSD QEYVI
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

XP_008440533.1 PREDICTED: protein SKIP34 [Cucumis melo]4.05e-4994.25Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHRP FRGS PPYQTSVPENGA SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSD QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

XP_011657944.1 protein SKIP34 [Cucumis sativus]8.53e-5196.55Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHRP FRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSD QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

XP_022950522.1 protein SKIP34 [Cucurbita moschata]2.86e-4084.09Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGA-VSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHR  FRGS+ P QTSVPENG   SVVDNLRGRL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSD QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGA-VSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

XP_038882165.1 protein SKIP34 [Benincasa hispida]9.45e-4589.53Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYV
        MCNGHHR  FRGSL PYQ S+PENG  SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQY+D QEYV
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYV

TrEMBL top hitse value%identityAlignment
A0A0A0KIR5 Uncharacterized protein4.4e-3896.55Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHRP FRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSD QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

A0A1S3B1B8 protein SKIP348.3e-3794.25Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHRP FRGS PPYQTSVPENGA SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSD QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

A0A5D3CN14 Protein SKIP348.3e-3794.25Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHRP FRGS PPYQTSVPENGA SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSD QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

A0A6J1GF20 protein SKIP344.4e-3084.09Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGA-VSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHR  FRGS+ P QTSVPENG   SVVDNLRGRL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSD QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGA-VSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

A0A6J1IV54 protein SKIP345.8e-3081.61Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI
        MCNGHHR  FRGS+ P QTSVPENG  SVVDNLRGRL ETE RLAQVRAREA LSR+LEEMKRLVSVMEIL+NYLKR+Y D QEYV+
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVI

SwissProt top hitse value%identityAlignment
Q8GWU7 Protein SKIP346.8e-1248.84Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYV
        MC GH++     S    ++   E+   SVVD+LR RL ETE RL + RAREAELSR LE MKR VSVMEI+E +L+R++ + ++ +
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYV

Arabidopsis top hitse value%identityAlignment
AT5G65495.1 unknown protein4.9e-1348.84Show/hide
Query:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYV
        MC GH++     S    ++   E+   SVVD+LR RL ETE RL + RAREAELSR LE MKR VSVMEI+E +L+R++ + ++ +
Subjt:  MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAACGGTCACCACCGACCATTTTTCAGAGGTAGCCTTCCTCCCTACCAGACCTCCGTACCGGAAAACGGCGCCGTATCCGTTGTGGACAACCTACGGGGTCGATT
AGAGGAAACCGAGTTGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAGGAAATGAAACGATTAGTATCTGTGATGGAGATCCTCGAGAACT
ACCTGAAGCGGCAGTACAGCGACCATCAAGAATATGTGATTGTAATCGCCACCAAATGTATGGATTTATTCCCCCTAGATTTCACTTGTGAATGGAATCGTGGAATCGAT
ACCGTTAGAATCGAGGGGGATTTTCAGTTTTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAACGGTCACCACCGACCATTTTTCAGAGGTAGCCTTCCTCCCTACCAGACCTCCGTACCGGAAAACGGCGCCGTATCCGTTGTGGACAACCTACGGGGTCGATT
AGAGGAAACCGAGTTGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAGGAAATGAAACGATTAGTATCTGTGATGGAGATCCTCGAGAACT
ACCTGAAGCGGCAGTACAGCGACCATCAAGAATATGTGATTGTAATCGCCACCAAATGTATGGATTTATTCCCCCTAGATTTCACTTGTGAATGGAATCGTGGAATCGAT
ACCGTTAGAATCGAGGGGGATTTTCAGTTTTTTGAATGA
Protein sequenceShow/hide protein sequence
MCNGHHRPFFRGSLPPYQTSVPENGAVSVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDHQEYVIVIATKCMDLFPLDFTCEWNRGID
TVRIEGDFQFFE