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Chy2G035260 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G035260
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRep-A_N domain-containing protein
Genome locationchrH02:9198304..9198840
RNA-Seq ExpressionChy2G035260
SyntenyChy2G035260
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0044249 - cellular biosynthetic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD44309.1 TPA_asm: hypothetical protein HUJ06_002539 [Nelumbo nucifera]3.28e-2358.77Show/hide
Query:  MTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGLRVWW--
        MTAP I  +TTPPA +LSKKF  EGE P  AASATSG+T+EAVRAAAV P TAFSL +DR            ++ L DLK G GLKKAS   G  +W   
Subjt:  MTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGLRVWW--

Query:  VNGKAIERAEVEAI
        VNG AIE AEV+AI
Subjt:  VNGKAIERAEVEAI

KAA0055792.1 Replication protein A 70 kDa DNA-binding subunit [Cucumis melo var. makuwa]2.80e-6183.72Show/hide
Query:  MTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGLRVWWVN
        MTAPNIATTT PPAAILSKKFFNEG+TPD AASATSG+TI+A RAAAVIPATAFS  +DR A ILPLEMGA AMGLRDLKEGNGLKKASLESGL V WVN
Subjt:  MTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGLRVWWVN

Query:  GKAIERAEVEAIDGMNW-KVGVMEDFVEN
        GKAIE AEVEAIDGM W +V  +EDFVEN
Subjt:  GKAIERAEVEAIDGMNW-KVGVMEDFVEN

KAG6590026.1 hypothetical protein SDJN03_15449, partial [Cucurbita argyrosperma subsp. sororia]4.34e-3468.47Show/hide
Query:  IATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKE---GNGLKKASLESGLRVWWVNGK
        +ATTT PPAA+LSKKFF++GETP  AASATSG+TI+AVRAAAV P  AFS K+DR A  LPL++GA AM LRDL+E   GNGLKKA L+S L V  VNG+
Subjt:  IATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKE---GNGLKKASLESGLRVWWVNGK

Query:  AIERAEVEAID
        A E  EVEAID
Subjt:  AIERAEVEAID

OWM77286.1 hypothetical protein CDL15_Pgr028923 [Punica granatum]1.06e-2356.59Show/hide
Query:  LRFTGSKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLR-DLKEGNGLKKA
        +R TGSK ATP+TAP I  +TTPPA IL +KF  EG+TPD AASATSG+TIEAVRAAAV P  AFSL+E   +   P +  A   GL  D   G+GLKK 
Subjt:  LRFTGSKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLR-DLKEGNGLKKA

Query:  SL-----ESGLRVWWVNGKAIERAEVEAI
        S      E  +    VNG AIE AEVEAI
Subjt:  SL-----ESGLRVWWVNGKAIERAEVEAI

RXI06133.1 hypothetical protein DVH24_018175 [Malus domestica]5.50e-2359.17Show/hide
Query:  SKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGL
        SK ATP TAP I TTTTPPAA+LSKKF  EGETP+ AASATSG+TIEAV AAAVIP TAFS KE      LPL+  A      +   G GL K S E  +
Subjt:  SKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGL

Query:  RVW--WVNGKAIERAEVEAI
          W   VNG AI  A V AI
Subjt:  RVW--WVNGKAIERAEVEAI

TrEMBL top hitse value%identityAlignment
A0A218WXK4 Rep-A_N domain-containing protein6.1e-2056.59Show/hide
Query:  LRFTGSKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGL-RDLKEGNGLKKA
        +R TGSK ATP+TAP I  +TTPPA IL +KF  EG+TPD AASATSG+TIEAVRAAAV P  AFSL+E   +   P +  A   GL  D   G+GLKK 
Subjt:  LRFTGSKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGL-RDLKEGNGLKKA

Query:  S-----LESGLRVWWVNGKAIERAEVEAI
        S      E  +    VNG AIE AEVEAI
Subjt:  S-----LESGLRVWWVNGKAIERAEVEAI

A0A498HYV1 Rep-A_N domain-containing protein8.7e-1959.84Show/hide
Query:  SKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEM-GAEAMGLRDLK-EGNGLKKASLES
        SK  TP TAP I T TTPPAAILSKKFF EGETP+ AASATSG+TIEAV AAAVIP TAFS  E    R LPL+   A A     L   G+GLKK   E 
Subjt:  SKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEM-GAEAMGLRDLK-EGNGLKKASLES

Query:  GLRVW--WVNGKAIERAEVEAI
         +  W   VNG AI  A V+AI
Subjt:  GLRVW--WVNGKAIERAEVEAI

A0A498KLC5 Rep-A_N domain-containing protein2.3e-1959.17Show/hide
Query:  SKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGL
        SK ATP TAP I TTTTPPAA+LSKKF  EGETP+ AASATSG+TIEAV AAAVIP TAFS KE      LPL+  A      +   G GL K S E  +
Subjt:  SKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGL

Query:  RVW--WVNGKAIERAEVEAI
          W   VNG AI  A V AI
Subjt:  RVW--WVNGKAIERAEVEAI

A0A5A7UIW0 Replication protein A 70 kDa DNA-binding subunit1.5e-4783.72Show/hide
Query:  MTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGLRVWWVN
        MTAPNIATTT PPAAILSKKFFNEG+TPD AASATSG+TI+A RAAAVIPATAFS  +DR A ILPLEMGA AMGLRDLKEGNGLKKASLESGL V WVN
Subjt:  MTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGLRVWWVN

Query:  GKAIERAEVEAIDGMNW-KVGVMEDFVEN
        GKAIE AEVEAIDGM W +V  +EDFVEN
Subjt:  GKAIERAEVEAIDGMNW-KVGVMEDFVEN

A0A7J7DQ36 Uncharacterized protein6.9e-1672.06Show/hide
Query:  RFTGSKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKE
        R TGSKFATP TAP +AT+TTPPAA+LSKK   +GETP++AASATSG+T+EAV+AAAV P  AFS KE
Subjt:  RFTGSKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCGCTTCACCGGGTCAAAGTTCGCGACGCCGATGACGGCCCCCAATATCGCCACGACCACCACTCCACCTGCCGCAATACTCAGCAAGAAGTTCTTCAACGAGGGCGA
GACTCCGGATTCGGCAGCCTCGGCAACCTCTGGAATGACCATCGAGGCGGTGAGAGCAGCAGCAGTGATTCCAGCAACAGCCTTCTCCTTGAAGGAAGATCGAAGGGCGA
GGATCCTTCCGTTGGAGATGGGAGCAGAAGCGATGGGCTTGCGGGACTTAAAAGAGGGCAATGGGTTGAAGAAAGCGTCGTTGGAGAGTGGCTTGCGGGTGTGGTGGGTG
AATGGTAAGGCCATTGAAAGAGCGGAAGTGGAAGCCATTGATGGGATGAATTGGAAGGTTGGGGTAATGGAGGATTTTGTGGAAAATTGTTGGGAAGATGAGAATTGGGG
ATTAGGGGATTTTTGGGAAAGGGGTGTGGGCCAAGTGAAGAAGAAGCGGAGGGAGTTGGAGATTGTTGGTGAGGTTGAAATCTTGATCTTGGTCTGA
mRNA sequenceShow/hide mRNA sequence
CTTCGCTTCACCGGGTCAAAGTTCGCGACGCCGATGACGGCCCCCAATATCGCCACGACCACCACTCCACCTGCCGCAATACTCAGCAAGAAGTTCTTCAACGAGGGCGA
GACTCCGGATTCGGCAGCCTCGGCAACCTCTGGAATGACCATCGAGGCGGTGAGAGCAGCAGCAGTGATTCCAGCAACAGCCTTCTCCTTGAAGGAAGATCGAAGGGCGA
GGATCCTTCCGTTGGAGATGGGAGCAGAAGCGATGGGCTTGCGGGACTTAAAAGAGGGCAATGGGTTGAAGAAAGCGTCGTTGGAGAGTGGCTTGCGGGTGTGGTGGGTG
AATGGTAAGGCCATTGAAAGAGCGGAAGTGGAAGCCATTGATGGGATGAATTGGAAGGTTGGGGTAATGGAGGATTTTGTGGAAAATTGTTGGGAAGATGAGAATTGGGG
ATTAGGGGATTTTTGGGAAAGGGGTGTGGGCCAAGTGAAGAAGAAGCGGAGGGAGTTGGAGATTGTTGGTGAGGTTGAAATCTTGATCTTGGTCTGA
Protein sequenceShow/hide protein sequence
LRFTGSKFATPMTAPNIATTTTPPAAILSKKFFNEGETPDSAASATSGMTIEAVRAAAVIPATAFSLKEDRRARILPLEMGAEAMGLRDLKEGNGLKKASLESGLRVWWV
NGKAIERAEVEAIDGMNWKVGVMEDFVENCWEDENWGLGDFWERGVGQVKKKRRELEIVGEVEILILV