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Chy2G033270 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G033270
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationchrH02:7296564..7299301
RNA-Seq ExpressionChy2G033270
SyntenyChy2G033270
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148659.1 photosystem I reaction center subunit N, chloroplastic [Cucumis sativus]1.57e-11498.25Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQ KVPEAKN+GRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_008441057.1 PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo]2.71e-11598.83Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQA+VPEAKNEGRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_022950888.1 photosystem I reaction center subunit N, chloroplastic-like [Cucurbita moschata]4.15e-11093.57Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADL+SK+ A PSVASPGVVGYKLPAIRAQQA+VPEAKN+GRR+ALLYLGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_023518442.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]4.84e-10993.57Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRAQQA+VPEAKNEGRRTALL+LGASLFAAAAA+SNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_038883748.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Benincasa hispida]1.10e-11498.25Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQA+VPEAKNEGRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A0A0KFM1 Uncharacterized protein2.5e-8798.25Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQ KVPEAKN+GRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A1S3B240 photosystem I reaction center subunit N, chloroplastic6.6e-8898.83Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQA+VPEAKNEGRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N6.6e-8898.83Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQA+VPEAKNEGRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A6J1GG47 photosystem I reaction center subunit N, chloroplastic-like5.8e-8493.57Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADL+SK+ A PSVASPGVVGYKLPAIRAQQA+VPEAKN+GRR+ALLYLGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A6J1KNN3 photosystem I reaction center subunit N, chloroplastic isoform X18.3e-8392.98Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRAQQA+VPEAKNEGRRTALL+LGASLFAAAAA+SNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)3.4e-4182.61Show/hide
Query:  SNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        +  SA A + ++YLEKSKANKELNDKKRLATSGANFARAYTVEFG+C+FP NFTGCQDLAKQKKVPFI+DDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic6.6e-4568.53Show/hide
Query:  AVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKF
        AVP  ASP           A++ +V  AK+  RR+ALL L A    AA AAS  SA A V ++YLEKSK NKELNDKKR ATSGANFARAYTV+FG+CKF
Subjt:  AVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKF

Query:  PENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        P NFTGCQDLAKQKKVPFITDDLE+ECEGK+K+KCGSNVFWKW
Subjt:  PENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic4.9e-5665.32Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQAKVPEAK-NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    +   + GRR+A+++L A+LF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQAKVPEAK-NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFI++D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic9.0e-2654.55Show/hide
Query:  AIRAQQAKVPEAK-----------NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT
        A+RAQ AKV  A+           +   R  LL LG  L AAA A    +ANAGV+ED L KS ANK LN+KKRLATS AN AR+ TV  GTC+FPENF 
Subjt:  AIRAQQAKVPEAK-----------NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT

Query:  GCQDLAKQKKVPFITDDLELECEGKDKYKCGS
        GC++LA  K V +I +DL++ECEGKD   CGS
Subjt:  GCQDLAKQKKVPFITDDLELECEGKDKYKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)3.5e-5765.32Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQAKVPEAK-NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    +   + GRR+A+++L A+LF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQAKVPEAK-NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFI++D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)9.5e-3961.11Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQAKVPEAK-NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    +   + GRR+A+++L A+LF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQAKVPEAK-NEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQK
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGCGCTGGATCGGCTGACCTGAACTCTAAACTCACCGCCGTCCCTTCTGTTGCGTCTCCTGG
GGTTGTGGGTTACAAGTTGCCGGCTATTAGAGCTCAACAGGCTAAGGTTCCTGAAGCTAAGAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCTCCCTCTTTG
CTGCTGCTGCGGCTGCCTCTAACTCCTCTGCTAATGCTGGAGTCATTGAAGATTATCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACA
AGTGGGGCAAACTTCGCAAGGGCATACACTGTTGAATTTGGTACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCCAAACAAAAGAAAGTTCCATTTAT
AACTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAACGTCTTCTGGAAATGGATGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGCGCTGGATCGGCTGACCTGAACTCTAAACTCACCGCCGTCCCTTCTGTTGCGTCTCCTGG
GGTTGTGGGTTACAAGTTGCCGGCTATTAGAGCTCAACAGGCTAAGGTTCCTGAAGCTAAGAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCTCCCTCTTTG
CTGCTGCTGCGGCTGCCTCTAACTCCTCTGCTAATGCTGGAGTCATTGAAGATTATCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACA
AGTGGGGCAAACTTCGCAAGGGCATACACTGTTGAATTTGGTACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCCAAACAAAAGAAAGTTCCATTTAT
AACTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAACGTCTTCTGGAAATGGATGAGATGA
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQAKVPEAKNEGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLAT
SGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKWMR