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Chy2G035280 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy2G035280
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein ELF4-LIKE
Genome locationchrH02:9208313..9208631
RNA-Seq ExpressionChy2G035280
SyntenyChy2G035280
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021961.1 Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma]3.08e-6296.23Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSG+GS+ QIDSKILQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

XP_004144022.1 protein ELF4-LIKE 4 [Cucumis sativus]5.19e-65100Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

XP_022147541.1 protein ELF4-LIKE 4 [Momordica charantia]3.78e-5892.45Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGS  QID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

XP_022933909.1 protein ELF4-LIKE 4-like [Cucurbita moschata]2.89e-6296.23Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSG+GS+ QIDSKILQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

XP_022961237.1 protein ELF4-LIKE 4-like [Cucurbita moschata]2.47e-6398.11Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSS QID+KILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

TrEMBL top hitse value%identityAlignment
A0A0A0M235 Elf4 domain-containing protein6.3e-49100Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

A0A1S3BQA6 protein ELF4-LIKE 46.3e-49100Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

A0A5D3CFE9 Protein ELF4-LIKE 4-like isoform X26.3e-49100Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

A0A6J1H9N1 protein ELF4-LIKE 4-like1.2e-4798.11Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSS QID+KILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

A0A6J1JGF0 protein ELF4-LIKE 4-like1.2e-4798.11Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGDTFSGLGSS QID+KILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 41.9e-1342.17Show/hide
Query:  DSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG
        D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+ SF+        G   G
Subjt:  DSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG

O80877 Protein ELF4-LIKE 19.2e-1339Show/hide
Query:  EGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSME----VSSEGDSS
        E D      S+   D ++  T    F + Q  LDQN+ LI  +N+NH S+IPDN++RNVGLI E+N NI +V+++Y+DLS +F +  +     + +GD++
Subjt:  EGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSME----VSSEGDSS

Q570U6 Protein ELF4-LIKE 41.7e-3572.64Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGD  SG G    +D K+LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG L
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

Q8S8F5 Protein ELF4-LIKE 31.6e-3376.53Show/hide
Query:  MEGDTFSG-LGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS
        MEGDT S  +GS  Q+D KILQTF+K+FVQVQNILD N+LLI+EINQNHESKIPDNL RNVGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Subjt:  MEGDTFSG-LGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS

Q94BS8 Protein ELF4-LIKE 21.5e-3471.7Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGD +SG G   Q+D K+LQ FQK+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G L
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 41.2e-3672.64Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGD  SG G    +D K+LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG L
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

AT1G17455.2 ELF4-like 41.2e-3672.64Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGD  SG G    +D K+LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG L
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

AT1G72630.1 ELF4-like 21.0e-3571.7Show/hide
Query:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL
        MEGD +SG G   Q+D K+LQ FQK+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G L
Subjt:  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAL

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

AT2G06255.1 ELF4-like 31.1e-3476.53Show/hide
Query:  MEGDTFSG-LGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS
        MEGDT S  +GS  Q+D KILQTF+K+FVQVQNILD N+LLI+EINQNHESKIPDNL RNVGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Subjt:  MEGDTFSG-LGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS

AT2G40080.1 Protein of unknown function (DUF1313)1.3e-1442.17Show/hide
Query:  DSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG
        D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+ SF+        G   G
Subjt:  DSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGATACATTTTCGGGGCTTGGGAGTAGTCCACAGATTGATAGCAAGATTTTACAAACATTTCAGAAGAATTTTGTTCAAGTTCAAAACATATTGGATCAAAA
CAAGCTGCTTATTAGTGAGATAAACCAGAATCACGAGTCAAAAATCCCGGACAATCTTAACAGAAATGTGGGTCTGATCAGAGAATTAAACAACAATATCAGGAGGGTTG
TTGACTTATATGCTGATCTTTCATGTTCATTCACCAGATCCATGGAAGTTTCTTCTGAAGGTGATTCAAGTGGAGCTTTGAAATCAGATGGAAAAGCAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTGATACATTTTCGGGGCTTGGGAGTAGTCCACAGATTGATAGCAAGATTTTACAAACATTTCAGAAGAATTTTGTTCAAGTTCAAAACATATTGGATCAAAA
CAAGCTGCTTATTAGTGAGATAAACCAGAATCACGAGTCAAAAATCCCGGACAATCTTAACAGAAATGTGGGTCTGATCAGAGAATTAAACAACAATATCAGGAGGGTTG
TTGACTTATATGCTGATCTTTCATGTTCATTCACCAGATCCATGGAAGTTTCTTCTGAAGGTGATTCAAGTGGAGCTTTGAAATCAGATGGAAAAGCAG
Protein sequenceShow/hide protein sequence
MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAX