CuGenDBv2

Gene ID	Chy2G034050
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein translocase subunit SecA
Genome location	chrH02:8054434..8058253
RNA-Seq Expression	Chy2G034050
Synteny	Chy2G034050
Gene Ontology terms	NA
InterPro domains	IPR004027 - SEC-C motif

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK10174.1 protein translocase subunit SecA [Cucumis melo var. makuwa]

1.12e-149

95.13

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSRALI  SK+TTWNPNLFFP SSSDHNPHNCYLTLLQSRSIF TTQLHGSWMDKIKGVITGKKT TEGTDISSESFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIA+VENALSKFLWAKEAQKKIEKLKEEGKPLPT+IAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

XP_004135658.1 uncharacterized protein LOC101217561 [Cucumis sativus]

1.00e-161

97.86

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIF TTQLHGSWMDKIKGVI+GKK  TEGTDISSESFTLLRFADELKNARRVGALK 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
        RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV

XP_008450751.1 PREDICTED: protein translocase subunit SecA [Cucumis melo]

1.86e-157

95.3

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSRALI  SK+TTWNPNLFFP SSSDHNPHNCYLTLLQSRSIF TTQLHGSWMDKIKGVITGKKT TEGTDISSESFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIA+VENALSKFLWAKEAQKKIEKLKEEGKPLPT+IAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
        RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV

XP_022932559.1 uncharacterized protein LOC111439055 [Cucurbita moschata]

1.80e-139

85.9

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSR LIN S+  T N NLFFPFSSSD +P NC  TLLQSRSIF TTQL+ SWMDKIKG  TGKK+P+EGT+ISSESFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAK CNCTIA+VEN L+KF+WAKEAQKKIEKLKEEGKP+P ++AEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
        RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT 
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV

XP_038878551.1 protein translocase subunit SecA 1 [Benincasa hispida]

2.23e-149

90.17

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSRALINFSK++TWNPNLFFPFSSSDH+P NC LTLLQSRSIF TTQL+GSWMDKIKGVITGKK+P++GTDISSESFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAK CNCTIA+VEN L+KF+WAK+AQ KIEKLK EGKPLPT+IAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
        RSNLAKSGQ+SRNALCPCGSKKRYKRCCGKDQTV
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWL6 Uncharacterized protein

3.1e-125

97.86

Show/hide

Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIF TTQLHGSWMDKIKGVI+GKK  TEGTDISSESFTLLRFADELKNARRVGALK 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
        RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV

A0A1S3BPC0 protein translocase subunit SecA

5.5e-122

95.3

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSRALI  SK+TTWNPNLFFP SSSDHNPHNCYLTLLQSRSIF TTQLHGSWMDKIKGVITGKKT TEGTDISSESFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIA+VENALSKFLWAKEAQKKIEKLKEEGKPLPT+IAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
        RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV

A0A5D3CG47 Protein translocase subunit SecA

3.5e-116

95.13

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSRALI  SK+TTWNPNLFFP SSSDHNPHNCYLTLLQSRSIF TTQLHGSWMDKIKGVITGKKT TEGTDISSESFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD+TGENIQTSQKQEAAKNCNCTIA+VENALSKFLWAKEAQKKIEKLKEEGKPLPT+IAEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

A0A6J1DQ67 uncharacterized protein LOC111022549

3.6e-105

84.62

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Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSR LIN SKR++WNP+LFFP S+ +        TLLQSRSIF TTQL GSW+DKIKGVITGKK+  +G++ISS+SFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAKNCNCTIAEVENAL+KF+WAKEAQKKIEKL+EEGKPLP +I+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
        RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV

A0A6J1EXB8 uncharacterized protein LOC111439055

3.5e-108

86.27

Show/hide

Query:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH
        MRSSSR LIN S+  T N NLFFPFSSSD +P NC  TLLQSRSIF TTQL+ SWMDKIKG  TGKK+P+EGT+ISSESFTLLRFADELKNARRVGA K 
Subjt:  MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKH

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAK CNCTIA+VEN L+KF+WAKEAQKKIEKLKEEGKP+P ++AEVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT
        RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKRCCGKDQT

SwissProt top hits

e value

%identity

Alignment

A6TLE7 Protein translocase subunit SecA 1

5.9e-04

24.22

Show/hide

Query:  ISSESFTLLRFADELKNARRVGALKHYIVGRSSEATFADAFEKQEAI-----IRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQK
        I   S  L    +E   A R+  L+  IV +  +  + D  +  + +     +R +G  D        + + E     N  I  ++    K+L+  E Q 
Subjt:  ISSESFTLLRFADELKNARRVGALKHYIVGRSSEATFADAFEKQEAI-----IRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQK

Query:  KIEKLKEEGKPLPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGK
        K+E+ K+  KP+  +  +  +          ++ + K  +  RN  CPCGS K+YK+CCG+
Subjt:  KIEKLKEEGKPLPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGK

B5YKT5 Protein translocase subunit SecA

3.5e-04

44.07

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Query:  KLKEEGKPLPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD
        ++KEE +     +A  QK+  S+  D AR  + K  +I RN  CPCGS K+YK+CCGK+
Subjt:  KLKEEGKPLPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD

Arabidopsis top hits

e value

%identity

Alignment

AT3G04950.1 CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).

1.2e-76

73.44

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Query:  QSRSIFYTTQLHGSWMDKIKGVITGKK-TPTEGTDISSESFTLLRFADELKNARRVGALKHYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQ
        Q RSI  T  L+G WMD IKGV TG K TP E +++  E+FTLLRFADELKNARR+G  K YIVGRSSEATFADAFEKQEA+IRYLG  D+TGEN+Q SQ
Subjt:  QSRSIFYTTQLHGSWMDKIKGVITGKK-TPTEGTDISSESFTLLRFADELKNARRVGALKHYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQ

Query:  KQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD
        KQ+AAK+C CTI +VEN LSKF WA++A KK+ +LKE GKPLP N+ E+QK++GS P+DLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD
Subjt:  KQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTTCATCCTCTCGAGCTCTGATAAATTTTTCCAAGAGAACCACTTGGAACCCAAATTTGTTCTTCCCCTTCTCTTCTTCCGATCACAATCCTCATAATTGT
TATTTGACTCTGTTACAATCCCGATCCATATTCTATACGACTCAGCTTCATGGTTCATGGATGGACAAGATCAAGGGAGTTATCACTGGGAAGAAAACTCCTACT
GAAGGAACCGACATCAGCTCCGAGTCCTTTACTCTCCTCAGGTTTGCTGATGAGTTGAAAAATGCCCGGAGAGTGGGAGCACTCAAGCATTATATAGTGGGAAGA
AGTAGTGAAGCAACTTTTGCAGATGCTTTTGAGAAGCAGGAAGCAATTATTCGCTATTTGGGAGGTTTTGATTCCACTGGAGAGAACATCCAAACCAGCCAAAAG
CAAGAAGCAGCAAAAAATTGTAACTGCACGATCGCTGAGGTTGAGAATGCGTTGTCAAAGTTTTTGTGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGCTAAAG
GAAGAAGGAAAACCTTTGCCAACAAACATTGCCGAGGTCCAGAAACTGGTGGGTTCTAATCCATTGGATCTAGCTAGGTCAAATTTGGCCAAGAGTGGCCAAATA
AGCCGGAATGCTCTCTGTCCTTGCGGATCAAAGAAGAGATATAAACGGTGCTGCGGGAAGGATCAAACTGTATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFYTTQLHGSWMDKIKGVITGKKTPTEGTDISSESFTLLRFADELKNARRVGALKHYIVGR
SSEATFADAFEKQEAIIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKPLPTNIAEVQKLVGSNPLDLARSNLAKSGQI
SRNALCPCGSKKRYKRCCGKDQTV

Chy2G034050 (gene) of Cucumber (hystrix) v1 genome