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Chy2G033110 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G033110
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description50S ribosomal protein L17
Genome locationchrH02:7154818..7158087
RNA-Seq ExpressionChy2G033110
SyntenyChy2G033110
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000456 - Ribosomal protein L17
IPR036373 - Ribosomal protein L17 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148646.1 uncharacterized protein LOC101221792 [Cucumis sativus]1.66e-10598.11Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGD VLHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEFIDRENELRQSKPP PPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_008441029.1 PREDICTED: 50S ribosomal protein L17 [Cucumis melo]2.27e-10395.6Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAA FVRGD +LHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEF+DRENELRQSKPP PPPPQRPPLDPWTRSRLSKQ APPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_022132421.1 uncharacterized protein LOC111005280 [Momordica charantia]1.11e-9489.31Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRP  HRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKE +L AARRAA FVRGD VLHKLFTELAYRYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEFIDRENELRQSKPP P P Q+ PLDPWTRSRLSKQFAPPKEIKSDSE+
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_022979157.1 uncharacterized protein LOC111478877 [Cucurbita maxima]8.05e-9791.19Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKEG+L AAR AA FVRGD VLHKLFTELAYRYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEFIDRENELRQSKPP P PPQ+ P+DPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

XP_038880926.1 50S ribosomal protein L17 [Benincasa hispida]6.00e-9993.08Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGR   HRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQ GKEGTL AARRAA FVRGD VLHKLFTE+AYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEFIDRENELRQSKPP PPPPQR PLDPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

TrEMBL top hitse value%identityAlignment
A0A0A0KFP7 Uncharacterized protein7.9e-8098.11Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGD VLHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEFIDRENELRQSKPP PPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A1S3B2I7 50S ribosomal protein L173.3e-7895.6Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAA FVRGD +LHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEF+DRENELRQSKPP PPPPQRPPLDPWTRSRLSKQ APPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A5D3DPW3 50S ribosomal protein L173.3e-7895.6Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAA FVRGD +LHKLFTELAYRYKDR GGYTRFLRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEF+DRENELRQSKPP PPPPQRPPLDPWTRSRLSKQ APPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A6J1BS83 uncharacterized protein LOC1110052801.4e-7189.31Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRP  HRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKE +L AARRAA FVRGD VLHKLFTELAYRYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEFIDRENELRQSKPP P P Q+ PLDPWTRSRLSKQFAPPKEIKSDSE+
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

A0A6J1IN09 uncharacterized protein LOC1114788771.9e-7391.19Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKE+RRLADNMVQ GKEG+L AAR AA FVRGD VLHKLFTELAYRYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI
        VGDAAPMAYIEFIDRENELRQSKPP P PPQ+ P+DPWTRSRLSKQFAPPKEIKSDSEI
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI

SwissProt top hitse value%identityAlignment
A0L5Z9 50S ribosomal protein L171.5e-2753.98Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGD-VVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGD
        R+L R  +HR +M++ M+  L KHERIETTV +AKE+R +A+ ++ LGK G L A R+A   + GD  V+HKLFT+LA R KDR GGYTR L+TR R GD
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGD-VVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGD

Query:  AAPMAYIEFIDRE
         APM++IE ++R+
Subjt:  AAPMAYIEFIDRE

A5FZU0 50S ribosomal protein L176.4e-2651.61Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA
        RKLG  A+HR +M R M   L+KHE+I TT+ KAKE+R +A+ ++ LGK G L A R+A   +R DV++ KLF  LA RYK+R GGYTR L+  +R GDA
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA

Query:  APMAYIEFIDRENELR-QSKPPKP
        A MA IE +DR+   + Q   PKP
Subjt:  APMAYIEFIDRENELR-QSKPPKP

C6E4M9 50S ribosomal protein L178.3e-2647.62Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA
        R+LGR  +HR++M R MV+  ++HE+I TT AKAKE+R +A+ M+ LGK G L A R+AA ++R   V+ KLFTE+A RY +R GGYTR ++  IR GD 
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA

Query:  APMAYIEFIDRENELRQ--SKPPKPP
        AP++ +E ++ E + ++  +KP K P
Subjt:  APMAYIEFIDRENELRQ--SKPPKPP

Q39XX8 50S ribosomal protein L171.8e-2547.58Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA
        R+LGR  +HR++M R MV+  ++HERI TT AKAKE+R +A+ M+ LGK G L A R+AA ++R   V+ KLF+ +A RYK+R GGYTR ++  IR GD 
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA

Query:  APMAYIEFIDRE--NELRQSKPPK
        AP++ IE ++ +   + +++KP K
Subjt:  APMAYIEFIDRE--NELRQSKPPK

Q749B4 50S ribosomal protein L176.4e-2643.92Show/hide
Query:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA
        R+LGR  +HR++M R MV+ L  HERI TT AKAKE+R +A+ M+ LGK G L A R+AA ++R   V+ KLF+ +A RYK+R GGYTR ++  IR GD 
Subjt:  RKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDA

Query:  APMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKE
        AP++ IE ++ + E +  K     P Q     P          A P+E
Subjt:  APMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKE

Arabidopsis top hitse value%identityAlignment
AT3G54210.1 Ribosomal protein L17 family protein2.0e-2247.22Show/hide
Query:  KLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDAA
        KL RP   R ++LR + +QL+KH RI+TT A+A  +R+  D M+ L K+G+L   R+A G++    ++H LF E+  RY +R GGYTR +RT  R GD A
Subjt:  KLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDAA

Query:  PMAYIEFI
        PMAYIE +
Subjt:  PMAYIEFI

AT5G09770.1 Ribosomal protein L17 family protein9.3e-7387.5Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPA HRMSMLRTMVSQLVKHERIETTV KAKEVRRLADNM+QLGKEG+LSAARRAAGFVRGD VLHK+FTELA+RYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI
        VGDAAPMAYIEFIDRENELRQSKP  P PPQR PLDPW RSRL++QFAPPKE K  DSE+
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI

AT5G64650.1 Ribosomal protein L17 family protein3.0e-7185Show/hide
Query:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR
        MTKFRKLGRPA HRMSMLRTMVSQLV+HERIETTV KAKEVRRLADNM+QLGKEG+L+AARRAAGFVRGD VLHK+FTELA+RYKDR GGYTR LRTRIR
Subjt:  MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIR

Query:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI
        VGDAAPMAYIEFIDRENELRQSKP  P PP R PLDPW RSRL++Q+APPKE K SDS++
Subjt:  VGDAAPMAYIEFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIK-SDSEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGTTTAGAAAGCTTGGTCGACCTGCTGCACACCGGATGTCCATGCTCAGAACAATGGTTTCTCAGCTGGTGAAGCACGAACGCATTGAGACTACTGTTGCTAA
GGCTAAAGAAGTTCGACGGCTTGCTGATAACATGGTTCAACTGGGAAAAGAGGGTACCCTTTCCGCTGCAAGGCGTGCTGCTGGTTTTGTAAGAGGAGATGTTGTCCTTC
ACAAACTATTCACAGAACTGGCTTATCGATACAAAGATAGAGTTGGTGGATATACAAGATTTCTGCGCACTCGTATACGTGTTGGTGATGCTGCACCAATGGCTTATATT
GAATTTATTGATAGAGAAAATGAGCTCAGACAGTCAAAGCCTCCAAAGCCTCCACCACCTCAGAGGCCTCCATTGGATCCATGGACTAGATCACGGCTTAGCAAACAGTT
CGCACCACCCAAAGAGATCAAATCCGACTCCGAAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAAGTTTAGAAAGCTTGGTCGACCTGCTGCACACCGGATGTCCATGCTCAGAACAATGGTTTCTCAGCTGGTGAAGCACGAACGCATTGAGACTACTGTTGCTAA
GGCTAAAGAAGTTCGACGGCTTGCTGATAACATGGTTCAACTGGGAAAAGAGGGTACCCTTTCCGCTGCAAGGCGTGCTGCTGGTTTTGTAAGAGGAGATGTTGTCCTTC
ACAAACTATTCACAGAACTGGCTTATCGATACAAAGATAGAGTTGGTGGATATACAAGATTTCTGCGCACTCGTATACGTGTTGGTGATGCTGCACCAATGGCTTATATT
GAATTTATTGATAGAGAAAATGAGCTCAGACAGTCAAAGCCTCCAAAGCCTCCACCACCTCAGAGGCCTCCATTGGATCCATGGACTAGATCACGGCTTAGCAAACAGTT
CGCACCACCCAAAGAGATCAAATCCGACTCCGAAATCTAA
Protein sequenceShow/hide protein sequence
MTKFRKLGRPAAHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGTLSAARRAAGFVRGDVVLHKLFTELAYRYKDRVGGYTRFLRTRIRVGDAAPMAYI
EFIDRENELRQSKPPKPPPPQRPPLDPWTRSRLSKQFAPPKEIKSDSEI