; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy2G035080 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G035080
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTHO complex subunit 6
Genome locationchrH02:9039447..9045152
RNA-Seq ExpressionChy2G035080
SyntenyChy2G035080
Gene Ontology termsGO:0009788 - negative regulation of abscisic acid-activated signaling pathway (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0000347 - THO complex (cellular component)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR042626 - THO complex subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144008.1 THO complex subunit 6 [Cucumis sativus]3.81e-18694.72Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        MLGDATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK         SLLAAEPNCFLQGHDGPTYDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        DNTLLLSCGDDGHIRGWRWRDCTDI VPISLQGSHIEPVMDL+NPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

XP_008450878.1 PREDICTED: THO complex subunit 6 [Cucumis melo]3.63e-18493.96Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        ML DATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK         SLLAAEP+CFLQGHDGPTYDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        DNTLLLSCGDDGHIRGWRWRDCTDI VPI LQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

XP_038880260.1 THO complex subunit 6 isoform X3 [Benincasa hispida]6.30e-17890.19Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        ML DATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIASCISK         SLLAAEP+CFLQGHDGP YDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        +NTLLLSCGDDGHIRGWRWR+CTDI VPI LQGSHIEPVMDLMNPQ+KGPWGALSP+PENNAIA+DAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS +RCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

XP_038880261.1 THO complex subunit 6 isoform X4 [Benincasa hispida]1.10e-17890.19Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        ML DATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIASCISK         SLLAAEP+CFLQGHDGP YDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        +NTLLLSCGDDGHIRGWRWR+CTDI VPI LQGSHIEPVMDLMNPQ+KGPWGALSP+PENNAIA+DAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS +RCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

XP_038880263.1 THO complex subunit 6 isoform X5 [Benincasa hispida]1.22e-17990.19Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        ML DATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIASCISK         SLLAAEP+CFLQGHDGP YDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        +NTLLLSCGDDGHIRGWRWR+CTDI VPI LQGSHIEPVMDLMNPQ+KGPWGALSP+PENNAIA+DAQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS +RCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ2 WD_REPEATS_REGION domain-containing protein5.5e-14794.72Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        MLGDATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK         SLLAAEPNCFLQGHDGPTYDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        DNTLLLSCGDDGHIRGWRWRDCTDI VPISLQGSHIEPVMDL+NPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

A0A1S3BQ99 THO complex subunit 61.8e-14593.96Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        ML DATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK         SLLAAEP+CFLQGHDGPTYDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        DNTLLLSCGDDGHIRGWRWRDCTDI VPI LQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

A0A5A7UQQ6 THO complex subunit 61.8e-14593.96Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        ML DATNW EAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK         SLLAAEP+CFLQGHDGPTYDVKFYDNG
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        DNTLLLSCGDDGHIRGWRWRDCTDI VPI LQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

A0A6J1D376 THO complex subunit 61.4e-13486.04Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        M  DATNW E AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIASCISK         S LAAEP+CFLQGHDGP YDVKFYD+G
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        DNTLLLSCGDDGHIRGWRWR+CTDI +PI  QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSCAYCWDLES K+KMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCKSGKCIQ+IDPAKDKKLKGHFS +RCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

A0A6J1F6F8 THO complex subunit 61.3e-13586.84Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG
        MLGDATNW E AYRES+YKERE+QTRTVFRTAWAPSL+GCPE+IV ASSDGS+ASYSIASCISK         SLLAAEP+CFLQGHDGPTYDVKF+D G
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISK-------PVSLLAAEPNCFLQGHDGPTYDVKFYDNG

Query:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD
        DNTLLLSCGDDGHIRGWRW +CTDI VPI LQGSHIEPVMDLMNPQ+KGPWGALSPIPENNAIAT+AQSGSIFSAAGDSCAYCWDLESGK+KMVFKGHSD
Subjt:  DNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSD

Query:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKD-KKLKGHFSFVRCIALDASESWLA
        YLHCI ARNT+NQIITGSEDGTARIWDCK+GKCIQL+DPAKD KK KG+FS VRCIALDASESWLA
Subjt:  YLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKD-KKLKGHFSFVRCIALDASESWLA

SwissProt top hitse value%identityAlignment
Q5U4D9 THO complex subunit 6 homolog1.8e-2227.23Show/hide
Query:  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIE
        T ++ S++ C + + A ++ G +A +S+++ +S      + +P      HDGP Y +   D      LLS G DG ++GW W +               +
Subjt:  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIE

Query:  PVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLI
           +L   Q   P+     +PE NA+    +  S+  A GD   +  DLE+G      +GH+DY+HC+A R    ++++G EDG  R+WD +  K +Q I
Subjt:  PVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLI

Query:  DPAKDKKLKGHFS--FVRCIALDA
        +  K ++     +  ++ C+A D+
Subjt:  DPAKDKKLKGHFS--FVRCIALDA

Q5XJS5 THO complex subunit 6 homolog8.4e-2025.52Show/hide
Query:  EIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVP
        E+   +VF  +++P    C   + A ++ G +A +S+++ +S   S  + +P      HDGP + +        + LLS G +G I  W W         
Subjt:  EIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVP

Query:  ISLQGSHIEPVMDLMNPQFKGPW------GALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGT
                    +L+    K  W           IPE NA+  + +  ++    GD+  +  D+E+G  K V KGH+DY+HC++ +    +I++G EDG 
Subjt:  ISLQGSHIEPVMDLMNPQFKGPW------GALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGT

Query:  ARIWDCKSGKCIQLIDPAK-DKKLKGHF-SFVRCIALDA
         RIWD ++ + +  I+  K ++  +  F  ++ C+A D+
Subjt:  ARIWDCKSGKCIQLIDPAK-DKKLKGHF-SFVRCIALDA

Q6AY87 THO complex subunit 6 homolog1.8e-2227.23Show/hide
Query:  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIE
        T ++ S++ C + + A ++ G +A +S+++ +S      + +P      HDGP Y +   D      LLS G DG ++GW W +               +
Subjt:  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIE

Query:  PVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLI
           +L   Q   P+     +PE NA+    +  S+  A GD   +  DLE+G      +GH+DY+HC+A R    ++++G EDG  R+WD +  K +Q I
Subjt:  PVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLI

Query:  DPAKDKKLKGHFS--FVRCIALDA
        +  K ++     +  ++ C+A D+
Subjt:  DPAKDKKLKGHFS--FVRCIALDA

Q86W42 THO complex subunit 6 homolog2.1e-2328.12Show/hide
Query:  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIE
        T ++ S++ C + + A ++ G +A +S++S +S      + +P    Q HDGP Y +   D      LLS G DG ++ W W +               +
Subjt:  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIE

Query:  PVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLI
           +L   Q   P+     +PE NA+    +  S+  A GD   +  DLE+G    V +GH+DY+HC+A R    ++++G EDG  R+WD ++ K +Q I
Subjt:  PVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLI

Query:  DPAKDKKLKGHFS--FVRCIALDA
        +  K ++     +  ++ C+A D+
Subjt:  DPAKDKKLKGHFS--FVRCIALDA

Q8L4M1 THO complex subunit 67.7e-9057.52Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIASCISKPVS--------LLAAEPNCFLQGHDGPTYDVKFYD
        M GDATNW E  YRESI KEREI+TRTVFRTAWAP      P+  V ASSDG++A +S+ S +S+  S        ++ AEP   ++ H+GP YDVKFY 
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIASCISKPVS--------LLAAEPNCFLQGHDGPTYDVKFYD

Query:  NGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGH
          ++ LLLSCGDDG +RGW+WR+  +  V + L+ +H++P+++L+NPQ KGPWGALSP+PE NA++ D QSGS+F+AAGDSCAYCWD+ESGK+KM FKGH
Subjt:  NGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGH

Query:  SDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWL
        SDYLH + +R++ +QI+TGSEDGTARIWDCK+GKC+++I  ++DKK +     V  +ALD SESWL
Subjt:  SDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWL

Arabidopsis top hitse value%identityAlignment
AT2G19430.1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 15.5e-9157.52Show/hide
Query:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIASCISKPVS--------LLAAEPNCFLQGHDGPTYDVKFYD
        M GDATNW E  YRESI KEREI+TRTVFRTAWAP      P+  V ASSDG++A +S+ S +S+  S        ++ AEP   ++ H+GP YDVKFY 
Subjt:  MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIASCISKPVS--------LLAAEPNCFLQGHDGPTYDVKFYD

Query:  NGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGH
          ++ LLLSCGDDG +RGW+WR+  +  V + L+ +H++P+++L+NPQ KGPWGALSP+PE NA++ D QSGS+F+AAGDSCAYCWD+ESGK+KM FKGH
Subjt:  NGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGH

Query:  SDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWL
        SDYLH + +R++ +QI+TGSEDGTARIWDCK+GKC+++I  ++DKK +     V  +ALD SESWL
Subjt:  SDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWL

AT2G43770.1 Transducin/WD40 repeat-like superfamily protein2.8e-1031.01Show/hide
Query:  PNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR-DCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGD
        P   L GH    Y +KF  N   TL+ S   D  I  WR   DC +  V   L+G H   ++DL        W               +    I SA+ D
Subjt:  PNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR-DCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGD

Query:  SCAYCWDLESGKVKMVFKGHSDYLH-CIAARNTINQIITGSEDGTARIWDCKSGKCIQ
             WD+E+GK       HS +++ C   R     II+GS+DGTA++WD +    IQ
Subjt:  SCAYCWDLESGKVKMVFKGHSDYLH-CIAARNTINQIITGSEDGTARIWDCKSGKCIQ

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein4.8e-1033.75Show/hide
Query:  IATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKD
        +A  + +  I SA+ D     WD+E+G +     GH++Y  C+      N I++GS D T RIWD  +GKC++++    D
Subjt:  IATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKD

AT5G25150.1 TBP-associated factor 53.3e-1126.92Show/hide
Query:  LQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYC
        L GH GP Y   F   GD   +LS   D  IR W     T +   +     H  PV D    QF  P+G                     S + D  A  
Subjt:  LQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYC

Query:  WDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA
        W ++  +   +  GH   + C+      N I TGS D T R+WD ++G+C+++          GH S V  +A+     ++A
Subjt:  WDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA

AT5G64730.1 Transducin/WD40 repeat-like superfamily protein1.5e-1125.47Show/hide
Query:  LQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYC
        L+GH+G     +F  NGD    L+CG D  IR W         + I    SH   V D                     +   + +    S  GD   Y 
Subjt:  LQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYC

Query:  WDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKC--IQLIDPAKD
        WD+ +G+V   F+GH   ++ +   ++ + +++   D + R+WDC+S     +Q+ID   D
Subjt:  WDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWDCKSGKC--IQLIDPAKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGGGACGCAACGAATTGGGGCGAAGCTGCCTACAGAGAGAGTATATATAAAGAAAGAGAGATTCAAACTCGTACTGTGTTCAGAACTGCATGGGCGCCTTCTTT
AAATGGCTGCCCTGAGACCATTGTGGCTGCATCCAGTGATGGATCCGTTGCCTCGTACTCTATCGCTTCTTGCATCTCTAAGCCCGTAAGTTTGTTAGCAGCAGAGCCTA
ATTGCTTCCTTCAAGGGCACGATGGGCCCACCTATGATGTCAAATTTTACGATAATGGTGACAATACTCTATTACTGAGCTGTGGGGATGATGGTCACATTCGAGGATGG
AGGTGGAGAGATTGTACAGATATAACAGTGCCTATTTCTTTGCAAGGTAGTCATATTGAGCCTGTAATGGACCTGATGAATCCTCAATTCAAAGGTCCTTGGGGAGCTCT
TTCTCCAATCCCTGAAAATAATGCAATTGCTACTGATGCCCAGAGTGGATCCATTTTCTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATTTGGAGAGCGGTAAAG
TTAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGCTGCTCGAAACACTATCAATCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGAT
TGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCTGCTAAGGATAAGAAGCTGAAAGGGCATTTCTCATTTGTTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTT
GGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGGGACGCAACGAATTGGGGCGAAGCTGCCTACAGAGAGAGTATATATAAAGAAAGAGAGATTCAAACTCGTACTGTGTTCAGAACTGCATGGGCGCCTTCTTT
AAATGGCTGCCCTGAGACCATTGTGGCTGCATCCAGTGATGGATCCGTTGCCTCGTACTCTATCGCTTCTTGCATCTCTAAGCCCGTAAGTTTGTTAGCAGCAGAGCCTA
ATTGCTTCCTTCAAGGGCACGATGGGCCCACCTATGATGTCAAATTTTACGATAATGGTGACAATACTCTATTACTGAGCTGTGGGGATGATGGTCACATTCGAGGATGG
AGGTGGAGAGATTGTACAGATATAACAGTGCCTATTTCTTTGCAAGGTAGTCATATTGAGCCTGTAATGGACCTGATGAATCCTCAATTCAAAGGTCCTTGGGGAGCTCT
TTCTCCAATCCCTGAAAATAATGCAATTGCTACTGATGCCCAGAGTGGATCCATTTTCTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATTTGGAGAGCGGTAAAG
TTAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGCTGCTCGAAACACTATCAATCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGAT
TGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCTGCTAAGGATAAGAAGCTGAAAGGGCATTTCTCATTTGTTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTT
GGCATAG
Protein sequenceShow/hide protein sequence
MLGDATNWGEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISKPVSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGW
RWRDCTDITVPISLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIAARNTINQIITGSEDGTARIWD
CKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLA