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Chy2G032210 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G032210
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionthioredoxin-like protein HCF164, chloroplastic
Genome locationchrH02:6327762..6328494
RNA-Seq ExpressionChy2G032210
SyntenyChy2G032210
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016671 - oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily
IPR044241 - Thiol:disulfide interchange protein TxlA/HCF164


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12934.1 thioredoxin-like protein [Cucumis melo var. makuwa]3.43e-10495.18Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

XP_004141943.1 thioredoxin-like protein HCF164, chloroplastic [Cucumis sativus]2.56e-10695.78Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFAPSNSI LHRIPLCFRIPHPLLQPSAARFPSS RRFPP ACQTLPESHDTTSA EKSS GPES GDTTGQAASSSSNQGFPEFPNKDINRRVAI+S
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

XP_008440187.2 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis melo]2.86e-10191.86Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

XP_008440188.2 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucumis melo]9.41e-10495.18Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

XP_016899240.1 PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis melo]1.46e-10191.86Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

TrEMBL top hitse value%identityAlignment
A0A0A0KG26 Thioredoxin domain-containing protein1.4e-8295.78Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFAPSNSI LHRIPLCFRIPHPLLQPSAARFPSS RRFPP ACQTLPESHDTTSA EKSS GPES GDTTGQAASSSSNQGFPEFPNKDINRRVAI+S
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

A0A1S3B0J9 thioredoxin-like protein HCF164, chloroplastic isoform X24.4e-8195.18Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

A0A1S4DTC4 thioredoxin-like protein HCF164, chloroplastic isoform X14.1e-7991.86Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

A0A1S4DU52 thioredoxin-like protein HCF164, chloroplastic isoform X44.1e-7991.86Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

A0A5D3CPH8 Thioredoxin-like protein4.4e-8195.18Show/hide
Query:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS
        MARFA SNSITLHRIPL  RIPHPLLQPSAARFPSSRRRFPP ACQTLPESHDT+SA EKSS GPESAGDTTGQAASSSSNQGFPEFPNKDINRR+AIIS
Subjt:  MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIIS

Query:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
Subjt:  TVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

SwissProt top hitse value%identityAlignment
O23166 Thioredoxin-like protein HCF164, chloroplastic4.0e-3962.69Show/hide
Query:  RFPPFACQTLPESHDTTSAL------EKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEA
        RF    C+  PES +T          E SS   E    ++   +SSSS+ GFPE PNKDINRRVA ++ ++AL+LF S+RLDFG+SLKDL A+ALPYEEA
Subjt:  RFPPFACQTLPESHDTTSAL------EKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEA

Query:  LSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        LSNGKPTVVEFYADWCEVCRELAPDVYK+EQQ+K
Subjt:  LSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

P09102 Protein disulfide-isomerase2.5e-0438.03Show/hide
Query:  VAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        VA++  V+AL L      + GV    L   A  +E+AL+  +  +VEFYA WC  C+ LAP+  K   Q K
Subjt:  VAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

P35088 Thiol:disulfide interchange protein TxlA9.0e-0734.29Show/hide
Query:  VAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQF
        +A    ++ L +  S +     SL  LA  A PYE A++N +P ++EFYADWC  C+ +A  +  ++Q +
Subjt:  VAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQF

P73920 Thiol:disulfide interchange protein TxlA homolog3.3e-0936.71Show/hide
Query:  PNKDINRRVAIISTVSALALFSSSRLDF-GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQF
        P K  N  +A+++   + A++   +    G+SL+  A  A+P   AL NG+PT+VEFYADWC  C+ +APD+ ++++ +
Subjt:  PNKDINRRVAIISTVSALALFSSSRLDF-GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQF

Q7Y0D4 Thioredoxin-like protein HCF164, chloroplastic1.3e-3459.26Show/hide
Query:  SRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTT---GQAASSSSNQGFPEFPNKDINRRVAIISTVSALALFSSSRLDF-GVSLKDLAAAALPYEE
        +RRR    +C   P+S       E  +  P +  D+T    +A+S+S + G P FPNKD++RR+A+ ST+ A+ LF+  RLDF GVSLKDLAA A PYEE
Subjt:  SRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTT---GQAASSSSNQGFPEFPNKDINRRVAIISTVSALALFSSSRLDF-GVSLKDLAAAALPYEE

Query:  ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ+K
Subjt:  ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

Arabidopsis top hitse value%identityAlignment
AT2G47470.1 thioredoxin family protein5.6e-0442.11Show/hide
Query:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        +E+ +   K  +VEFYA WC  C++LAP+  K+   FK
Subjt:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

AT2G47470.2 thioredoxin family protein5.6e-0442.11Show/hide
Query:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        +E+ +   K  +VEFYA WC  C++LAP+  K+   FK
Subjt:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

AT2G47470.3 thioredoxin family protein5.6e-0442.11Show/hide
Query:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        +E+ +   K  +VEFYA WC  C++LAP+  K+   FK
Subjt:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

AT2G47470.4 thioredoxin family protein5.6e-0442.11Show/hide
Query:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        +E+ +   K  +VEFYA WC  C++LAP+  K+   FK
Subjt:  YEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK

AT4G37200.1 Thioredoxin superfamily protein2.8e-4062.69Show/hide
Query:  RFPPFACQTLPESHDTTSAL------EKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEA
        RF    C+  PES +T          E SS   E    ++   +SSSS+ GFPE PNKDINRRVA ++ ++AL+LF S+RLDFG+SLKDL A+ALPYEEA
Subjt:  RFPPFACQTLPESHDTTSAL------EKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIISTVSALALFSSSRLDFGVSLKDLAAAALPYEEA

Query:  LSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK
        LSNGKPTVVEFYADWCEVCRELAPDVYK+EQQ+K
Subjt:  LSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGCTTTGCTCCTTCAAATTCCATCACTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCTTCTTCCCG
CCGCCGATTTCCTCCCTTTGCCTGCCAAACGCTTCCTGAATCGCACGACACCACCTCCGCTCTGGAAAAATCGTCGGTCGGTCCTGAATCAGCCGGTGACACCACTGGCC
AAGCCGCTAGTTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCGATAATTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCA
AGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTG
GTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGCTTTGCTCCTTCAAATTCCATCACTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCTTCTTCCCG
CCGCCGATTTCCTCCCTTTGCCTGCCAAACGCTTCCTGAATCGCACGACACCACCTCCGCTCTGGAAAAATCGTCGGTCGGTCCTGAATCAGCCGGTGACACCACTGGCC
AAGCCGCTAGTTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCGATAATTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCA
AGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTG
GTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGTAA
Protein sequenceShow/hide protein sequence
MARFAPSNSITLHRIPLCFRIPHPLLQPSAARFPSSRRRFPPFACQTLPESHDTTSALEKSSVGPESAGDTTGQAASSSSNQGFPEFPNKDINRRVAIISTVSALALFSS
SRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFK